Gene annotation
Transcriptome id Sobic.001G413600.1
Synonym Sb01g038960
Functional annotation expressed protein
UniProt A0A1B6QP13
Pfam -
Panther DB PTHR14154:SF15 PTHR14154
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G12345 : -
RAP-DB (Rice) LOC_Os06g28950.1 : expressed protein
MaizeGDB (Corn) Zm00025a052718
Brachypodium KQK22248
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G077400 peptidase M50 family protein, putative, expressed -
2 Sobic.001G469933 - K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
3 Sobic.009G030900 bundle sheath defective protein 2, putative, expressed -
4 Sobic.010G277600 - -
5 Sobic.006G021600 uncharacterized membrane protein, putative, expressed -
6 Sobic.001G104800 expressed protein -
7 Sobic.007G052400 rubredoxin family protein, putative, expressed -
8 Sobic.006G067400 Ser/Thr protein phosphatase family protein, putative, expressed -
9 Sobic.002G272100 expressed protein -
10 Sobic.007G205500 expressed protein -
11 Sobic.001G405700 - -
12 Sobic.004G309400 DCL, chloroplast precursor, putative, expressed -
13 Sobic.009G183700 XP_002441313.1 plastidic phosphoglycerate kinase(PubMedID : 26904072)@phosphoglycerate kinase(PubMedID : 29017446)@phosphoglycerate kinase protein, putative, expressed K00927: PGK, phosphoglycerate kinase
14 Sobic.002G405100 elongation factor TS family protein, expressed K02357: tsf, elongation factor Ts
15 Sobic.008G171300 methyltransferase domain containing protein, putative, expressed K12502: VTE3, MPBQ/MSBQ methyltransferase
16 Sobic.001G368500 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
17 Sobic.002G401800 bifunctional thioredoxin reductase/thioredoxin, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
18 Sobic.002G274200 expressed protein -
19 Sobic.004G012900 expressed protein -
20 Sobic.004G239100 -(PubMedID : 26465154)@expressed protein -


Gene co-expression network
sample Sobic001G413600 Sobic001G413600 Sobic003G077400 Sobic003G077400 Sobic001G413600--Sobic003G077400 Sobic001G469933 Sobic001G469933 Sobic001G413600--Sobic001G469933 Sobic009G030900 Sobic009G030900 Sobic001G413600--Sobic009G030900 Sobic010G277600 Sobic010G277600 Sobic001G413600--Sobic010G277600 Sobic006G021600 Sobic006G021600 Sobic001G413600--Sobic006G021600 Sobic001G104800 Sobic001G104800 Sobic001G413600--Sobic001G104800 Sobic007G052400 Sobic007G052400 Sobic001G413600--Sobic007G052400 Sobic006G067400 Sobic006G067400 Sobic001G413600--Sobic006G067400 Sobic002G272100 Sobic002G272100 Sobic001G413600--Sobic002G272100 Sobic003G077400--Sobic001G469933 Sobic008G073100 Sobic008G073100 Sobic003G077400--Sobic008G073100 Sobic005G110400 Sobic005G110400 Sobic003G077400--Sobic005G110400 Sobic004G012900 Sobic004G012900 Sobic003G077400--Sobic004G012900 Sobic001G368500 Sobic001G368500 Sobic003G077400--Sobic001G368500 Sobic002G401800 Sobic002G401800 Sobic003G077400--Sobic002G401800 Sobic003G387100 Sobic003G387100 Sobic003G077400--Sobic003G387100 Sobic003G160800 Sobic003G160800 Sobic003G077400--Sobic003G160800 Sobic004G336200 Sobic004G336200 Sobic003G077400--Sobic004G336200 Sobic001G122400 Sobic001G122400 Sobic001G469933--Sobic001G122400 Sobic001G469933--Sobic001G368500 Sobic003G324700 Sobic003G324700 Sobic001G469933--Sobic003G324700 Sobic001G469933--Sobic003G077400 Sobic006G055800 