Gene annotation
Transcriptome id Sobic.001G252700.2
Synonym CSLA09, RAT4, ATCSLA9, CSLA9, Sb01g022320, ATCSLA09
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
CSLA2 - cellulose synthase-like family A
mannan synthase, expressed
UniProt A0A1Z5S7M1
Pfam PF13632
Panther DB PTHR32044 PTHR32044:SF22
NCBI CDD -
KEGG Orthology K13680; beta-mannan synthase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G03760 : Nucleotide-diphospho-sugar transferases superfamily protein
RAP-DB (Rice) LOC_Os03g07350.1 : CSLA4 - cellulose synthase-like family A; mannan synthase, expressed
MaizeGDB (Corn) Zm00025a053341 , Zm00025a006992 , Zm00025a022027
Brachypodium KQJ98402 , KQJ96611
Barley HORVU7Hr1G038440.8 , HORVU7Hr1G038440.9 , HORVU7Hr1G038440.2 , HORVU7Hr1G038440.3 , HORVU7Hr1G038440.1 , HORVU7Hr1G038440.7 , HORVU7Hr1G038440.4 , HORVU7Hr1G038440.5 , HORVU7Hr1G038440.10 , HORVU7Hr1G038440.11 , HORVU7Hr1G038440.12 , HORVU7Hr1G038440.13 , HORVU7Hr1G038440.14 , HORVU7Hr1G038440.15 , HORVU6Hr1G018840.5 , HORVU6Hr1G018840.4 , HORVU6Hr1G018840.7 , HORVU6Hr1G018840.6 , HORVU6Hr1G018840.1 , HORVU6Hr1G018840.3 , HORVU6Hr1G018840.9 , HORVU6Hr1G018840.8 , HORVU6Hr1G018840.2 , HORVU6Hr1G018840.11 , HORVU6Hr1G018840.13 , HORVU6Hr1G018840.12 , HORVU6Hr1G018840.15 , HORVU6Hr1G018840.14 , HORVU6Hr1G018840.17 , HORVU6Hr1G018840.16 , HORVU6Hr1G018840.18
Wheat TraesCS6D02G094300 , TraesCS7D02G190000 , TraesCS6B02G135100 , TraesCS6A02G105800 , TraesCS7B02G093900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G211500 "GA biosynthetic gene, causes dwarfism accompanied by unusual culm bending in the mutants"(PubMedID : 24924234)@ent-kaurene synthase, chloroplast precursor, putative, expressed K04121: ent-kaurene synthase
2 Sobic.010G189000 protein with a conserved N-terminal region, putative, expressed -
3 Sobic.004G213000 AT hook motif family protein, expressed -
4 Sobic.006G046700 vacuolar protein sorting-associated protein 11, putative, expressed -
5 Sobic.003G036900 glycine-rich protein, putative, expressed -
6 Sobic.001G257300 OsFBL52 - F-box domain and LRR containing protein, expressed -
7 Sobic.007G095200 ATPase, AFG1 family domain containing protein, expressed K18798: AFG1, peroxisome-assembly ATPase
8 Sobic.001G206100 expressed protein -
9 Sobic.006G028200 glycine-rich protein, putative, expressed -
10 Sobic.004G271000 expressed protein -
11 Sobic.002G288000 bromodomain domain containing protein, expressed K11723: bromodomain-containing protein 7
12 Sobic.007G208600 leucine rich repeat containing protein, expressed -
13 Sobic.006G080300 SET domain containing protein, expressed -
14 Sobic.006G013500 hydrolase/ zinc ion binding protein, putative, expressed K15442: TAD3, tRNA-specific adenosine deaminase 3
15 Sobic.005G198100 FRA10AC1, putative, expressed K13121: protein FRA10AC1
16 Sobic.007G026000 ATBET9, putative, expressed -
17 Sobic.003G041000 holocarboxylase synthetase, putative, expressed -
18 Sobic.001G517500 Ubiquitin family domain containing protein, expressed K04523: UBQLN, ubiquilin
19 Sobic.005G059100 bromodomain domain containing protein, expressed -
20 Sobic.002G001600 MBTB12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein


Gene co-expression network
sample Sobic001G252700 Sobic001G252700 Sobic006G211500 Sobic006G211500 Sobic001G252700--Sobic006G211500 Sobic010G189000 Sobic010G189000 Sobic001G252700--Sobic010G189000 Sobic004G213000 Sobic004G213000 Sobic001G252700--Sobic004G213000 Sobic006G046700 Sobic006G046700 Sobic001G252700--Sobic006G046700 Sobic003G036900 Sobic003G036900 Sobic001G252700--Sobic003G036900 Sobic001G257300 Sobic001G257300 Sobic001G252700--Sobic001G257300 Sobic007G095200 Sobic007G095200 Sobic001G252700--Sobic007G095200 Sobic001G206100 Sobic001G206100 Sobic001G252700--Sobic001G206100 Sobic006G028200 Sobic006G028200 Sobic001G252700--Sobic006G028200 Sobic006G211500--Sobic010G189000 Sobic007G208600 Sobic007G208600 Sobic006G211500--Sobic007G208600 Sobic006G211500--Sobic006G046700 Sobic006G211500--Sobic001G252700 Sobic005G225400 Sobic005G225400 Sobic006G211500--Sobic005G225400 Sobic002G288000 