Gene annotation
Transcriptome id Sobic.005G198100.1
Synonym Sb05g025520
Functional annotation FRA10AC1, putative, expressed
UniProt C5Y701
Pfam PF09725
Panther DB PTHR11567
NCBI CDD KOG1297; Uncharacterized conserved protein
KEGG Orthology K13121; protein FRA10AC1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G15030 : -
RAP-DB (Rice) LOC_Os11g42000.1 : FRA10AC1, putative, expressed
MaizeGDB (Corn) Zm00025a015903
Brachypodium KQJ87577 , KQJ87576 , KQJ87575
Barley HORVU3Hr1G017190.3 , HORVU3Hr1G017190.2 , HORVU3Hr1G017190.1 , HORVU3Hr1G017220.1
Wheat TraesCS5D02G279200 , TraesCS7A02G024500 , TraesCS7A02G024500 , TraesCS7A02G024500 , TraesCS7D02G022500 , TraesCS7D02G022500 , TraesCS7B02G096900 , TraesCS7B02G096900 , TraesCS7B02G096900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G248400 ENT domain containing protein, expressed -
2 Sobic.003G173950 - -
3 Sobic.001G347300 splicing factor, arginine/serine-rich 16, putative, expressed K13168: splicing factor, arginine/serine-rich 16
4 Sobic.003G200200 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
5 Sobic.006G013500 hydrolase/ zinc ion binding protein, putative, expressed K15442: TAD3, tRNA-specific adenosine deaminase 3
6 Sobic.001G155000 DNA-directed RNA polymerase II subunit RPB2, putative, expressed K03010: RPB2, DNA-directed RNA polymerase II subunit RPB2
7 Sobic.003G241200 nucampholin, putative, expressed K13100: pre-mRNA-splicing factor CWC22
8 Sobic.003G170100 - -
9 Sobic.003G268300 surp module family protein, putative, expressed -
10 Sobic.002G157000 enhancer of polycomb, putative, expressed K11322: enhancer of polycomb-like protein
11 Sobic.004G213000 AT hook motif family protein, expressed -
12 Sobic.001G094000 expressed protein -
13 Sobic.002G186000 CD2-binding protein-related, putative, expressed K13099: CD2BP2, CD2 antigen cytoplasmic tail-binding protein 2
14 Sobic.003G108700 RNA recognition motif, putative, expressed -
15 Sobic.003G187400 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
16 Sobic.003G406800 OsMADS65 - MADS-box family gene with MIKC , type-box, expressed -
17 Sobic.001G251700 OsPP2Ac-4 - Phosphatase 2A isoform 4 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
18 Sobic.005G110472 - -
19 Sobic.006G080300 SET domain containing protein, expressed -
20 Sobic.003G422300 recA protein, expressed K03553: recombination protein RecA


Gene co-expression network
sample Sobic005G198100 Sobic005G198100 Sobic002G248400 Sobic002G248400 Sobic005G198100--Sobic002G248400 Sobic003G173950 Sobic003G173950 Sobic005G198100--Sobic003G173950 Sobic001G347300 Sobic001G347300 Sobic005G198100--Sobic001G347300 Sobic003G200200 Sobic003G200200 Sobic005G198100--Sobic003G200200 Sobic006G013500 Sobic006G013500 Sobic005G198100--Sobic006G013500 Sobic001G155000 Sobic001G155000 Sobic005G198100--Sobic001G155000 Sobic003G241200 Sobic003G241200 Sobic005G198100--Sobic003G241200 Sobic003G170100 Sobic003G170100 Sobic005G198100--Sobic003G170100 Sobic003G268300 Sobic003G268300 Sobic005G198100--Sobic003G268300 Sobic002G157000 Sobic002G157000 Sobic002G248400--Sobic002G157000 Sobic003G108700 Sobic003G108700 Sobic002G248400--Sobic003G108700 Sobic002G248400--Sobic003G268300 Sobic001G420200 Sobic001G420200 Sobic002G248400--Sobic001G420200 Sobic002G320500 Sobic002G320500 Sobic002G248400--Sobic002G320500 Sobic002G248400--Sobic003G200200 Sobic006G032400 Sobic006G032400 Sobic002G248400--Sobic006G032400 Sobic001G090400 Sobic001G090400 Sobic002G248400--Sobic001G090400 Sobic004G257400 Sobic004G257400 Sobic002G248400--Sobic004G257400 Sobic001G356500 Sobic001G356500 Sobic003G173950--Sobic001G356500 Sobic003G173950--Sobic003G241200 