Gene annotation
Transcriptome id Sobic.007G221500.2,Sobic.007G221500.3,Sobic.007G221500.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6PJ61 , A0A1B6PJ46 , A0A1B6PJ70
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G42700 : -
RAP-DB (Rice) LOC_Os11g06810.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G138750 - -
2 Sobic.007G184800 transcription factor RF2a, putative, expressed -
3 Sobic.003G213000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
4 Sobic.003G428000 expressed protein -
5 Sobic.004G081900 OsSub12 - Putative Subtilisin homologue, expressed -
6 Sobic.008G069300 - -
7 Sobic.010G146000 CSLD5 - cellulose synthase-like family D, expressed -
8 Sobic.010G130601 - -
9 Sobic.010G109800 - -
10 Sobic.006G117700 - -
11 Sobic.001G521700 - -
12 Sobic.004G082800 GRAM and C2 domains containing protein, putative, expressed -
13 Sobic.008G100600 pattern formation protein EMB30, putative, expressed K18443: golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
14 Sobic.001G257200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
15 Sobic.001G057400 expressed protein -
16 Sobic.004G011900 - -
17 Sobic.007G077532 - K08597: SENP8, NEDP1, sentrin-specific protease 8
18 Sobic.010G255900 DNL zinc finger domain containing protein, putative, expressed K17808: ZIM17, DNLZ, mitochondrial protein import protein ZIM17
19 Sobic.001G024400 pectinesterase inhibitor domain containing protein, expressed -
20 Sobic.005G076800 OsFBX412 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic007G221500 Sobic007G221500 Sobic004G138750 Sobic004G138750 Sobic007G221500--Sobic004G138750 Sobic007G184800 Sobic007G184800 Sobic007G221500--Sobic007G184800 Sobic003G213000 Sobic003G213000 Sobic007G221500--Sobic003G213000 Sobic003G428000 Sobic003G428000 Sobic007G221500--Sobic003G428000 Sobic004G081900 Sobic004G081900 Sobic007G221500--Sobic004G081900 Sobic008G069300 Sobic008G069300 Sobic007G221500--Sobic008G069300 Sobic010G146000 Sobic010G146000 Sobic007G221500--Sobic010G146000 Sobic010G130601 Sobic010G130601 Sobic007G221500--Sobic010G130601 Sobic010G109800 Sobic010G109800 Sobic007G221500--Sobic010G109800 Sobic005G110424 Sobic005G110424 Sobic004G138750--Sobic005G110424 Sobic001G398200 Sobic001G398200 Sobic004G138750--Sobic001G398200 Sobic001G024400 Sobic001G024400 Sobic004G138750--Sobic001G024400 Sobic006G143700 Sobic006G143700 Sobic004G138750--Sobic006G143700 Sobic001G519600 Sobic001G519600 Sobic004G138750--Sobic001G519600 Sobic009G061500 Sobic009G061500 Sobic004G138750--Sobic009G061500 Sobic008G148600 Sobic008G148600 Sobic004G138750--Sobic008G148600 Sobic002G389600 Sobic002G389600 Sobic004G138750--Sobic002G389600 Sobic008G136601 Sobic008G136601 Sobic004G138750--Sobic008G136601 Sobic003G091600 Sobic003G091600 Sobic007G184800--Sobic003G091600 Sobic007G184800--Sobic003G213000 Sobic003G289100 Sobic003G289100 Sobic007G184800--Sobic003G289100 Sobic004G259300 Sobic004G259300 Sobic007G184800--Sobic004G259300 Sobic004G082800 Sobic004G082800 Sobic007G184800--Sobic004G082800 Sobic007G184800--Sobic001G519600 Sobic010G202200 Sobic010G202200 Sobic007G184800--Sobic010G202200 Sobic009G230800 Sobic009G230800 Sobic007G184800--Sobic009G230800 Sobic007G184800--Sobic010G146000 Sobic008G155500 Sobic008G155500 Sobic003G213000--Sobic008G155500 Sobic003G213000--Sobic010G202200 Sobic002G382300 Sobic002G382300 Sobic003G213000--Sobic002G382300 Sobic003G213000--Sobic001G519600 Sobic003G213000--Sobic009G230800 