Sobic002G288000 Sobic006G211500--Sobic002G288000 Sobic004G246100 Sobic004G246100 Sobic006G211500--Sobic004G246100 Sobic008G153000 Sobic008G153000 Sobic006G211500--Sobic008G153000 Sobic006G211500--Sobic007G095200 Sobic010G189000--Sobic006G028200 Sobic007G079200 Sobic007G079200 Sobic010G189000--Sobic007G079200 Sobic001G094000 Sobic001G094000 Sobic010G189000--Sobic001G094000 Sobic009G040700 Sobic009G040700 Sobic010G189000--Sobic009G040700 Sobic006G183800 Sobic006G183800 Sobic010G189000--Sobic006G183800 Sobic010G189000--Sobic002G288000 Sobic004G282400 Sobic004G282400 Sobic010G189000--Sobic004G282400 Sobic010G189000--Sobic006G046700 Sobic004G061900 Sobic004G061900 Sobic010G189000--Sobic004G061900 Sobic004G271000 Sobic004G271000 Sobic004G213000--Sobic004G271000 Sobic004G213000--Sobic001G206100 Sobic006G032400 Sobic006G032400 Sobic004G213000--Sobic006G032400 Sobic006G080300 Sobic006G080300 Sobic004G213000--Sobic006G080300 Sobic002G248400 Sobic002G248400 Sobic004G213000--Sobic002G248400 Sobic003G108700 Sobic003G108700 Sobic004G213000--Sobic003G108700 Sobic002G157000 Sobic002G157000 Sobic004G213000--Sobic002G157000 Sobic002G151600 Sobic002G151600 Sobic004G213000--Sobic002G151600 Sobic004G213000--Sobic001G257300 Sobic006G046700--Sobic008G153000 Sobic004G031700 Sobic004G031700 Sobic006G046700--Sobic004G031700 Sobic007G026000 Sobic007G026000 Sobic006G046700--Sobic007G026000 Sobic006G046700--Sobic001G206100 Sobic001G306900 Sobic001G306900 Sobic006G046700--Sobic001G306900 Sobic003G445400 Sobic003G445400 Sobic006G046700--Sobic003G445400 Sobic001G425000 Sobic001G425000 Sobic006G046700--Sobic001G425000 Sobic001G405300 Sobic001G405300 Sobic006G046700--Sobic001G405300 Sobic006G013500 Sobic006G013500 Sobic006G046700--Sobic006G013500 Sobic001G155000 Sobic001G155000 Sobic003G036900--Sobic001G155000 Sobic010G201500 Sobic010G201500 Sobic003G036900--Sobic010G201500 Sobic010G275500 Sobic010G275500 Sobic003G036900--Sobic010G275500 Sobic003G036900--Sobic006G028200 Sobic004G146500 Sobic004G146500 Sobic003G036900--Sobic004G146500 Sobic010G116600 Sobic010G116600 Sobic003G036900--Sobic010G116600 Sobic010G053800 Sobic010G053800 Sobic003G036900--Sobic010G053800 Sobic004G138000 Sobic004G138000 Sobic003G036900--Sobic004G138000 Sobic006G035300 Sobic006G035300 Sobic003G036900--Sobic006G035300 Sobic001G257300--Sobic001G206100 Sobic001G257300--Sobic006G013500 Sobic003G170100 Sobic003G170100 Sobic001G257300--Sobic003G170100 Sobic001G257300--Sobic006G080300 Sobic003G200200 Sobic003G200200 Sobic001G257300--Sobic003G200200 Sobic002G001600 Sobic002G001600 Sobic001G257300--Sobic002G001600 Sobic001G257300--Sobic004G213000 Sobic002G161000 Sobic002G161000 Sobic001G257300--Sobic002G161000 Sobic001G162300 Sobic001G162300 Sobic001G257300--Sobic001G162300 Sobic007G095200--Sobic006G046700 Sobic003G336800 Sobic003G336800 Sobic007G095200--Sobic003G336800 Sobic007G185900 Sobic007G185900 Sobic007G095200--Sobic007G185900 Sobic007G095200--Sobic001G405300 Sobic007G095200--Sobic006G028200 Sobic005G059100 Sobic005G059100 Sobic007G095200--Sobic005G059100 Sobic001G296500 Sobic001G296500 Sobic007G095200--Sobic001G296500 Sobic004G012000 Sobic004G012000 Sobic007G095200--Sobic004G012000 Sobic007G095200--Sobic007G026000 Sobic001G206100--Sobic001G257300 Sobic001G206100--Sobic006G013500 Sobic002G320500 Sobic002G320500 Sobic001G206100--Sobic002G320500 Sobic001G206100--Sobic006G080300 Sobic001G206100--Sobic002G157000 Sobic009G000500 Sobic009G000500 Sobic001G206100--Sobic009G000500 Sobic001G206100--Sobic004G213000 Sobic001G356500 Sobic001G356500 Sobic001G206100--Sobic001G356500 Sobic001G206100--Sobic002G161000 Sobic003G401000 Sobic003G401000 Sobic006G028200--Sobic003G401000 Sobic006G028200--Sobic001G094000 Sobic006G028200--Sobic009G040700 Sobic006G028200--Sobic010G189000 Sobic003G187400 Sobic003G187400 Sobic006G028200--Sobic003G187400 Sobic006G028200--Sobic006G046700 Sobic006G028200--Sobic001G296500 Sobic006G028200--Sobic003G036900 Sobic001G477800 Sobic001G477800 Sobic006G028200--Sobic001G477800
Octagon: transcription factors


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