Gene annotation
Transcriptome id Sobic.005G225400.2
Synonym Sb05g027410
Functional annotation expressed protein
UniProt A0A1Z5RK20
Pfam PF07762
Panther DB PTHR33074 PTHR33074:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g39710.1 : expressed protein
MaizeGDB (Corn) Zm00025a039129
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G225400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G211500 "GA biosynthetic gene, causes dwarfism accompanied by unusual culm bending in the mutants"(PubMedID : 24924234)@ent-kaurene synthase, chloroplast precursor, putative, expressed K04121: ent-kaurene synthase
2 Sobic.004G330900 Positive cytokinine regulator(PubMedID : 30367619)@two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
3 Sobic.009G229800 Uncharacterized gene family(PubMedID : 29126242)@"Causal gene for dw1, a putative membrane protein of unknown function"(PubMedID : 26963094)@expressed protein -
4 Sobic.005G163100 dnaJ domain containing protein, expressed -
5 Sobic.007G041500 diacylglycerol kinase, putative, expressed -
6 Sobic.004G282400 rhoGAP domain containing protein, expressed -
7 Sobic.007G202600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pumilio domain-containing protein PPD1, putative, expressed K17943: pumilio RNA-binding family
8 Sobic.002G058400 disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
9 Sobic.006G058600 AML1, putative, expressed -
10 Sobic.007G208600 leucine rich repeat containing protein, expressed -
11 Sobic.006G213300 methyl-CpG binding domain containing protein, putative, expressed -
12 Sobic.006G114500 per1-like family protein, putative, expressed -
13 Sobic.009G137100 bZIP transcription factor domain containing protein, expressed -
14 Sobic.001G443900 peptide transporter PTR2, putative, expressed -
15 Sobic.003G145900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyltransferase, putative, expressed K13510: lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase
16 Sobic.004G246100 nicalin, putative, expressed K06171: nicastrin
17 Sobic.010G189000 protein with a conserved N-terminal region, putative, expressed -
18 Sobic.003G259100 GPI transamidase component family protein, putative, expressed K05289: GPI-anchor transamidase subunit GAA1
19 Sobic.006G083400 OsPDIL5-2 protein disulfide isomerase PDIL5-2, expressed K09580: PDIA1, protein disulfide-isomerase A1
20 Sobic.009G135800 CUE domain containing protein, expressed -


Gene co-expression network
sample Sobic005G225400 Sobic005G225400 Sobic006G211500 Sobic006G211500 Sobic005G225400--Sobic006G211500 Sobic004G330900 Sobic004G330900 Sobic005G225400--Sobic004G330900 Sobic009G229800 Sobic009G229800 Sobic005G225400--Sobic009G229800 Sobic005G163100 Sobic005G163100 Sobic005G225400--Sobic005G163100 Sobic007G041500 Sobic007G041500 Sobic005G225400--Sobic007G041500 Sobic004G282400 Sobic004G282400 Sobic005G225400--Sobic004G282400 Sobic007G202600 Sobic007G202600 Sobic005G225400--Sobic007G202600 Sobic002G058400 Sobic002G058400 Sobic005G225400--Sobic002G058400 Sobic006G058600 Sobic006G058600 Sobic005G225400--Sobic006G058600 Sobic010G189000 Sobic010G189000 Sobic006G211500--Sobic010G189000 Sobic007G208600 Sobic007G208600 Sobic006G211500--Sobic007G208600 Sobic006G046700 Sobic006G046700 Sobic006G211500--Sobic006G046700 Sobic001G252700 Sobic001G252700 Sobic006G211500--Sobic001G252700 Sobic006G211500--Sobic005G225400 Sobic002G288000 Sobic002G288000 Sobic006G211500--Sobic002G288000 Sobic004G246100 Sobic004G246100 Sobic006G211500--Sobic004G246100 Sobic008G153000 Sobic008G153000 Sobic006G211500--Sobic008G153000 Sobic007G095200 Sobic007G095200 Sobic006G211500--Sobic007G095200 Sobic003G145900 Sobic003G145900 Sobic004G330900--Sobic003G145900 Sobic009G121100 Sobic009G121100 Sobic004G330900--Sobic009G121100 Sobic004G330900--Sobic004G282400 Sobic001G221100 Sobic001G221100 Sobic004G330900--Sobic001G221100 Sobic004G330900--Sobic007G202600 