Gene annotation
Transcriptome id Sobic.009G006100.1
Synonym ACT7, Sb09g000750
Functional annotation actin, putative, expressed
UniProt -
Pfam PF00022
Panther DB PTHR11937 PTHR11937:SF200
NCBI CDD -
KEGG Orthology K10355; actin, other eukaryote
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G09810 : actin 7
RAP-DB (Rice) LOC_Os05g01600.2 : actin, putative, expressed
MaizeGDB (Corn) Zm00025a040979 , Zm00025a020451 , Zm00025a040977 , Zm00025a039570 , Zm00025a012921 , Zm00025a038281 , Zm00025a038282 , Zm00025a026721
Brachypodium PNT73248 , KQJ97425 , KQK06042 , KQK06041 , KQK10759 , KQJ92134 , KQK08099
Barley HORVU3Hr1G083380.3 , HORVU3Hr1G083380.1 , HORVU3Hr1G083380.6 , HORVU3Hr1G083380.5 , HORVU3Hr1G083380.4 , HORVU1Hr1G074350.1 , HORVU1Hr1G074350.2 , HORVU1Hr1G074350.3 , HORVU5Hr1G039850.8 , HORVU5Hr1G039850.1 , HORVU5Hr1G039850.2 , HORVU5Hr1G039850.3 , HORVU5Hr1G039850.4 , HORVU5Hr1G039850.5 , HORVU5Hr1G039850.6 , HORVU5Hr1G039850.7 , HORVU5Hr1G117900.5 , HORVU5Hr1G117900.4 , HORVU5Hr1G117900.1 , HORVU5Hr1G117900.3 , HORVU1Hr1G002840.1 , HORVU1Hr1G002840.3 , HORVU1Hr1G002840.2 , HORVU1Hr1G002840.5 , HORVU1Hr1G002840.4 , HORVU1Hr1G002840.7 , HORVU1Hr1G002840.6
Wheat TraesCS5B02G124100 , TraesCS3B02G410000 , TraesCS3B02G410000 , TraesCS1B02G283900 , TraesCS1A02G020500 , TraesCS1A02G020500 , TraesCS4A02G356100 , TraesCS1A02G274400 , TraesCS4A02G356100 , TraesCS5D02G516200 , TraesCS3A02G377300 , TraesCS5A02G124300 , TraesCS5A02G124300 , TraesCS1D02G274400 , TraesCS1D02G020000 , TraesCS5D02G132200 , TraesCS1B02G024500 , TraesCS5B02G516100
Populus PNT57598 , PNT13527 , PNT57597 , PNS89844 , PNT57599 , PNT57600 , PNT57601 , PNT57602 , PNT57603 , PNT60125 , PNT60124 , PNT60123


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cDNA sequences
Sobic.009G006100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G078800 expressed protein -
2 Sobic.001G371400 nascent polypeptide-associated complex subunit alpha, putative, expressed K03626: EGD2, nascent polypeptide-associated complex subunit alpha
3 Sobic.001G505100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
4 Sobic.007G090463 - K08235: xyloglucan:xyloglucosyl transferase
5 Sobic.002G224400 D-mannose binding lectin family protein, expressed -
6 Sobic.001G328800 expressed protein -
7 Sobic.007G192700 nascent polypeptide-associated complex subunit alpha, putative, expressed K03626: EGD2, nascent polypeptide-associated complex subunit alpha
8 Sobic.009G159200 guanylyl cyclase, putative, expressed -
9 Sobic.006G169200 homeobox associated leucine zipper, putative, expressed -
10 Sobic.003G068000 expressed protein -
11 Sobic.001G009500 - -
12 Sobic.004G226200 expressed protein -
13 Sobic.002G043300 syntaxin, putative, expressed K08486: syntaxin 1B/2/3
14 Sobic.002G218300 expressed protein -
15 Sobic.007G197600 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
16 Sobic.003G194200 ZmGR2c, putative, expressed -
17 Sobic.003G344600 BAG domain containing protein, expressed -
