Gene annotation
Transcriptome id Sobic.006G169200.1
Synonym HB4, Sb06g024480, ATHB4, ATHB-4
Functional annotation homeobox associated leucine zipper, putative, expressed
UniProt C5YDG3
Pfam PF00046 PF02183
Panther DB PTHR24326:SF199 PTHR24326
NCBI CDD KOG0483; Transcription factor HEX, contains HOX and HALZ domains
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding GO:0003700DNA-binding transcription factor activity GO:0006355regulation of transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT3G60390 : homeobox-leucine zipper protein 3
RAP-DB (Rice) LOC_Os04g46350.1 : homeobox associated leucine zipper, putative, expressed
MaizeGDB (Corn) Zm00025a001412 , Zm00025a005382 , Zm00025a003364 , Zm00025a010325 , Zm00025a017100 , Zm00025a052979 , Zm00025a047209 , Zm00025a014052 , Zm00025a050084 , Zm00025a050086 , Zm00025a031666
Brachypodium KQJ90458 , KQJ83922 , PNT76669 , KQK19923 , KQJ97808 , KQJ98582 , KQK22747
Barley HORVU5Hr1G067010.13 , HORVU5Hr1G067010.10 , HORVU5Hr1G067010.15 , HORVU5Hr1G067010.14 , HORVU4Hr1G065900.7 , HORVU1Hr1G055930.1 , HORVU1Hr1G055930.3 , HORVU1Hr1G055930.2 , HORVU1Hr1G055930.5 , HORVU4Hr1G065900.4 , HORVU1Hr1G055930.6 , HORVU5Hr1G067010.12 , HORVU2Hr1G097940.5 , HORVU2Hr1G097940.4 , HORVU2Hr1G097940.7 , HORVU2Hr1G097940.6 , HORVU2Hr1G097940.1 , HORVU2Hr1G097940.3 , HORVU2Hr1G097940.2 , HORVU2Hr1G097940.9 , HORVU2Hr1G097940.8 , HORVU5Hr1G067010.11 , HORVU1Hr1G055930.4 , HORVU5Hr1G067010.9 , HORVU5Hr1G067010.3 , HORVU5Hr1G067010.2 , HORVU5Hr1G067010.1 , HORVU5Hr1G067010.7 , HORVU5Hr1G067010.6 , HORVU5Hr1G067010.4 , HORVU5Hr1G049790.1 , HORVU5Hr1G049790.2 , HORVU2Hr1G097940.11 , HORVU2Hr1G097940.10 , HORVU4Hr1G065900.6 , HORVU4Hr1G065900.3 , HORVU4Hr1G065900.1 , HORVU1Hr1G082910.3 , HORVU1Hr1G082910.2 , HORVU4Hr1G065900.5 , HORVU4Hr1G065900.8 , HORVU4Hr1G065900.9 , HORVU7Hr1G098230.2 , HORVU7Hr1G098230.1 , HORVU4Hr1G065900.10
Wheat TraesCS1D02G379700 , TraesCS7A02G423800 , TraesCS7D02G417700 , TraesCS1B02G232700 , TraesCS1D02G220900 , TraesCS2B02G434900 , TraesCS2A02G415900 , TraesCS4A02G059600 , TraesCS7B02G326300 , TraesCS7D02G078800 , TraesCS4A02G382200 , TraesCS4A02G382400 , TraesCS4D02G236600 , TraesCS7A02G084000 , TraesCS1B02G232700 , TraesCS5D02G235300 , TraesCS1A02G372900 , TraesCS4B02G235300 , TraesCS4B02G235300 , TraesCS2D02G412900 , TraesCS1B02G393100 , TraesCS5A02G232700 , TraesCS1A02G219200 , TraesCS7D02G079000 , TraesCS5B02G231300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G311000 expansin precursor, putative, expressed -
2 Sobic.004G164500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
3 Sobic.009G065000 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA15 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
4 Sobic.001G032100 BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
5 Sobic.001G471900 C2 domain containing protein, putative, expressed -
6 Sobic.001G082300 cytochrome P450, putative, expressed -
7 Sobic.006G124000 BTBZ4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with TAZ zinc finger and Calmodulin-binding domains, expressed -
8 Sobic.001G225100 expressed protein -
9 Sobic.003G296600 coiled-coil domain-containing protein 25, putative, expressed -
10 Sobic.001G247400 plant-specific domain TIGR01615 family protein, expressed -
11 Sobic.001G028600 expressed protein -
12 Sobic.008G106800 isoflavone reductase, putative, expressed -
13 Sobic.003G117000 late embryogenesis abundant protein, putative, expressed -
14 Sobic.006G184300 OsFBX148 - F-box domain containing protein, expressed -
15 Sobic.007G150200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MTD1, putative, expressed -
16 Sobic.006G194150 - -
17 Sobic.006G257900 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
18 Sobic.002G108800 auxin efflux carrier component, putative, expressed -
19 Sobic.007G156500 alpha-amylase precursor, putative, expressed K01176: AMY, amyA, alpha-amylase
20 Sobic.006G191600 expressed protein -


Gene co-expression network