Sobic002G303000 Sobic002G303000 Sobic004G330900--Sobic002G303000 Sobic004G330900--Sobic009G229800 Sobic004G330900--Sobic006G058600 Sobic001G443900 Sobic001G443900 Sobic004G330900--Sobic001G443900 Sobic003G407300 Sobic003G407300 Sobic009G229800--Sobic003G407300 Sobic001G156100 Sobic001G156100 Sobic009G229800--Sobic001G156100 Sobic004G060900 Sobic004G060900 Sobic009G229800--Sobic004G060900 Sobic001G373200 Sobic001G373200 Sobic009G229800--Sobic001G373200 Sobic009G229800--Sobic009G121100 Sobic009G229800--Sobic001G443900 Sobic002G419800 Sobic002G419800 Sobic009G229800--Sobic002G419800 Sobic009G057300 Sobic009G057300 Sobic009G229800--Sobic009G057300 Sobic007G172400 Sobic007G172400 Sobic009G229800--Sobic007G172400 Sobic006G210000 Sobic006G210000 Sobic005G163100--Sobic006G210000 Sobic001G134300 Sobic001G134300 Sobic005G163100--Sobic001G134300 Sobic010G001100 Sobic010G001100 Sobic005G163100--Sobic010G001100 Sobic003G133900 Sobic003G133900 Sobic005G163100--Sobic003G133900 Sobic004G155600 Sobic004G155600 Sobic005G163100--Sobic004G155600 Sobic005G163100--Sobic004G246100 Sobic001G090800 Sobic001G090800 Sobic005G163100--Sobic001G090800 Sobic004G355800 Sobic004G355800 Sobic005G163100--Sobic004G355800 Sobic001G014300 Sobic001G014300 Sobic005G163100--Sobic001G014300 Sobic007G119200 Sobic007G119200 Sobic007G041500--Sobic007G119200 Sobic009G148300 Sobic009G148300 Sobic007G041500--Sobic009G148300 Sobic010G034000 Sobic010G034000 Sobic007G041500--Sobic010G034000 Sobic007G041500--Sobic008G153000 Sobic001G091400 Sobic001G091400 Sobic007G041500--Sobic001G091400 Sobic007G041500--Sobic004G246100 Sobic004G072100 Sobic004G072100 Sobic007G041500--Sobic004G072100 Sobic010G116600 Sobic010G116600 Sobic007G041500--Sobic010G116600 Sobic002G071500 Sobic002G071500 Sobic007G041500--Sobic002G071500 Sobic004G282400--Sobic010G189000 Sobic004G350100 Sobic004G350100 Sobic004G282400--Sobic004G350100 Sobic004G282400--Sobic004G330900 Sobic009G056800 Sobic009G056800 Sobic004G282400--Sobic009G056800 Sobic004G205600 Sobic004G205600 Sobic004G282400--Sobic004G205600 Sobic006G173100 Sobic006G173100 Sobic004G282400--Sobic006G173100 Sobic006G114500 Sobic006G114500 Sobic004G282400--Sobic006G114500 Sobic004G282400--Sobic007G202600 Sobic002G423200 Sobic002G423200 Sobic004G282400--Sobic002G423200 Sobic010G083000 Sobic010G083000 Sobic007G202600--Sobic010G083000 Sobic007G202600--Sobic007G041500 Sobic002G189400 Sobic002G189400 Sobic007G202600--Sobic002G189400 Sobic007G202600--Sobic004G330900 Sobic007G202600--Sobic004G282400 Sobic010G188400 Sobic010G188400 Sobic007G202600--Sobic010G188400 Sobic002G152200 Sobic002G152200 Sobic007G202600--Sobic002G152200 Sobic009G193300 Sobic009G193300 Sobic007G202600--Sobic009G193300 Sobic007G202600--Sobic006G114500 Sobic003G267800 Sobic003G267800 Sobic002G058400--Sobic003G267800 Sobic001G504200 Sobic001G504200 Sobic002G058400--Sobic001G504200 Sobic005G133500 Sobic005G133500 Sobic002G058400--Sobic005G133500 Sobic009G135800 Sobic009G135800 Sobic002G058400--Sobic009G135800 Sobic004G223600 Sobic004G223600 Sobic002G058400--Sobic004G223600 Sobic002G058400--Sobic004G246100 Sobic006G245400 Sobic006G245400 Sobic002G058400--Sobic006G245400 Sobic002G396000 Sobic002G396000 Sobic002G058400--Sobic002G396000 Sobic001G509500 Sobic001G509500 Sobic002G058400--Sobic001G509500 Sobic006G058600--Sobic009G229800 Sobic006G058600--Sobic004G330900 Sobic003G401200 Sobic003G401200 Sobic006G058600--Sobic003G401200 Sobic001G447500 Sobic001G447500 Sobic006G058600--Sobic001G447500 Sobic003G329400 Sobic003G329400 Sobic006G058600--Sobic003G329400 Sobic006G058600--Sobic001G443900 Sobic002G215700 Sobic002G215700 Sobic006G058600--Sobic002G215700 Sobic001G427100 Sobic001G427100 Sobic006G058600--Sobic001G427100 Sobic003G148800 Sobic003G148800 Sobic006G058600--Sobic003G148800
Octagon: transcription factors


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