Gene annotation
Transcriptome id Sobic.009G002600.1
Synonym PGIP1, ATPGIP1, Sb09g000450
Functional annotation polygalacturonase inhibitor precursor, putative, expressed
UniProt C5YXZ4
Pfam PF08263 PF00560
Panther DB PTHR27000 PTHR27000:SF57
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G06860 : polygalacturonase inhibiting protein 1
RAP-DB (Rice) LOC_Os05g01380.1 : polygalacturonase inhibitor precursor, putative, expressed
MaizeGDB (Corn) Zm00025a041002
Brachypodium -
Barley HORVU3Hr1G098730.2 , HORVU3Hr1G098730.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G151400 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
2 Sobic.002G377000 EF hand family protein, expressed -
3 Sobic.009G114500 thiamin pyrophosphokinase 1, putative, expressed K00949: thiN, TPK1, thiamine pyrophosphokinase
4 Sobic.003G116700 hydrolase, alpha/beta fold family domain containing protein, expressed -
5 Sobic.008G106800 isoflavone reductase, putative, expressed -
6 Sobic.001G071100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed K09539: DnaJ homolog subfamily C member 19
7 Sobic.001G311000 expansin precursor, putative, expressed -
8 Sobic.002G421600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed -
9 Sobic.007G126100 trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
10 Sobic.006G241600 expressed protein -
11 Sobic.009G100800 expressed protein -
12 Sobic.001G206000 acyltransferase, putative, expressed K00655: 1-acyl-sn-glycerol-3-phosphate acyltransferase
13 Sobic.004G279700 expressed protein -
14 Sobic.004G164500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
15 Sobic.001G076000 PHLOEM 2-LIKE A10, putative, expressed -
16 Sobic.003G271201 - -
17 Sobic.006G160600 histidine triad family protein, putative, expressed -
18 Sobic.005G064600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
19 Sobic.004G274700 SNARE associated Golgi protein, putative, expressed -
20 Sobic.006G241400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic009G002600 Sobic009G002600 Sobic004G151400 Sobic004G151400 Sobic009G002600--Sobic004G151400 Sobic002G377000 Sobic002G377000 Sobic009G002600--Sobic002G377000 Sobic009G114500 Sobic009G114500 Sobic009G002600--Sobic009G114500 Sobic003G116700 Sobic003G116700 Sobic009G002600--Sobic003G116700 Sobic008G106800 Sobic008G106800 Sobic009G002600--Sobic008G106800 Sobic001G071100 Sobic001G071100 Sobic009G002600--Sobic001G071100 Sobic001G311000 Sobic001G311000 Sobic009G002600--Sobic001G311000 Sobic002G421600 Sobic002G421600 Sobic009G002600--Sobic002G421600 Sobic007G126100 Sobic007G126100 Sobic009G002600--Sobic007G126100 Sobic001G131400 Sobic001G131400 Sobic004G151400--Sobic001G131400 Sobic009G131100 Sobic009G131100 Sobic004G151400--Sobic009G131100 Sobic008G127500 Sobic008G127500 Sobic004G151400--Sobic008G127500 Sobic004G151400--Sobic009G114500 Sobic010G135000 Sobic010G135000 Sobic004G151400--Sobic010G135000 Sobic004G293100 Sobic004G293100 Sobic004G151400--Sobic004G293100 Sobic001G339801 Sobic001G339801 Sobic004G151400--Sobic001G339801 Sobic005G011400 Sobic005G011400 Sobic004G151400--Sobic005G011400 Sobic004G265700 Sobic004G265700 Sobic004G151400--Sobic004G265700 Sobic001G082300 Sobic001G082300 Sobic002G377000--Sobic001G082300 Sobic004G088000 Sobic004G088000 Sobic002G377000--Sobic004G088000 Sobic003G406900 Sobic003G406900 Sobic002G377000--Sobic003G406900 Sobic004G164500 Sobic004G164500 Sobic002G377000--Sobic004G164500 Sobic006G241300 Sobic006G241300 Sobic002G377000--Sobic006G241300 Sobic004G229300 Sobic004G229300 Sobic002G377000--Sobic004G229300 Sobic002G205300 Sobic002G205300 Sobic002G377000--Sobic002G205300 Sobic002G377000--Sobic001G311000 Sobic001G253600 Sobic001G253600 