Gene annotation
Transcriptome id Sobic.007G205500.1,Sobic.007G205500.2
Synonym Sb07g027290
Functional annotation expressed protein
UniProt C5YIM6 , A0A1Z5RBN2
Pfam PF09366
Panther DB PTHR34131 PTHR34131:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G31115 : Protein of unknown function (DUF1997)
RAP-DB (Rice) LOC_Os08g41040.1 : expressed protein
MaizeGDB (Corn) Zm00025a005136
Brachypodium KQJ98977 , KQJ98976
Barley HORVU7Hr1G051600.5 , HORVU7Hr1G051600.4 , HORVU7Hr1G051600.6 , HORVU7Hr1G051600.1 , HORVU7Hr1G051600.3 , HORVU7Hr1G051600.2
Wheat TraesCS7B02G140500 , TraesCS7D02G249300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G299900 expressed protein -
2 Sobic.004G309400 DCL, chloroplast precursor, putative, expressed -
3 Sobic.006G067400 Ser/Thr protein phosphatase family protein, putative, expressed -
4 Sobic.001G413600 expressed protein -
5 Sobic.004G020300 expressed protein -
6 Sobic.002G227700 gibberellin receptor GID1L2, putative, expressed -
7 Sobic.006G021600 uncharacterized membrane protein, putative, expressed -
8 Sobic.007G004700 Ferredoxin-1(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
9 Sobic.001G314200 expressed protein -
10 Sobic.001G405700 - -
11 Sobic.003G077400 peptidase M50 family protein, putative, expressed -
12 Sobic.003G022300 SOUL heme-binding protein, putative, expressed -
13 Sobic.002G274200 expressed protein -
14 Sobic.010G160700 PEPC(PubMedID : 19549309)@"C4 PTPC , photosynthetic C4 gene"(PubMedID : 2308851)@phosphoenolpyruvate carboxylase 2(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
15 Sobic.001G010100 ankyrin repeat domain containing protein, expressed -
16 Sobic.009G210200 Acid phosphatase/vanadium-dependent haloperoxidase-related protein(PubMedID : 26465154)@Divergent PAP2 family domain containing protein, expressed -
17 Sobic.006G127300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.005G194100 expressed protein -
19 Sobic.009G030900 bundle sheath defective protein 2, putative, expressed -
20 Sobic.010G005500 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase


Gene co-expression network
sample Sobic007G205500 Sobic007G205500 Sobic002G299900 Sobic002G299900 Sobic007G205500--Sobic002G299900 Sobic004G309400 Sobic004G309400 Sobic007G205500--Sobic004G309400 Sobic006G067400 Sobic006G067400 Sobic007G205500--Sobic006G067400 Sobic001G413600 Sobic001G413600 Sobic007G205500--Sobic001G413600 Sobic004G020300 Sobic004G020300 Sobic007G205500--Sobic004G020300 Sobic002G227700 Sobic002G227700 Sobic007G205500--Sobic002G227700 Sobic006G021600 Sobic006G021600 Sobic007G205500--Sobic006G021600 Sobic007G004700 Sobic007G004700 Sobic007G205500--Sobic007G004700 Sobic001G314200 Sobic001G314200 Sobic007G205500--Sobic001G314200 Sobic002G299900--Sobic007G205500 Sobic002G299900--Sobic001G314200 Sobic002G299900--Sobic006G067400 Sobic005G116100 Sobic005G116100 Sobic002G299900--Sobic005G116100 Sobic008G171300 Sobic008G171300 Sobic002G299900--Sobic008G171300 Sobic004G343900 Sobic004G343900 Sobic002G299900--Sobic004G343900 Sobic005G194100 Sobic005G194100 Sobic002G299900--Sobic005G194100 Sobic006G054300 Sobic006G054300 Sobic002G299900--Sobic006G054300 Sobic002G299900--Sobic004G020300 Sobic004G309400--Sobic007G004700 Sobic009G131800 Sobic009G131800 Sobic004G309400--Sobic009G131800 Sobic001G083100 Sobic001G083100 Sobic004G309400--Sobic001G083100 Sobic004G309400--Sobic007G205500 Sobic004G309400--Sobic001G413600 Sobic001G175700 