Gene annotation
Transcriptome id Sobic.007G208600.1
Synonym PIRL4, Sb07g027580
Functional annotation leucine rich repeat containing protein, expressed
UniProt C5YIQ2
Pfam PF13855
Panther DB PTHR23155 PTHR23155:SF511
NCBI CDD KOG0617; Ras suppressor protein (contains leucine-rich repeats)
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G35470 : plant intracellular ras group-related LRR 4
RAP-DB (Rice) LOC_Os08g40090.1 : leucine rich repeat containing protein, expressed
MaizeGDB (Corn) Zm00025a005115
Brachypodium PNT68401 , KQJ98943
Barley -
Wheat TraesCS7D02G246700 , TraesCS7D02G246700 , TraesCS7D02G246700 , TraesCS7B02G143600 , TraesCS7B02G143600 , TraesCS7B02G143600
Populus -


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cDNA sequences
Sobic.007G208600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G211500 "GA biosynthetic gene, causes dwarfism accompanied by unusual culm bending in the mutants"(PubMedID : 24924234)@ent-kaurene synthase, chloroplast precursor, putative, expressed K04121: ent-kaurene synthase
2 Sobic.010G189000 protein with a conserved N-terminal region, putative, expressed -
3 Sobic.008G153000 MATH domain containing protein, expressed -
4 Sobic.006G046700 vacuolar protein sorting-associated protein 11, putative, expressed -
5 Sobic.001G252700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLA2 - cellulose synthase-like family A@ mannan synthase, expressed K13680: beta-mannan synthase
6 Sobic.002G260400 - -
7 Sobic.001G080900 heat shock protein DnaJ, putative, expressed -
8 Sobic.004G246100 nicalin, putative, expressed K06171: nicastrin
9 Sobic.005G118600 NB-ARC domain containing protein, expressed -
10 Sobic.005G225400 expressed protein -
11 Sobic.006G058600 AML1, putative, expressed -
12 Sobic.008G058800 OsFBX369 - F-box domain containing protein, expressed -
13 Sobic.007G026000 ATBET9, putative, expressed -
14 Sobic.001G413900 "Ca ATPase, IIB type"(PubMedID : 22196357)@calcium-transporting ATPase, endoplasmic reticulum-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
15 Sobic.009G137100 bZIP transcription factor domain containing protein, expressed -
16 Sobic.002G370900 OsPOP16 - Putative Prolyl Oligopeptidase homologue, expressed K06889: uncharacterized protein
17 Sobic.002G063900 zinc ion binding protein, putative, expressed -
18 Sobic.006G116100 RNA recognition motif containing protein, putative, expressed -
19 Sobic.004G271000 expressed protein -
20 Sobic.009G260650 - -