Sobic002G377000--Sobic001G253600 Sobic009G114500--Sobic004G151400 Sobic009G114500--Sobic001G131400 Sobic002G073800 Sobic002G073800 Sobic009G114500--Sobic002G073800 Sobic004G196300 Sobic004G196300 Sobic009G114500--Sobic004G196300 Sobic009G062000 Sobic009G062000 Sobic009G114500--Sobic009G062000 Sobic010G237000 Sobic010G237000 Sobic009G114500--Sobic010G237000 Sobic002G335300 Sobic002G335300 Sobic009G114500--Sobic002G335300 Sobic010G018400 Sobic010G018400 Sobic009G114500--Sobic010G018400 Sobic009G114500--Sobic004G293100 Sobic001G206000 Sobic001G206000 Sobic003G116700--Sobic001G206000 Sobic001G149700 Sobic001G149700 Sobic003G116700--Sobic001G149700 Sobic001G441600 Sobic001G441600 Sobic003G116700--Sobic001G441600 Sobic007G079700 Sobic007G079700 Sobic003G116700--Sobic007G079700 Sobic004G014000 Sobic004G014000 Sobic003G116700--Sobic004G014000 Sobic007G126200 Sobic007G126200 Sobic003G116700--Sobic007G126200 Sobic009G065000 Sobic009G065000 Sobic003G116700--Sobic009G065000 Sobic010G055500 Sobic010G055500 Sobic003G116700--Sobic010G055500 Sobic001G078500 Sobic001G078500 Sobic003G116700--Sobic001G078500 Sobic008G106800--Sobic004G164500 Sobic001G471900 Sobic001G471900 Sobic008G106800--Sobic001G471900 Sobic001G056700 Sobic001G056700 Sobic008G106800--Sobic001G056700 Sobic008G106800--Sobic009G065000 Sobic003G273100 Sobic003G273100 Sobic008G106800--Sobic003G273100 Sobic003G137400 Sobic003G137400 Sobic008G106800--Sobic003G137400 Sobic008G106800--Sobic001G311000 Sobic002G278300 Sobic002G278300 Sobic008G106800--Sobic002G278300 Sobic001G230700 Sobic001G230700 Sobic008G106800--Sobic001G230700 Sobic010G176600 Sobic010G176600 Sobic001G071100--Sobic010G176600 Sobic001G423800 Sobic001G423800 Sobic001G071100--Sobic001G423800 Sobic002G282400 Sobic002G282400 Sobic001G071100--Sobic002G282400 Sobic001G015100 Sobic001G015100 Sobic001G071100--Sobic001G015100 Sobic002G393000 Sobic002G393000 Sobic001G071100--Sobic002G393000 Sobic002G183200 Sobic002G183200 Sobic001G071100--Sobic002G183200 Sobic004G301000 Sobic004G301000 Sobic001G071100--Sobic004G301000 Sobic001G119400 Sobic001G119400 Sobic001G071100--Sobic001G119400 Sobic004G221500 Sobic004G221500 Sobic001G071100--Sobic004G221500 Sobic001G311000--Sobic004G164500 Sobic001G311000--Sobic009G065000 Sobic006G191600 Sobic006G191600 Sobic001G311000--Sobic006G191600 Sobic007G177100 Sobic007G177100 Sobic001G311000--Sobic007G177100 Sobic003G402300 Sobic003G402300 Sobic001G311000--Sobic003G402300 Sobic001G311000--Sobic007G126100 Sobic001G311000--Sobic008G106800 Sobic006G257900 Sobic006G257900 Sobic001G311000--Sobic006G257900 Sobic003G293900 Sobic003G293900 Sobic001G311000--Sobic003G293900 Sobic002G421600--Sobic007G126100 Sobic006G269200 Sobic006G269200 Sobic002G421600--Sobic006G269200 Sobic002G421600--Sobic007G177100 Sobic002G254200 Sobic002G254200 Sobic002G421600--Sobic002G254200 Sobic003G034400 Sobic003G034400 Sobic002G421600--Sobic003G034400 Sobic002G421600--Sobic003G293900 Sobic001G225200 Sobic001G225200 Sobic002G421600--Sobic001G225200 Sobic006G047000 Sobic006G047000 Sobic002G421600--Sobic006G047000 Sobic006G241600 Sobic006G241600 Sobic002G421600--Sobic006G241600 Sobic007G126100--Sobic007G177100 Sobic004G212900 Sobic004G212900 Sobic007G126100--Sobic004G212900 Sobic007G126100--Sobic002G421600 Sobic007G126100--Sobic002G254200 Sobic009G016201 Sobic009G016201 Sobic007G126100--Sobic009G016201 Sobic009G159200 Sobic009G159200 Sobic007G126100--Sobic009G159200 Sobic004G172700 Sobic004G172700 Sobic007G126100--Sobic004G172700 Sobic006G157500 Sobic006G157500 Sobic007G126100--Sobic006G157500 Sobic007G126100--Sobic002G282400
Octagon: transcription factors


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