Sobic001G175700 Sobic004G309400--Sobic001G175700 Sobic002G272100 Sobic002G272100 Sobic004G309400--Sobic002G272100 Sobic004G309400--Sobic006G021600 Sobic004G309400--Sobic006G067400 Sobic008G188600 Sobic008G188600 Sobic006G067400--Sobic008G188600 Sobic006G067400--Sobic008G171300 Sobic009G059300 Sobic009G059300 Sobic006G067400--Sobic009G059300 Sobic009G043000 Sobic009G043000 Sobic006G067400--Sobic009G043000 Sobic006G067400--Sobic001G314200 Sobic007G052400 Sobic007G052400 Sobic006G067400--Sobic007G052400 Sobic009G210200 Sobic009G210200 Sobic006G067400--Sobic009G210200 Sobic009G030900 Sobic009G030900 Sobic006G067400--Sobic009G030900 Sobic007G225500 Sobic007G225500 Sobic006G067400--Sobic007G225500 Sobic003G077400 Sobic003G077400 Sobic001G413600--Sobic003G077400 Sobic001G469933 Sobic001G469933 Sobic001G413600--Sobic001G469933 Sobic001G413600--Sobic009G030900 Sobic010G277600 Sobic010G277600 Sobic001G413600--Sobic010G277600 Sobic001G413600--Sobic006G021600 Sobic001G104800 Sobic001G104800 Sobic001G413600--Sobic001G104800 Sobic001G413600--Sobic007G052400 Sobic001G413600--Sobic006G067400 Sobic001G413600--Sobic002G272100 Sobic004G020300--Sobic009G131800 Sobic004G020300--Sobic009G210200 Sobic004G020300--Sobic002G272100 Sobic001G405700 Sobic001G405700 Sobic004G020300--Sobic001G405700 Sobic002G267900 Sobic002G267900 Sobic004G020300--Sobic002G267900 Sobic008G172700 Sobic008G172700 Sobic004G020300--Sobic008G172700 Sobic004G343000 Sobic004G343000 Sobic004G020300--Sobic004G343000 Sobic004G020300--Sobic006G021600 Sobic003G022300 Sobic003G022300 Sobic004G020300--Sobic003G022300 Sobic002G227700--Sobic005G194100 Sobic002G227700--Sobic001G405700 Sobic010G160700 Sobic010G160700 Sobic002G227700--Sobic010G160700 Sobic002G227700--Sobic009G030900 Sobic001G417200 Sobic001G417200 Sobic002G227700--Sobic001G417200 Sobic003G433900 Sobic003G433900 Sobic002G227700--Sobic003G433900 Sobic002G227700--Sobic003G022300 Sobic003G387800 Sobic003G387800 Sobic002G227700--Sobic003G387800 Sobic004G227200 Sobic004G227200 Sobic002G227700--Sobic004G227200 Sobic001G368500 Sobic001G368500 Sobic006G021600--Sobic001G368500 Sobic003G432500 Sobic003G432500 Sobic006G021600--Sobic003G432500 Sobic002G274200 Sobic002G274200 Sobic006G021600--Sobic002G274200 Sobic006G021600--Sobic001G469933 Sobic006G021600--Sobic002G272100 Sobic006G021600--Sobic003G077400 Sobic003G324700 Sobic003G324700 Sobic006G021600--Sobic003G324700 Sobic008G073100 Sobic008G073100 Sobic006G021600--Sobic008G073100 Sobic001G122400 Sobic001G122400 Sobic006G021600--Sobic001G122400 Sobic007G004700--Sobic004G309400 Sobic001G035800 Sobic001G035800 Sobic007G004700--Sobic001G035800 Sobic007G004700--Sobic001G175700 Sobic007G004700--Sobic007G205500 Sobic007G004700--Sobic001G083100 Sobic007G004700--Sobic001G405700 Sobic003G254600 Sobic003G254600 Sobic007G004700--Sobic003G254600 Sobic007G004700--Sobic003G022300 Sobic009G174700 Sobic009G174700 Sobic007G004700--Sobic009G174700 Sobic003G412900 Sobic003G412900 Sobic001G314200--Sobic003G412900 Sobic001G314200--Sobic009G030900 Sobic001G069000 Sobic001G069000 Sobic001G314200--Sobic001G069000 Sobic001G314200--Sobic006G067400 Sobic003G387100 Sobic003G387100 Sobic001G314200--Sobic003G387100 Sobic006G093900 Sobic006G093900 Sobic001G314200--Sobic006G093900 Sobic001G314200--Sobic009G059300 Sobic001G314200--Sobic008G171300 Sobic001G314200--Sobic008G188600
Octagon: transcription factors


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