Gene annotation
Transcriptome id Sobic.006G058600.2,Sobic.006G058600.1
Synonym AML1, Sb06g014670, ML1
Functional annotation AML1, putative, expressed
UniProt A0A1B6PKG4 , A0A1Z5RCH6
Pfam PF00076 PF04059
Panther DB PTHR24012 PTHR24012:SF390
NCBI CDD KOG4660; Protein Mei2, essential for commitment to meiosis, and related proteins
KEGG Orthology -
Gene Ontology GO:0003676; nucleic acid binding


Orthologs (automatic annotation)
TAIR AT5G61960 : MEI2-like protein 1
RAP-DB (Rice) LOC_Os02g31290.1 : AML1, putative, expressed
MaizeGDB (Corn) Zm00025a055943 , Zm00025a031336 , Zm00025a020452 , Zm00025a020050
Brachypodium KQJ99630 , PNT60935 , KQJ82362 , KQJ82314 , KQJ82315 , KQJ82316 , KQJ82317 , KQJ82318 , PNT60936 , PNT60937
Barley HORVU2Hr1G071240.8 , HORVU2Hr1G071240.9 , HORVU2Hr1G071240.2 , HORVU2Hr1G071240.3 , HORVU2Hr1G071240.1 , HORVU2Hr1G071240.6 , HORVU2Hr1G071240.7 , HORVU2Hr1G071240.4 , HORVU2Hr1G071240.5 , HORVU2Hr1G071240.10 , HORVU2Hr1G071240.11 , HORVU2Hr1G071240.12 , HORVU2Hr1G071240.13 , HORVU2Hr1G071240.14
Wheat TraesCS2D02G286200 , TraesCS2D02G286200 , TraesCS2D02G286200 , TraesCS2D02G286200 , TraesCS2D02G286200 , TraesCS2D02G286200 , TraesCS2A02G287900 , TraesCS2A02G287900 , TraesCS2A02G287900 , TraesCS2A02G287900 , TraesCS2A02G287900 , TraesCS2A02G287900 , TraesCS2A02G287900 , TraesCS2A02G287900 , TraesCS2A02G287900 , TraesCS2B02G304600 , TraesCS2B02G304600 , TraesCS2B02G304600 , TraesCS2B02G304600 , TraesCS2B02G304600 , TraesCS2B02G304600 , TraesCS2D02G286200 , TraesCS2D02G286200 , TraesCS2A02G287900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G229800 Uncharacterized gene family(PubMedID : 29126242)@"Causal gene for dw1, a putative membrane protein of unknown function"(PubMedID : 26963094)@expressed protein -
2 Sobic.004G330900 Positive cytokinine regulator(PubMedID : 30367619)@two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
3 Sobic.003G401200 selenium-binding protein, putative, expressed K17285: methanethiol oxidase
4 Sobic.001G447500 aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
5 Sobic.003G329400 dihydropyrimidinase, putative, expressed K01464: DPYS, dht, dihydropyrimidinase
6 Sobic.001G443900 peptide transporter PTR2, putative, expressed -
7 Sobic.002G215700 similar to Aldehyde dehydrogenase(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Aldehyde dehydrogenase B4(PubMedID : 26320239)@Zinc finger(C3H4-type Ring finger) family protein(PubMedID : 26320239)@a glutamate S-semialdehyde dehydrogenase(PubMedID : 26320239)@aldehyde dehydrogenase, putative, expressed K14085: aldehyde dehydrogenase family 7 member A1
8 Sobic.001G427100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K13354: SLC25A17, solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17
9 Sobic.003G148800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K09699: DBT, 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase)
10 Sobic.004G060900 STRUBBELIG-RECEPTOR FAMILY 3 precursor, putative, expressed -
11 Sobic.001G227800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
12 Sobic.003G219600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ThiF family domain containing protein, putative, expressed K08337: ubiquitin-like modifier-activating enzyme ATG7
13 Sobic.001G156100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@aminotransferase, putative, expressed K00819: rocD, ornithine--oxo-acid transaminase
14 Sobic.007G068100 aconitate hydratase protein, putative, expressed K01681: ACO, aconitate hydratase
15 Sobic.008G017800 alpha-N-arabinofuranosidase A, putative, expressed K01209: alpha-L-arabinofuranosidase
16 Sobic.009G211400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
17 Sobic.010G248800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@reticulon domain containing protein, putative, expressed -
18 Sobic.009G121100 expressed protein -
19 Sobic.007G041400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF1336 domain containing protein, expressed -
20 Sobic.007G202600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pumilio domain-containing protein PPD1, putative, expressed K17943: pumilio RNA-binding family