18 Sobic.004G152400 ribosomal protein L29, putative, expressed K02918: RP-L35e, large subunit ribosomal protein L35e
19 Sobic.004G345500 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
20 Sobic.007G224400 bZIP transcription factor domain containing protein, expressed -


Gene co-expression network
sample Sobic009G006100 Sobic009G006100 Sobic005G078800 Sobic005G078800 Sobic009G006100--Sobic005G078800 Sobic001G371400 Sobic001G371400 Sobic009G006100--Sobic001G371400 Sobic001G505100 Sobic001G505100 Sobic009G006100--Sobic001G505100 Sobic007G090463 Sobic007G090463 Sobic009G006100--Sobic007G090463 Sobic002G224400 Sobic002G224400 Sobic009G006100--Sobic002G224400 Sobic001G328800 Sobic001G328800 Sobic009G006100--Sobic001G328800 Sobic007G192700 Sobic007G192700 Sobic009G006100--Sobic007G192700 Sobic009G159200 Sobic009G159200 Sobic009G006100--Sobic009G159200 Sobic006G169200 Sobic006G169200 Sobic009G006100--Sobic006G169200 Sobic005G078800--Sobic001G328800 Sobic004G262200 Sobic004G262200 Sobic005G078800--Sobic004G262200 Sobic006G260200 Sobic006G260200 Sobic005G078800--Sobic006G260200 Sobic001G247600 Sobic001G247600 Sobic005G078800--Sobic001G247600 Sobic006G059700 Sobic006G059700 Sobic005G078800--Sobic006G059700 Sobic003G371750 Sobic003G371750 Sobic005G078800--Sobic003G371750 Sobic010G003700 Sobic010G003700 Sobic005G078800--Sobic010G003700 Sobic004G225900 Sobic004G225900 Sobic005G078800--Sobic004G225900 Sobic004G069200 Sobic004G069200 Sobic005G078800--Sobic004G069200 Sobic001G371400--Sobic007G192700 Sobic002G286900 Sobic002G286900 Sobic001G371400--Sobic002G286900 Sobic010G060500 Sobic010G060500 Sobic001G371400--Sobic010G060500 Sobic006G260400 Sobic006G260400 Sobic001G371400--Sobic006G260400 Sobic004G008400 Sobic004G008400 Sobic001G371400--Sobic004G008400 Sobic007G197800 Sobic007G197800 Sobic001G371400--Sobic007G197800 Sobic009G050300 Sobic009G050300 Sobic001G371400--Sobic009G050300 Sobic003G346600 Sobic003G346600 Sobic001G371400--Sobic003G346600 Sobic002G255300 Sobic002G255300 Sobic001G371400--Sobic002G255300 Sobic004G345500 Sobic004G345500 Sobic001G505100--Sobic004G345500 Sobic004G152400 Sobic004G152400 Sobic001G505100--Sobic004G152400 Sobic004G103800 Sobic004G103800 Sobic001G505100--Sobic004G103800 Sobic007G019000 Sobic007G019000 Sobic001G505100--Sobic007G019000 Sobic010G230700 Sobic010G230700 Sobic001G505100--Sobic010G230700 Sobic007G018300 Sobic007G018300 Sobic001G505100--Sobic007G018300 Sobic002G330000 Sobic002G330000 Sobic001G505100--Sobic002G330000 Sobic003G344600 Sobic003G344600 Sobic001G505100--Sobic003G344600 Sobic002G115000 Sobic002G115000 Sobic001G505100--Sobic002G115000 Sobic002G339100 Sobic002G339100 Sobic007G090463--Sobic002G339100 Sobic001G431500 Sobic001G431500 Sobic007G090463--Sobic001G431500 Sobic006G157500 Sobic006G157500 Sobic007G090463--Sobic006G157500 Sobic007G090463--Sobic001G505100 Sobic003G402300 Sobic003G402300 Sobic007G090463--Sobic003G402300 Sobic003G260300 Sobic003G260300 Sobic007G090463--Sobic003G260300 