Gene annotation
Transcriptome id Sobic.002G218300.1
Synonym Sb02g025990
Functional annotation expressed protein
UniProt C5XDS3
Pfam -
Panther DB PTHR33541 PTHR33541:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os09g27160.1 : expressed protein
MaizeGDB (Corn) Zm00025a014017 , Zm00025a047183
Brachypodium KQJ90440
Barley HORVU5Hr1G061440.4 , HORVU5Hr1G061440.2 , HORVU5Hr1G061440.3 , HORVU5Hr1G061440.1
Wheat -
Populus -


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cDNA sequences
Sobic.002G218300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G130300 AWPM-19-like membrane family protein, putative, expressed -
2 Sobic.003G194200 ZmGR2c, putative, expressed -
3 Sobic.001G071100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed K09539: DnaJ homolog subfamily C member 19
4 Sobic.009G224500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
5 Sobic.007G002800 phospholipase C, putative, expressed -
6 Sobic.003G160700 RALFL8 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
7 Sobic.003G305700 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.002G092600 harpin-induced protein 1 domain containing protein, expressed -
9 Sobic.004G266200 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
10 Sobic.001G481000 expressed protein -
11 Sobic.001G505100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
12 Sobic.001G192200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
13 Sobic.010G042500 expressed protein -
14 Sobic.001G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD dependent epimerase/dehydratase family protein, putative, expressed K10046: GDP-D-mannose 3', 5'-epimerase
15 Sobic.001G310300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
16 Sobic.003G417800 down-regulated TF in developmental senescence(PubMedID : 27586543)@histone-like transcription factor and archaeal histone, putative, expressed -
17 Sobic.007G018300 60S acidic ribosomal protein, putative, expressed K02942: RP-LP1, large subunit ribosomal protein LP1
18 Sobic.006G157900 C2 domain containing protein, putative, expressed -
19 Sobic.004G203700 ubiquitin family protein, putative, expressed -
20 Sobic.001G328800 expressed protein -