Sobic003G197800 Sobic003G197800 Sobic003G173950--Sobic003G197800 Sobic003G173950--Sobic002G320500 Sobic003G173950--Sobic002G157000 Sobic007G065400 Sobic007G065400 Sobic003G173950--Sobic007G065400 Sobic004G084300 Sobic004G084300 Sobic003G173950--Sobic004G084300 Sobic009G102500 Sobic009G102500 Sobic003G173950--Sobic009G102500 Sobic001G206100 Sobic001G206100 Sobic003G173950--Sobic001G206100 Sobic007G126600 Sobic007G126600 Sobic001G347300--Sobic007G126600 Sobic002G145101 Sobic002G145101 Sobic001G347300--Sobic002G145101 Sobic001G347300--Sobic007G065400 Sobic002G243900 Sobic002G243900 Sobic001G347300--Sobic002G243900 Sobic001G347300--Sobic003G108700 Sobic001G511500 Sobic001G511500 Sobic001G347300--Sobic001G511500 Sobic006G251900 Sobic006G251900 Sobic001G347300--Sobic006G251900 Sobic001G347300--Sobic003G200200 Sobic001G347300--Sobic003G170100 Sobic003G200200--Sobic002G157000 Sobic002G006900 Sobic002G006900 Sobic003G200200--Sobic002G006900 Sobic003G200200--Sobic003G268300 Sobic001G251700 Sobic001G251700 Sobic003G200200--Sobic001G251700 Sobic007G096600 Sobic007G096600 Sobic003G200200--Sobic007G096600 Sobic003G200200--Sobic002G248400 Sobic003G200200--Sobic001G155000 Sobic008G173900 Sobic008G173900 Sobic003G200200--Sobic008G173900 Sobic003G200200--Sobic003G170100 Sobic006G013500--Sobic001G206100 Sobic001G257300 Sobic001G257300 Sobic006G013500--Sobic001G257300 Sobic001G306900 Sobic001G306900 Sobic006G013500--Sobic001G306900 Sobic006G080300 Sobic006G080300 Sobic006G013500--Sobic006G080300 Sobic004G031700 Sobic004G031700 Sobic006G013500--Sobic004G031700 Sobic009G000500 Sobic009G000500 Sobic006G013500--Sobic009G000500 Sobic006G013500--Sobic003G197800 Sobic001G094000 Sobic001G094000 Sobic006G013500--Sobic001G094000 Sobic006G046700 Sobic006G046700 Sobic006G013500--Sobic006G046700 Sobic008G047800 Sobic008G047800 Sobic001G155000--Sobic008G047800 Sobic001G155000--Sobic002G006900 Sobic001G155000--Sobic003G200200 Sobic009G040600 Sobic009G040600 Sobic001G155000--Sobic009G040600 Sobic001G222500 Sobic001G222500 Sobic001G155000--Sobic001G222500 Sobic007G011300 Sobic007G011300 Sobic001G155000--Sobic007G011300 Sobic008G153000 Sobic008G153000 Sobic001G155000--Sobic008G153000 Sobic010G053800 Sobic010G053800 Sobic001G155000--Sobic010G053800 Sobic007G217000 Sobic007G217000 Sobic001G155000--Sobic007G217000 Sobic003G241200--Sobic004G084300 Sobic006G165000 Sobic006G165000 Sobic003G241200--Sobic006G165000 Sobic003G241200--Sobic006G032400 Sobic003G241200--Sobic002G248400 Sobic003G241200--Sobic002G320500 Sobic003G241200--Sobic003G173950 Sobic010G236400 Sobic010G236400 Sobic003G241200--Sobic010G236400 Sobic003G241200--Sobic003G200200 Sobic003G241200--Sobic002G157000 Sobic005G110472 Sobic005G110472 Sobic003G170100--Sobic005G110472 Sobic003G170100--Sobic003G268300 Sobic003G170100--Sobic003G200200 Sobic003G170100--Sobic007G096600 Sobic002G144933 Sobic002G144933 Sobic003G170100--Sobic002G144933 Sobic003G170100--Sobic002G157000 Sobic001G152320 Sobic001G152320 Sobic003G170100--Sobic001G152320 Sobic007G137900 Sobic007G137900 Sobic003G170100--Sobic007G137900 Sobic001G162300 Sobic001G162300 Sobic003G170100--Sobic001G162300 Sobic003G268300--Sobic007G096600 Sobic003G268300--Sobic002G157000 Sobic003G268300--Sobic001G420200 Sobic003G268300--Sobic003G200200 Sobic003G268300--Sobic002G248400 Sobic009G127900 Sobic009G127900 Sobic003G268300--Sobic009G127900 Sobic007G178700 Sobic007G178700 Sobic003G268300--Sobic007G178700 Sobic007G037900 Sobic007G037900 Sobic003G268300--Sobic007G037900 Sobic003G268300--Sobic008G173900
Octagon: transcription factors


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