Gene co-expression network
sample Sobic006G058600 Sobic006G058600 Sobic009G229800 Sobic009G229800 Sobic006G058600--Sobic009G229800 Sobic004G330900 Sobic004G330900 Sobic006G058600--Sobic004G330900 Sobic003G401200 Sobic003G401200 Sobic006G058600--Sobic003G401200 Sobic001G447500 Sobic001G447500 Sobic006G058600--Sobic001G447500 Sobic003G329400 Sobic003G329400 Sobic006G058600--Sobic003G329400 Sobic001G443900 Sobic001G443900 Sobic006G058600--Sobic001G443900 Sobic002G215700 Sobic002G215700 Sobic006G058600--Sobic002G215700 Sobic001G427100 Sobic001G427100 Sobic006G058600--Sobic001G427100 Sobic003G148800 Sobic003G148800 Sobic006G058600--Sobic003G148800 Sobic003G407300 Sobic003G407300 Sobic009G229800--Sobic003G407300 Sobic001G156100 Sobic001G156100 Sobic009G229800--Sobic001G156100 Sobic004G060900 Sobic004G060900 Sobic009G229800--Sobic004G060900 Sobic001G373200 Sobic001G373200 Sobic009G229800--Sobic001G373200 Sobic009G121100 Sobic009G121100 Sobic009G229800--Sobic009G121100 Sobic009G229800--Sobic001G443900 Sobic002G419800 Sobic002G419800 Sobic009G229800--Sobic002G419800 Sobic009G057300 Sobic009G057300 Sobic009G229800--Sobic009G057300 Sobic007G172400 Sobic007G172400 Sobic009G229800--Sobic007G172400 Sobic003G145900 Sobic003G145900 Sobic004G330900--Sobic003G145900 Sobic004G330900--Sobic009G121100 Sobic004G282400 Sobic004G282400 Sobic004G330900--Sobic004G282400 Sobic001G221100 Sobic001G221100 Sobic004G330900--Sobic001G221100 Sobic007G202600 Sobic007G202600 Sobic004G330900--Sobic007G202600 Sobic002G303000 Sobic002G303000 Sobic004G330900--Sobic002G303000 Sobic004G330900--Sobic009G229800 Sobic004G330900--Sobic006G058600 Sobic004G330900--Sobic001G443900 Sobic003G366400 Sobic003G366400 Sobic003G401200--Sobic003G366400 Sobic004G169700 Sobic004G169700 Sobic003G401200--Sobic004G169700 Sobic009G152700 Sobic009G152700 Sobic003G401200--Sobic009G152700 Sobic008G062200 Sobic008G062200 Sobic003G401200--Sobic008G062200 Sobic003G219600 Sobic003G219600 Sobic003G401200--Sobic003G219600 Sobic001G227800 Sobic001G227800 Sobic003G401200--Sobic001G227800 Sobic009G211400 Sobic009G211400 Sobic003G401200--Sobic009G211400 Sobic003G401200--Sobic003G329400 Sobic003G401200--Sobic002G215700 Sobic001G447500--Sobic001G156100 Sobic006G214500 Sobic006G214500 Sobic001G447500--Sobic006G214500 Sobic001G447500--Sobic003G329400 Sobic001G447500--Sobic003G148800 Sobic001G447500--Sobic008G062200 Sobic007G219900 Sobic007G219900 Sobic001G447500--Sobic007G219900 Sobic001G447500--Sobic003G407300 Sobic001G447500--Sobic009G121100 Sobic001G447500--Sobic001G443900 Sobic001G322700 Sobic001G322700 Sobic003G329400--Sobic001G322700 Sobic003G329400--Sobic008G062200 Sobic001G325200 Sobic001G325200 Sobic003G329400--Sobic001G325200 Sobic010G107000 Sobic010G107000 Sobic003G329400--Sobic010G107000 Sobic002G304000 Sobic002G304000 Sobic003G329400--Sobic002G304000 Sobic007G068100 Sobic007G068100 Sobic003G329400--Sobic007G068100 Sobic009G226300 Sobic009G226300 Sobic003G329400--Sobic009G226300 Sobic003G329400--Sobic003G148800 Sobic003G354400 Sobic003G354400 Sobic003G329400--Sobic003G354400 Sobic001G443900--Sobic006G214500 Sobic001G443900--Sobic009G121100 Sobic003G005800 Sobic003G005800 Sobic001G443900--Sobic003G005800 Sobic001G443900--Sobic001G373200 Sobic001G443900--Sobic003G407300 Sobic006G138400 Sobic006G138400 Sobic001G443900--Sobic006G138400 Sobic001G443900--Sobic001G447500 Sobic001G443900--Sobic001G156100 Sobic001G443900--Sobic009G229800 Sobic002G215700--Sobic001G227800 Sobic009G054500 Sobic009G054500 Sobic002G215700--Sobic009G054500 Sobic002G215700--Sobic009G226300 Sobic004G101900 Sobic004G101900 Sobic002G215700--Sobic004G101900 Sobic002G215700--Sobic002G304000 Sobic006G100332 Sobic006G100332 Sobic002G215700--Sobic006G100332 Sobic003G138200 Sobic003G138200 Sobic002G215700--Sobic003G138200 Sobic002G215700--Sobic003G148800 Sobic005G018500 Sobic005G018500 Sobic002G215700--Sobic005G018500 Sobic003G305200 Sobic003G305200 Sobic001G427100--Sobic003G305200 Sobic001G427100--Sobic009G121100 Sobic001G474700 Sobic001G474700 Sobic001G427100--Sobic001G474700 Sobic004G295800 Sobic004G295800 Sobic001G427100--Sobic004G295800 Sobic001G427100--Sobic001G156100 Sobic009G126900 Sobic009G126900 Sobic001G427100--Sobic009G126900 Sobic003G005600 Sobic003G005600 Sobic001G427100--Sobic003G005600 Sobic001G427100--Sobic003G329400 Sobic001G427100--Sobic001G373200 Sobic003G148800--Sobic009G226300 Sobic003G148800--Sobic009G054500 Sobic003G148800--Sobic001G325200 Sobic004G321800 Sobic004G321800 Sobic003G148800--Sobic004G321800 Sobic003G148800--Sobic002G304000 Sobic003G148800--Sobic005G018500 Sobic001G150600 Sobic001G150600 Sobic003G148800--Sobic001G150600 Sobic003G148800--Sobic006G100332 Sobic006G030700 Sobic006G030700 Sobic003G148800--Sobic006G030700
Octagon: transcription factors


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