Sobic010G024400 Sobic010G024400 Sobic003G213000--Sobic010G024400 Sobic003G213000--Sobic005G110424 Sobic008G100600 Sobic008G100600 Sobic003G213000--Sobic008G100600 Sobic006G117700 Sobic006G117700 Sobic003G213000--Sobic006G117700 Sobic001G149000 Sobic001G149000 Sobic003G428000--Sobic001G149000 Sobic009G046900 Sobic009G046900 Sobic003G428000--Sobic009G046900 Sobic004G194400 Sobic004G194400 Sobic003G428000--Sobic004G194400 Sobic008G152700 Sobic008G152700 Sobic003G428000--Sobic008G152700 Sobic010G274800 Sobic010G274800 Sobic003G428000--Sobic010G274800 Sobic009G252300 Sobic009G252300 Sobic003G428000--Sobic009G252300 Sobic003G385300 Sobic003G385300 Sobic003G428000--Sobic003G385300 Sobic003G428000--Sobic004G082800 Sobic002G074800 Sobic002G074800 Sobic003G428000--Sobic002G074800 Sobic002G123400 Sobic002G123400 Sobic004G081900--Sobic002G123400 Sobic008G071700 Sobic008G071700 Sobic004G081900--Sobic008G071700 Sobic005G006900 Sobic005G006900 Sobic004G081900--Sobic005G006900 Sobic003G090200 Sobic003G090200 Sobic004G081900--Sobic003G090200 Sobic002G100300 Sobic002G100300 Sobic004G081900--Sobic002G100300 Sobic005G212300 Sobic005G212300 Sobic004G081900--Sobic005G212300 Sobic003G354850 Sobic003G354850 Sobic004G081900--Sobic003G354850 Sobic004G254700 Sobic004G254700 Sobic004G081900--Sobic004G254700 Sobic002G019300 Sobic002G019300 Sobic004G081900--Sobic002G019300 Sobic008G069300--Sobic009G046900 Sobic008G069300--Sobic002G074800 Sobic008G069300--Sobic003G428000 Sobic009G148600 Sobic009G148600 Sobic008G069300--Sobic009G148600 Sobic008G069300--Sobic010G109800 Sobic009G229400 Sobic009G229400 Sobic008G069300--Sobic009G229400 Sobic003G198900 Sobic003G198900 Sobic008G069300--Sobic003G198900 Sobic009G156800 Sobic009G156800 Sobic008G069300--Sobic009G156800 Sobic006G270000 Sobic006G270000 Sobic008G069300--Sobic006G270000 Sobic004G011900 Sobic004G011900 Sobic010G146000--Sobic004G011900 Sobic010G146000--Sobic008G100600 Sobic008G100300 Sobic008G100300 Sobic010G146000--Sobic008G100300 Sobic010G146000--Sobic003G213000 Sobic001G405100 Sobic001G405100 Sobic010G146000--Sobic001G405100 Sobic010G146000--Sobic005G110424 Sobic010G146000--Sobic004G082800 Sobic010G146000--Sobic010G202200 Sobic008G036600 Sobic008G036600 Sobic010G146000--Sobic008G036600 Sobic010G124900 Sobic010G124900 Sobic010G130601--Sobic010G124900 Sobic010G130601--Sobic006G117700 Sobic010G130601--Sobic001G405100 Sobic002G111100 Sobic002G111100 Sobic010G130601--Sobic002G111100 Sobic001G167600 Sobic001G167600 Sobic010G130601--Sobic001G167600 Sobic006G177700 Sobic006G177700 Sobic010G130601--Sobic006G177700 Sobic003G024100 Sobic003G024100 Sobic010G130601--Sobic003G024100 Sobic010G130601--Sobic008G136601 Sobic006G001100 Sobic006G001100 Sobic010G130601--Sobic006G001100 Sobic001G307500 Sobic001G307500 Sobic010G109800--Sobic001G307500 Sobic001G257200 Sobic001G257200 Sobic010G109800--Sobic001G257200 Sobic006G079800 Sobic006G079800 Sobic010G109800--Sobic006G079800 Sobic005G076800 Sobic005G076800 Sobic010G109800--Sobic005G076800 Sobic003G024400 Sobic003G024400 Sobic010G109800--Sobic003G024400 Sobic001G106800 Sobic001G106800 Sobic010G109800--Sobic001G106800 Sobic006G204400 Sobic006G204400 Sobic010G109800--Sobic006G204400 Sobic002G095600 Sobic002G095600 Sobic010G109800--Sobic002G095600 Sobic002G192800 Sobic002G192800 Sobic010G109800--Sobic002G192800
Octagon: transcription factors


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