Gene co-expression network
sample Sobic007G208600 Sobic007G208600 Sobic006G211500 Sobic006G211500 Sobic007G208600--Sobic006G211500 Sobic010G189000 Sobic010G189000 Sobic007G208600--Sobic010G189000 Sobic008G153000 Sobic008G153000 Sobic007G208600--Sobic008G153000 Sobic006G046700 Sobic006G046700 Sobic007G208600--Sobic006G046700 Sobic001G252700 Sobic001G252700 Sobic007G208600--Sobic001G252700 Sobic002G260400 Sobic002G260400 Sobic007G208600--Sobic002G260400 Sobic001G080900 Sobic001G080900 Sobic007G208600--Sobic001G080900 Sobic004G246100 Sobic004G246100 Sobic007G208600--Sobic004G246100 Sobic005G118600 Sobic005G118600 Sobic007G208600--Sobic005G118600 Sobic006G211500--Sobic010G189000 Sobic006G211500--Sobic007G208600 Sobic006G211500--Sobic006G046700 Sobic006G211500--Sobic001G252700 Sobic005G225400 Sobic005G225400 Sobic006G211500--Sobic005G225400 Sobic002G288000 Sobic002G288000 Sobic006G211500--Sobic002G288000 Sobic006G211500--Sobic004G246100 Sobic006G211500--Sobic008G153000 Sobic007G095200 Sobic007G095200 Sobic006G211500--Sobic007G095200 Sobic006G028200 Sobic006G028200 Sobic010G189000--Sobic006G028200 Sobic007G079200 Sobic007G079200 Sobic010G189000--Sobic007G079200 Sobic001G094000 Sobic001G094000 Sobic010G189000--Sobic001G094000 Sobic009G040700 Sobic009G040700 Sobic010G189000--Sobic009G040700 Sobic006G183800 Sobic006G183800 Sobic010G189000--Sobic006G183800 Sobic010G189000--Sobic002G288000 Sobic004G282400 Sobic004G282400 Sobic010G189000--Sobic004G282400 Sobic010G189000--Sobic006G046700 Sobic004G061900 Sobic004G061900 Sobic010G189000--Sobic004G061900 Sobic006G116100 Sobic006G116100 Sobic008G153000--Sobic006G116100 Sobic008G153000--Sobic006G046700 Sobic008G149800 Sobic008G149800 Sobic008G153000--Sobic008G149800 Sobic002G264200 Sobic002G264200 Sobic008G153000--Sobic002G264200 Sobic001G155000 Sobic001G155000 Sobic008G153000--Sobic001G155000 Sobic003G445400 Sobic003G445400 Sobic008G153000--Sobic003G445400 Sobic003G059750 Sobic003G059750 Sobic008G153000--Sobic003G059750 Sobic007G026000 Sobic007G026000 Sobic008G153000--Sobic007G026000 Sobic010G069100 Sobic010G069100 Sobic008G153000--Sobic010G069100 Sobic006G046700--Sobic008G153000 Sobic004G031700 Sobic004G031700 Sobic006G046700--Sobic004G031700 Sobic006G046700--Sobic007G026000 Sobic001G206100 Sobic001G206100 Sobic006G046700--Sobic001G206100 Sobic001G306900 Sobic001G306900 Sobic006G046700--Sobic001G306900 Sobic006G046700--Sobic003G445400 Sobic001G425000 Sobic001G425000 Sobic006G046700--Sobic001G425000 Sobic001G405300 Sobic001G405300 Sobic006G046700--Sobic001G405300 Sobic006G013500 Sobic006G013500 Sobic006G046700--Sobic006G013500 Sobic001G252700--Sobic006G211500 Sobic001G252700--Sobic010G189000 Sobic004G213000 Sobic004G213000 Sobic001G252700--Sobic004G213000 Sobic001G252700--Sobic006G046700 Sobic003G036900 Sobic003G036900 Sobic001G252700--Sobic003G036900 Sobic001G257300 Sobic001G257300 Sobic001G252700--Sobic001G257300 Sobic001G252700--Sobic007G095200 Sobic001G252700--Sobic001G206100 Sobic001G252700--Sobic006G028200 Sobic008G173100 Sobic008G173100 Sobic002G260400--Sobic008G173100 Sobic002G056701 Sobic002G056701 Sobic002G260400--Sobic002G056701 Sobic002G063900 Sobic002G063900 Sobic002G260400--Sobic002G063900 Sobic002G370900 Sobic002G370900 Sobic002G260400--Sobic002G370900 Sobic002G260400--Sobic006G116100 Sobic002G260400--Sobic008G153000 Sobic010G236400 Sobic010G236400 Sobic002G260400--Sobic010G236400 Sobic002G083500 Sobic002G083500 Sobic002G260400--Sobic002G083500 Sobic010G245000 Sobic010G245000 Sobic002G260400--Sobic010G245000 Sobic005G133500 Sobic005G133500 Sobic001G080900--Sobic005G133500 Sobic001G504200 Sobic001G504200 Sobic001G080900--Sobic001G504200 Sobic010G201500 Sobic010G201500 Sobic001G080900--Sobic010G201500 Sobic001G080900--Sobic008G153000 Sobic008G084700 Sobic008G084700 Sobic001G080900--Sobic008G084700 Sobic002G423200 Sobic002G423200 Sobic001G080900--Sobic002G423200 Sobic001G080900--Sobic007G026000 Sobic004G138000 Sobic004G138000 Sobic001G080900--Sobic004G138000 Sobic009G151200 Sobic009G151200 Sobic001G080900--Sobic009G151200 Sobic004G246100--Sobic008G149800 Sobic004G246100--Sobic008G153000 Sobic007G061700 Sobic007G061700 Sobic004G246100--Sobic007G061700 Sobic004G246100--Sobic002G063900 Sobic004G246100--Sobic008G173100 Sobic004G246100--Sobic006G116100 Sobic004G246100--Sobic006G046700 Sobic009G137100 Sobic009G137100 Sobic004G246100--Sobic009G137100 Sobic004G246100--Sobic002G260400 Sobic005G118600--Sobic003G059750 Sobic005G118600--Sobic008G084700 Sobic003G225700 Sobic003G225700 Sobic005G118600--Sobic003G225700 Sobic001G065000 Sobic001G065000 Sobic005G118600--Sobic001G065000 Sobic009G166300 Sobic009G166300 Sobic005G118600--Sobic009G166300 Sobic005G118600--Sobic008G153000 Sobic001G114000 Sobic001G114000 Sobic005G118600--Sobic001G114000 Sobic002G071500 Sobic002G071500 Sobic005G118600--Sobic002G071500 Sobic007G103600 Sobic007G103600 Sobic005G118600--Sobic007G103600
Octagon: transcription factors


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