Gene annotation
Transcriptome id Sobic.008G038400.1
Synonym Sb08g003310
Functional annotation expressed protein
UniProt C5YRT6
Pfam PF10218
Panther DB PTHR13481
NCBI CDD KOG3136; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G59390 : -
RAP-DB (Rice) LOC_Os11g16560.1 : expressed protein
MaizeGDB (Corn) Zm00025a053899
Brachypodium KQJ88671 , KQJ88673 , KQJ88672 , PNT63730
Barley HORVU4Hr1G014070.6 , HORVU4Hr1G014070.4 , HORVU4Hr1G014070.5 , HORVU4Hr1G014070.2 , HORVU4Hr1G014070.3 , HORVU4Hr1G014070.1
Wheat TraesCS4D02G081400 , TraesCS4D02G081400 , TraesCS4B02G083300 , TraesCS4A02G232500 , TraesCS4A02G232500 , TraesCS4B02G083300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G037000 agenet domain containing protein, putative, expressed -
2 Sobic.010G051200 OsSub49 - Putative Subtilisin homologue, expressed K08653: membrane-bound transcription factor site-1 protease
3 Sobic.004G024700 RNA polymerase II transcription factor B subunit 4, putative, expressed K03143: TFIIH3, GTF2H3, transcription initiation factor TFIIH subunit 3
4 Sobic.002G165800 - -
5 Sobic.007G103600 protein of unknown function DUF1296 domain containing protein, expressed -
6 Sobic.007G147400 - -
7 Sobic.003G444800 expressed protein -
8 Sobic.003G039900 OsFBDUF1 - F-box and DUF domain containing protein, expressed -
9 Sobic.006G186400 ZOS4-12 - C2H2 zinc finger protein, expressed -
10 Sobic.005G207500 AAA-type ATPase family protein, putative, expressed -
11 Sobic.004G180900 PSP domain containing protein, expressed K13128: zinc finger CCHC domain-containing protein 8
12 Sobic.003G059750 - K11797: PHIP, PH-interacting protein
13 Sobic.008G115000 Fibronectin type III domain containing protein, expressed -
14 Sobic.K028600 expressed protein -
15 Sobic.009G249700 expressed protein -
16 Sobic.006G223200 expressed protein K19025: AP5Z1, AP-5 complex subunit zeta-1
17 Sobic.005G056500 integrator complex subunit 3, putative, expressed K13140: integrator complex subunit 3
18 Sobic.009G017200 transporter family protein, putative, expressed K15276: SLC35B2, solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2
19 Sobic.007G018200 RNA recognition motif containing protein, putative, expressed -
20 Sobic.010G213500 ubiquitin carboxyl-terminal hydrolase family protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42


Gene co-expression network
sample Sobic008G038400 Sobic008G038400 Sobic009G037000 Sobic009G037000 Sobic008G038400--Sobic009G037000 Sobic010G051200 Sobic010G051200 Sobic008G038400--Sobic010G051200 Sobic004G024700 Sobic004G024700 Sobic008G038400--Sobic004G024700 Sobic002G165800 Sobic002G165800 Sobic008G038400--Sobic002G165800 Sobic007G103600 Sobic007G103600 Sobic008G038400--Sobic007G103600 Sobic007G147400 Sobic007G147400 Sobic008G038400--Sobic007G147400 Sobic003G444800 Sobic003G444800 Sobic008G038400--Sobic003G444800 Sobic003G039900 Sobic003G039900 Sobic008G038400--Sobic003G039900 Sobic006G186400 Sobic006G186400 Sobic008G038400--Sobic006G186400 Sobic009G037000--Sobic008G038400 Sobic009G037000--Sobic004G024700 Sobic006G223200 Sobic006G223200 Sobic009G037000--Sobic006G223200 Sobic007G029600 Sobic007G029600 Sobic009G037000--Sobic007G029600 Sobic009G037000--Sobic006G186400 Sobic010G063300 Sobic010G063300 Sobic009G037000--Sobic010G063300 Sobic003G001400 Sobic003G001400 Sobic009G037000--Sobic003G001400 Sobic009G037000--Sobic007G147400 Sobic003G365700 Sobic003G365700 Sobic009G037000--Sobic003G365700 SobicK028600 SobicK028600 Sobic010G051200--SobicK028600 Sobic010G051200--Sobic003G444800 Sobic004G357100 Sobic004G357100 Sobic010G051200--Sobic004G357100 Sobic008G153000 Sobic008G153000 