Sobic006G055800 Sobic001G469933--Sobic006G055800 Sobic003G432500 Sobic003G432500 Sobic001G469933--Sobic003G432500 Sobic004G335800 Sobic004G335800 Sobic001G469933--Sobic004G335800 Sobic001G083100 Sobic001G083100 Sobic001G469933--Sobic001G083100 Sobic001G469933--Sobic005G110400 Sobic010G005500 Sobic010G005500 Sobic009G030900--Sobic010G005500 Sobic009G030900--Sobic010G277600 Sobic009G030900--Sobic007G052400 Sobic009G183700 Sobic009G183700 Sobic009G030900--Sobic009G183700 Sobic003G387800 Sobic003G387800 Sobic009G030900--Sobic003G387800 Sobic009G059300 Sobic009G059300 Sobic009G030900--Sobic009G059300 Sobic003G002300 Sobic003G002300 Sobic009G030900--Sobic003G002300 Sobic008G171300 Sobic008G171300 Sobic009G030900--Sobic008G171300 Sobic004G175500 Sobic004G175500 Sobic009G030900--Sobic004G175500 Sobic010G277600--Sobic009G183700 Sobic010G277600--Sobic009G030900 Sobic010G277600--Sobic010G005500 Sobic010G277600--Sobic007G052400 Sobic004G239100 Sobic004G239100 Sobic010G277600--Sobic004G239100 Sobic010G277600--Sobic004G012900 Sobic002G277100 Sobic002G277100 Sobic010G277600--Sobic002G277100 Sobic007G004600 Sobic007G004600 Sobic010G277600--Sobic007G004600 Sobic007G173800 Sobic007G173800 Sobic010G277600--Sobic007G173800 Sobic006G021600--Sobic001G368500 Sobic006G021600--Sobic003G432500 Sobic002G274200 Sobic002G274200 Sobic006G021600--Sobic002G274200 Sobic006G021600--Sobic001G469933 Sobic006G021600--Sobic002G272100 Sobic006G021600--Sobic003G077400 Sobic006G021600--Sobic003G324700 Sobic006G021600--Sobic008G073100 Sobic006G021600--Sobic001G122400 Sobic001G291900 Sobic001G291900 Sobic001G104800--Sobic001G291900 Sobic001G104800--Sobic009G030900 Sobic001G104800--Sobic001G368500 Sobic001G104800--Sobic001G469933 Sobic001G104800--Sobic001G122400 Sobic001G104800--Sobic003G324700 Sobic001G104800--Sobic004G335800 Sobic007G090400 Sobic007G090400 Sobic001G104800--Sobic007G090400 Sobic002G152800 Sobic002G152800 Sobic001G104800--Sobic002G152800 Sobic007G052400--Sobic010G005500 Sobic007G052400--Sobic003G002300 Sobic007G052400--Sobic004G012900 Sobic007G052400--Sobic008G171300 Sobic007G225500 Sobic007G225500 Sobic007G052400--Sobic007G225500 Sobic007G052400--Sobic009G183700 Sobic007G052400--Sobic009G030900 Sobic008G102000 Sobic008G102000 Sobic007G052400--Sobic008G102000 Sobic002G233700 Sobic002G233700 Sobic007G052400--Sobic002G233700 Sobic008G188600 Sobic008G188600 Sobic006G067400--Sobic008G188600 Sobic006G067400--Sobic008G171300 Sobic006G067400--Sobic009G059300 Sobic009G043000 Sobic009G043000 Sobic006G067400--Sobic009G043000 Sobic001G314200 Sobic001G314200 Sobic006G067400--Sobic001G314200 Sobic006G067400--Sobic007G052400 Sobic009G210200 Sobic009G210200 Sobic006G067400--Sobic009G210200 Sobic006G067400--Sobic009G030900 Sobic006G067400--Sobic007G225500 Sobic002G272100--Sobic002G401800 Sobic002G272100--Sobic008G073100 Sobic002G272100--Sobic001G368500 Sobic008G050400 Sobic008G050400 Sobic002G272100--Sobic008G050400 Sobic008G039600 Sobic008G039600 Sobic002G272100--Sobic008G039600 Sobic002G351600 Sobic002G351600 Sobic002G272100--Sobic002G351600 Sobic002G267900 Sobic002G267900 Sobic002G272100--Sobic002G267900 Sobic002G272100--Sobic001G083100 Sobic002G272100--Sobic005G110400
Octagon: transcription factors


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