Gene co-expression network
sample Sobic002G218300 Sobic002G218300 Sobic009G130300 Sobic009G130300 Sobic002G218300--Sobic009G130300 Sobic003G194200 Sobic003G194200 Sobic002G218300--Sobic003G194200 Sobic001G071100 Sobic001G071100 Sobic002G218300--Sobic001G071100 Sobic009G224500 Sobic009G224500 Sobic002G218300--Sobic009G224500 Sobic007G002800 Sobic007G002800 Sobic002G218300--Sobic007G002800 Sobic003G160700 Sobic003G160700 Sobic002G218300--Sobic003G160700 Sobic003G305700 Sobic003G305700 Sobic002G218300--Sobic003G305700 Sobic002G092600 Sobic002G092600 Sobic002G218300--Sobic002G092600 Sobic004G266200 Sobic004G266200 Sobic002G218300--Sobic004G266200 Sobic003G000200 Sobic003G000200 Sobic009G130300--Sobic003G000200 Sobic009G221800 Sobic009G221800 Sobic009G130300--Sobic009G221800 Sobic003G078900 Sobic003G078900 Sobic009G130300--Sobic003G078900 Sobic001G310300 Sobic001G310300 Sobic009G130300--Sobic001G310300 Sobic003G115200 Sobic003G115200 Sobic009G130300--Sobic003G115200 Sobic001G514200 Sobic001G514200 Sobic009G130300--Sobic001G514200 Sobic003G321400 Sobic003G321400 Sobic009G130300--Sobic003G321400 Sobic001G261460 Sobic001G261460 Sobic009G130300--Sobic001G261460 Sobic010G047600 Sobic010G047600 Sobic009G130300--Sobic010G047600 Sobic001G328800 Sobic001G328800 Sobic003G194200--Sobic001G328800 Sobic001G481000 Sobic001G481000 Sobic003G194200--Sobic001G481000 Sobic002G411900 Sobic002G411900 Sobic003G194200--Sobic002G411900 Sobic003G194200--Sobic009G130300 Sobic004G271400 Sobic004G271400 Sobic003G194200--Sobic004G271400 Sobic001G161601 Sobic001G161601 Sobic003G194200--Sobic001G161601 Sobic003G194200--Sobic003G305700 Sobic003G194200--Sobic002G218300 Sobic009G232100 Sobic009G232100 Sobic003G194200--Sobic009G232100 Sobic010G176600 Sobic010G176600 Sobic001G071100--Sobic010G176600 Sobic001G423800 Sobic001G423800 Sobic001G071100--Sobic001G423800 Sobic002G282400 Sobic002G282400 Sobic001G071100--Sobic002G282400 Sobic001G015100 Sobic001G015100 Sobic001G071100--Sobic001G015100 Sobic002G393000 Sobic002G393000 Sobic001G071100--Sobic002G393000 Sobic002G183200 Sobic002G183200 Sobic001G071100--Sobic002G183200 Sobic004G301000 Sobic004G301000 Sobic001G071100--Sobic004G301000 Sobic001G119400 Sobic001G119400 Sobic001G071100--Sobic001G119400 Sobic004G221500 Sobic004G221500 Sobic001G071100--Sobic004G221500 Sobic001G471200 Sobic001G471200 Sobic009G224500--Sobic001G471200 Sobic006G103000 Sobic006G103000 Sobic009G224500--Sobic006G103000 Sobic009G240600 Sobic009G240600 Sobic009G224500--Sobic009G240600 Sobic002G329000 Sobic002G329000 Sobic009G224500--Sobic002G329000 Sobic001G192200 Sobic001G192200 Sobic009G224500--Sobic001G192200 Sobic009G224500--Sobic007G002800 Sobic001G231700 Sobic001G231700 Sobic009G224500--Sobic001G231700 Sobic004G228500 Sobic004G228500 Sobic009G224500--Sobic004G228500 Sobic005G093000 Sobic005G093000 Sobic009G224500--Sobic005G093000 Sobic004G055100 Sobic004G055100 Sobic007G002800--Sobic004G055100 Sobic002G175100 Sobic002G175100 Sobic007G002800--Sobic002G175100 Sobic004G331400 Sobic004G331400 Sobic007G002800--Sobic004G331400 Sobic009G054800 Sobic009G054800 Sobic007G002800--Sobic009G054800 Sobic007G002800--Sobic006G103000 Sobic010G085800 Sobic010G085800 Sobic007G002800--Sobic010G085800 Sobic002G255300 Sobic002G255300 Sobic007G002800--Sobic002G255300 Sobic007G002800--Sobic001G310300 Sobic003G436700 Sobic003G436700 Sobic007G002800--Sobic003G436700 Sobic005G113300 Sobic005G113300 Sobic003G160700--Sobic005G113300 Sobic004G041900 Sobic004G041900 Sobic003G160700--Sobic004G041900 Sobic003G125650 Sobic003G125650 Sobic003G160700--Sobic003G125650 Sobic003G078200 Sobic003G078200 Sobic003G160700--Sobic003G078200 Sobic001G475500 Sobic001G475500 Sobic003G160700--Sobic001G475500 Sobic001G502900 Sobic001G502900 Sobic003G160700--Sobic001G502900 Sobic004G220000 Sobic004G220000 Sobic003G160700--Sobic004G220000 Sobic009G188000 Sobic009G188000 Sobic003G160700--Sobic009G188000 Sobic003G160700--Sobic003G436700 Sobic003G305700--Sobic010G085800 Sobic006G203700 Sobic006G203700 Sobic003G305700--Sobic006G203700 Sobic004G051700 Sobic004G051700 Sobic003G305700--Sobic004G051700 Sobic003G305700--Sobic009G232100 Sobic009G088900 Sobic009G088900 Sobic003G305700--Sobic009G088900 Sobic003G305700--Sobic001G310300 Sobic007G218800 Sobic007G218800 Sobic003G305700--Sobic007G218800 Sobic003G305700--Sobic001G328800 Sobic001G444800 Sobic001G444800 Sobic003G305700--Sobic001G444800 Sobic004G297900 Sobic004G297900 Sobic002G092600--Sobic004G297900 Sobic006G235200 Sobic006G235200 Sobic002G092600--Sobic006G235200 Sobic008G009400 Sobic008G009400 Sobic002G092600--Sobic008G009400 Sobic003G299300 Sobic003G299300 Sobic002G092600--Sobic003G299300 Sobic001G300500 Sobic001G300500 Sobic002G092600--Sobic001G300500 Sobic004G295100 Sobic004G295100 Sobic002G092600--Sobic004G295100 Sobic009G109000 Sobic009G109000 Sobic002G092600--Sobic009G109000 Sobic002G092600--Sobic010G085800 SobicK026900 SobicK026900 Sobic002G092600--SobicK026900 Sobic001G295800 Sobic001G295800 Sobic004G266200--Sobic001G295800 Sobic001G304300 Sobic001G304300 Sobic004G266200--Sobic001G304300 Sobic006G211200 Sobic006G211200 Sobic004G266200--Sobic006G211200 Sobic001G016500 Sobic001G016500 Sobic004G266200--Sobic001G016500 Sobic004G266200--Sobic002G218300 Sobic009G248100 Sobic009G248100 Sobic004G266200--Sobic009G248100 Sobic002G320800 Sobic002G320800 Sobic004G266200--Sobic002G320800 Sobic004G266200--Sobic001G481000 Sobic010G211600 Sobic010G211600 Sobic004G266200--Sobic010G211600
Octagon: transcription factors


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