Sobic010G051200--Sobic008G153000 Sobic008G149800 Sobic008G149800 Sobic010G051200--Sobic008G149800 Sobic007G061700 Sobic007G061700 Sobic010G051200--Sobic007G061700 Sobic007G042400 Sobic007G042400 Sobic010G051200--Sobic007G042400 Sobic002G103600 Sobic002G103600 Sobic010G051200--Sobic002G103600 Sobic010G051200--Sobic007G147400 Sobic004G024700--Sobic007G147400 Sobic005G013200 Sobic005G013200 Sobic004G024700--Sobic005G013200 Sobic004G024700--Sobic007G103600 Sobic004G024700--Sobic006G186400 Sobic009G017200 Sobic009G017200 Sobic004G024700--Sobic009G017200 Sobic004G024700--Sobic002G165800 Sobic004G024700--Sobic002G103600 Sobic002G063900 Sobic002G063900 Sobic004G024700--Sobic002G063900 Sobic001G295500 Sobic001G295500 Sobic004G024700--Sobic001G295500 Sobic004G209700 Sobic004G209700 Sobic002G165800--Sobic004G209700 Sobic005G207500 Sobic005G207500 Sobic002G165800--Sobic005G207500 Sobic006G096900 Sobic006G096900 Sobic002G165800--Sobic006G096900 Sobic010G077500 Sobic010G077500 Sobic002G165800--Sobic010G077500 Sobic010G226000 Sobic010G226000 Sobic002G165800--Sobic010G226000 Sobic002G165800--Sobic007G103600 Sobic009G228000 Sobic009G228000 Sobic002G165800--Sobic009G228000 Sobic006G056700 Sobic006G056700 Sobic002G165800--Sobic006G056700 Sobic009G092400 Sobic009G092400 Sobic002G165800--Sobic009G092400 Sobic003G059750 Sobic003G059750 Sobic007G103600--Sobic003G059750 Sobic007G103600--Sobic005G207500 Sobic005G118600 Sobic005G118600 Sobic007G103600--Sobic005G118600 Sobic007G103600--Sobic003G444800 Sobic002G071500 Sobic002G071500 Sobic007G103600--Sobic002G071500 Sobic007G103600--Sobic008G153000 Sobic003G119000 Sobic003G119000 Sobic007G103600--Sobic003G119000 Sobic002G264200 Sobic002G264200 Sobic007G103600--Sobic002G264200 Sobic006G032500 Sobic006G032500 Sobic007G103600--Sobic006G032500 Sobic007G147400--SobicK028600 Sobic007G147400--Sobic002G063900 Sobic002G317400 Sobic002G317400 Sobic007G147400--Sobic002G317400 Sobic007G147400--Sobic003G444800 Sobic001G376200 Sobic001G376200 Sobic007G147400--Sobic001G376200 Sobic002G147100 Sobic002G147100 Sobic007G147400--Sobic002G147100 Sobic007G147400--Sobic002G103600 Sobic007G147400--Sobic003G039900 Sobic002G357700 Sobic002G357700 Sobic007G147400--Sobic002G357700 Sobic003G444800--SobicK028600 Sobic003G444800--Sobic003G059750 Sobic003G444800--Sobic002G103600 Sobic003G444800--Sobic004G357100 Sobic003G444800--Sobic007G042400 Sobic002G112700 Sobic002G112700 Sobic003G444800--Sobic002G112700 Sobic010G279450 Sobic010G279450 Sobic003G444800--Sobic010G279450 Sobic006G234700 Sobic006G234700 Sobic003G444800--Sobic006G234700 Sobic003G444800--Sobic001G376200 Sobic001G141400 Sobic001G141400 Sobic003G039900--Sobic001G141400 Sobic003G039900--Sobic007G147400 Sobic003G039900--Sobic006G234700 Sobic003G039900--Sobic003G444800 Sobic004G111700 Sobic004G111700 Sobic003G039900--Sobic004G111700 Sobic003G039900--Sobic002G103600 Sobic003G039900--Sobic009G228000 Sobic001G376100 Sobic001G376100 Sobic003G039900--Sobic001G376100 Sobic003G039900--Sobic001G376200 Sobic006G186400--Sobic008G153000 Sobic001G176200 Sobic001G176200 Sobic006G186400--Sobic001G176200 Sobic004G067700 Sobic004G067700 Sobic006G186400--Sobic004G067700 Sobic008G173100 Sobic008G173100 Sobic006G186400--Sobic008G173100 Sobic007G056500 Sobic007G056500 Sobic006G186400--Sobic007G056500 Sobic002G260400 Sobic002G260400 Sobic006G186400--Sobic002G260400 Sobic006G046700 Sobic006G046700 Sobic006G186400--Sobic006G046700 Sobic003G073000 Sobic003G073000 Sobic006G186400--Sobic003G073000 Sobic001G408700 Sobic001G408700 Sobic006G186400--Sobic001G408700
Octagon: transcription factors


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