sample Sobic006G169200 Sobic006G169200 Sobic001G311000 Sobic001G311000 Sobic006G169200--Sobic001G311000 Sobic004G164500 Sobic004G164500 Sobic006G169200--Sobic004G164500 Sobic009G065000 Sobic009G065000 Sobic006G169200--Sobic009G065000 Sobic001G032100 Sobic001G032100 Sobic006G169200--Sobic001G032100 Sobic001G471900 Sobic001G471900 Sobic006G169200--Sobic001G471900 Sobic001G082300 Sobic001G082300 Sobic006G169200--Sobic001G082300 Sobic006G124000 Sobic006G124000 Sobic006G169200--Sobic006G124000 Sobic001G225100 Sobic001G225100 Sobic006G169200--Sobic001G225100 Sobic003G296600 Sobic003G296600 Sobic006G169200--Sobic003G296600 Sobic001G311000--Sobic004G164500 Sobic001G311000--Sobic009G065000 Sobic006G191600 Sobic006G191600 Sobic001G311000--Sobic006G191600 Sobic007G177100 Sobic007G177100 Sobic001G311000--Sobic007G177100 Sobic003G402300 Sobic003G402300 Sobic001G311000--Sobic003G402300 Sobic007G126100 Sobic007G126100 Sobic001G311000--Sobic007G126100 Sobic008G106800 Sobic008G106800 Sobic001G311000--Sobic008G106800 Sobic006G257900 Sobic006G257900 Sobic001G311000--Sobic006G257900 Sobic003G293900 Sobic003G293900 Sobic001G311000--Sobic003G293900 Sobic004G164500--Sobic001G471900 Sobic004G164500--Sobic001G311000 Sobic004G164500--Sobic009G065000 Sobic004G164500--Sobic008G106800 Sobic001G056700 Sobic001G056700 Sobic004G164500--Sobic001G056700 Sobic010G154150 Sobic010G154150 Sobic004G164500--Sobic010G154150 Sobic004G164500--Sobic006G257900 Sobic010G228600 Sobic010G228600 Sobic004G164500--Sobic010G228600 Sobic004G164500--Sobic007G177100 Sobic009G065000--Sobic004G164500 Sobic009G065000--Sobic001G311000 Sobic001G206000 Sobic001G206000 Sobic009G065000--Sobic001G206000 Sobic009G065000--Sobic008G106800 Sobic009G065000--Sobic006G257900 Sobic009G065000--Sobic001G471900 Sobic009G065000--Sobic007G177100 Sobic009G065000--Sobic010G228600 Sobic003G116700 Sobic003G116700 Sobic009G065000--Sobic003G116700 Sobic001G032100--Sobic003G296600 Sobic005G085600 Sobic005G085600 Sobic001G032100--Sobic005G085600 Sobic001G247400 Sobic001G247400 Sobic001G032100--Sobic001G247400 Sobic006G194150 Sobic006G194150 Sobic001G032100--Sobic006G194150 Sobic004G221900 Sobic004G221900 Sobic001G032100--Sobic004G221900 Sobic003G034500 Sobic003G034500 Sobic001G032100--Sobic003G034500 Sobic001G032100--Sobic003G293900 Sobic001G032100--Sobic001G225100 Sobic009G183500 Sobic009G183500 Sobic001G032100--Sobic009G183500 Sobic001G471900--Sobic001G056700 Sobic001G471900--Sobic004G164500 Sobic001G471900--Sobic008G106800 Sobic001G471900--Sobic010G228600 Sobic001G471900--Sobic010G154150 Sobic002G291300 Sobic002G291300 Sobic001G471900--Sobic002G291300 Sobic001G471900--Sobic006G257900 Sobic010G144400 Sobic010G144400 Sobic001G471900--Sobic010G144400 Sobic003G273100 Sobic003G273100 Sobic001G471900--Sobic003G273100 Sobic002G377000 Sobic002G377000 Sobic001G082300--Sobic002G377000 Sobic001G082300--Sobic001G032100 Sobic002G017300 Sobic002G017300 Sobic001G082300--Sobic002G017300 Sobic008G126200 Sobic008G126200 Sobic001G082300--Sobic008G126200 Sobic001G082300--Sobic003G296600 Sobic001G082300--Sobic006G194150 Sobic003G328800 Sobic003G328800 Sobic001G082300--Sobic003G328800 Sobic001G082300--Sobic004G164500 Sobic006G184300 Sobic006G184300 Sobic001G082300--Sobic006G184300 Sobic006G124000--Sobic006G257900 Sobic006G124000--Sobic006G191600 Sobic010G218100 Sobic010G218100 Sobic006G124000--Sobic010G218100 Sobic006G124000--Sobic010G154150 Sobic006G124000--Sobic001G225100 Sobic003G117000 Sobic003G117000 Sobic006G124000--Sobic003G117000 Sobic002G171500 Sobic002G171500 Sobic006G124000--Sobic002G171500 Sobic006G124000--Sobic001G311000 Sobic001G076000 Sobic001G076000 Sobic006G124000--Sobic001G076000 Sobic007G150200 Sobic007G150200 Sobic001G225100--Sobic007G150200 Sobic001G225100--Sobic003G296600 Sobic001G225100--Sobic001G247400 Sobic001G225100--Sobic001G032100 Sobic001G225100--Sobic006G257900 Sobic001G225100--Sobic009G183500 Sobic003G093600 Sobic003G093600 Sobic001G225100--Sobic003G093600 Sobic002G284200 Sobic002G284200 Sobic001G225100--Sobic002G284200 Sobic001G225100--Sobic004G221900 Sobic003G296600--Sobic001G032100 Sobic003G296600--Sobic003G293900 Sobic003G296600--Sobic001G247400 Sobic003G296600--Sobic004G221900 Sobic003G296600--Sobic001G225100 Sobic003G296600--Sobic006G194150 Sobic002G246600 Sobic002G246600 Sobic003G296600--Sobic002G246600 Sobic001G230700 Sobic001G230700 Sobic003G296600--Sobic001G230700 Sobic003G296600--Sobic006G184300
Octagon: transcription factors


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