Sobic003G049700 Sobic003G049700 Sobic007G090463--Sobic003G049700 Sobic007G192300 Sobic007G192300 Sobic007G090463--Sobic007G192300 Sobic007G090463--Sobic004G345500 Sobic001G009500 Sobic001G009500 Sobic002G224400--Sobic001G009500 Sobic009G143400 Sobic009G143400 Sobic002G224400--Sobic009G143400 Sobic003G379800 Sobic003G379800 Sobic002G224400--Sobic003G379800 Sobic001G389000 Sobic001G389000 Sobic002G224400--Sobic001G389000 Sobic003G417200 Sobic003G417200 Sobic002G224400--Sobic003G417200 Sobic008G186100 Sobic008G186100 Sobic002G224400--Sobic008G186100 Sobic003G343900 Sobic003G343900 Sobic002G224400--Sobic003G343900 Sobic004G075000 Sobic004G075000 Sobic002G224400--Sobic004G075000 Sobic002G329000 Sobic002G329000 Sobic002G224400--Sobic002G329000 Sobic006G157900 Sobic006G157900 Sobic001G328800--Sobic006G157900 Sobic010G270500 Sobic010G270500 Sobic001G328800--Sobic010G270500 Sobic001G328800--Sobic006G260200 Sobic003G311800 Sobic003G311800 Sobic001G328800--Sobic003G311800 Sobic001G328800--Sobic004G262200 Sobic003G007600 Sobic003G007600 Sobic001G328800--Sobic003G007600 Sobic003G299300 Sobic003G299300 Sobic001G328800--Sobic003G299300 Sobic006G235200 Sobic006G235200 Sobic001G328800--Sobic006G235200 Sobic010G270700 Sobic010G270700 Sobic001G328800--Sobic010G270700 Sobic007G192700--Sobic001G371400 Sobic001G493001 Sobic001G493001 Sobic007G192700--Sobic001G493001 Sobic004G055700 Sobic004G055700 Sobic007G192700--Sobic004G055700 Sobic003G150000 Sobic003G150000 Sobic007G192700--Sobic003G150000 Sobic001G361600 Sobic001G361600 Sobic007G192700--Sobic001G361600 Sobic007G192700--Sobic004G008400 Sobic003G078200 Sobic003G078200 Sobic007G192700--Sobic003G078200 Sobic001G018900 Sobic001G018900 Sobic007G192700--Sobic001G018900 Sobic006G067800 Sobic006G067800 Sobic007G192700--Sobic006G067800 Sobic007G197600 Sobic007G197600 Sobic009G159200--Sobic007G197600 Sobic007G177100 Sobic007G177100 Sobic009G159200--Sobic007G177100 Sobic002G353800 Sobic002G353800 Sobic009G159200--Sobic002G353800 Sobic001G070800 Sobic001G070800 Sobic009G159200--Sobic001G070800 Sobic009G159200--Sobic006G157500 Sobic009G075900 Sobic009G075900 Sobic009G159200--Sobic009G075900 Sobic009G159200--Sobic003G379800 Sobic003G393700 Sobic003G393700 Sobic009G159200--Sobic003G393700 Sobic004G203700 Sobic004G203700 Sobic009G159200--Sobic004G203700 Sobic001G311000 Sobic001G311000 Sobic006G169200--Sobic001G311000 Sobic004G164500 Sobic004G164500 Sobic006G169200--Sobic004G164500 Sobic009G065000 Sobic009G065000 Sobic006G169200--Sobic009G065000 Sobic001G032100 Sobic001G032100 Sobic006G169200--Sobic001G032100 Sobic001G471900 Sobic001G471900 Sobic006G169200--Sobic001G471900 Sobic001G082300 Sobic001G082300 Sobic006G169200--Sobic001G082300 Sobic006G124000 Sobic006G124000 Sobic006G169200--Sobic006G124000 Sobic001G225100 Sobic001G225100 Sobic006G169200--Sobic001G225100 Sobic003G296600 Sobic003G296600 Sobic006G169200--Sobic003G296600
Octagon: transcription factors


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