Gene annotation
Transcriptome id Sobic.004G226200.1
Synonym Sb04g027060
Functional annotation expressed protein
UniProt C5XY82
Pfam -
Panther DB PTHR34538 PTHR34538:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g42470.1 : expressed protein
MaizeGDB (Corn) Zm00025a051368 , Zm00025a022015
Brachypodium KQK16803 , KQJ93692 , KQK00480
Barley HORVU7Hr1G038860.1 , HORVU7Hr1G038860.2 , HORVU7Hr1G038860.3 , HORVU7Hr1G038860.4 , HORVU6Hr1G076130.1 , HORVU6Hr1G076130.3 , HORVU6Hr1G076130.2 , HORVU6Hr1G076130.5 , HORVU6Hr1G076130.4
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G254300 expressed protein -
2 Sobic.002G247800 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL17 - SBP-box gene family member, expressed -
3 Sobic.003G174700 expressed protein -
4 Sobic.004G266200 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
5 Sobic.001G505100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
6 Sobic.010G095600 RING-H2 finger protein, putative, expressed -
7 Sobic.004G268800 nodulin, putative, expressed -
8 Sobic.001G389400 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed K17278: membrane-associated progesterone receptor component
9 Sobic.010G221300 expressed protein -
10 Sobic.001G313200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
11 Sobic.001G004800 receptor protein kinase, putative, expressed -
12 Sobic.004G203700 ubiquitin family protein, putative, expressed -
13 Sobic.004G252100 ribosomal protein L7Ae, putative, expressed K11129: NHP2, H/ACA ribonucleoprotein complex subunit 2
14 Sobic.004G345500 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
15 Sobic.006G191800 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
16 Sobic.003G321200 pectinesterase, putative, expressed K01051: pectinesterase
17 Sobic.004G028400 SWIB/MDM2 domain containing protein, expressed -
18 Sobic.009G069700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@Transcriptional repressor(PubMedID : 30367619)@OsIAA16 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
19 Sobic.002G353800 homeobox domain containing protein, expressed K09338: homeobox-leucine zipper protein
20 Sobic.002G218300 expressed protein -


Gene co-expression network
sample Sobic004G226200 Sobic004G226200 Sobic002G254300 Sobic002G254300 Sobic004G226200--Sobic002G254300 Sobic002G247800 Sobic002G247800 Sobic004G226200--Sobic002G247800 Sobic003G174700 Sobic003G174700 Sobic004G226200--Sobic003G174700 Sobic004G266200 Sobic004G266200 Sobic004G226200--Sobic004G266200 Sobic001G505100 Sobic001G505100 Sobic004G226200--Sobic001G505100 Sobic010G095600 Sobic010G095600 Sobic004G226200--Sobic010G095600 Sobic004G268800 Sobic004G268800 Sobic004G226200--Sobic004G268800 Sobic001G389400 Sobic001G389400 Sobic004G226200--Sobic001G389400 Sobic010G221300 Sobic010G221300 Sobic004G226200--Sobic010G221300 Sobic002G254300--Sobic002G247800 Sobic007G213400 Sobic007G213400 Sobic002G254300--Sobic007G213400 Sobic002G179150 Sobic002G179150 Sobic002G254300--Sobic002G179150 Sobic002G254300--Sobic003G174700 Sobic001G030400 Sobic001G030400 Sobic002G254300--Sobic001G030400 Sobic003G000700 Sobic003G000700 Sobic002G254300--Sobic003G000700 Sobic003G117500 Sobic003G117500 Sobic002G254300--Sobic003G117500 Sobic010G091600 Sobic010G091600 Sobic002G254300--Sobic010G091600 Sobic001G475500 Sobic001G475500 Sobic002G254300--Sobic001G475500 Sobic007G225400 Sobic007G225400 Sobic002G247800--Sobic007G225400 Sobic002G247800--Sobic002G179150 Sobic004G170900 Sobic004G170900 Sobic002G247800--Sobic004G170900 Sobic001G470100 Sobic001G470100 Sobic002G247800--Sobic001G470100 Sobic005G142500 Sobic005G142500 Sobic002G247800--Sobic005G142500 Sobic004G285900 Sobic004G285900 Sobic002G247800--Sobic004G285900 Sobic002G247800--Sobic001G030400 Sobic010G159100 Sobic010G159100 Sobic002G247800--Sobic010G159100 Sobic003G011100 Sobic003G011100 Sobic002G247800--Sobic003G011100 Sobic004G217450 Sobic004G217450 Sobic003G174700--Sobic004G217450 Sobic003G034600 Sobic003G034600 Sobic003G174700--Sobic003G034600 Sobic006G137800 Sobic006G137800 Sobic003G174700--Sobic006G137800 Sobic006G260300 Sobic006G260300 Sobic003G174700--Sobic006G260300 Sobic006G191800 Sobic006G191800 Sobic003G174700--Sobic006G191800 Sobic003G174700--Sobic010G221300 Sobic003G160700 Sobic003G160700 Sobic003G174700--Sobic003G160700 Sobic001G529400 Sobic001G529400 Sobic003G174700--Sobic001G529400 Sobic001G439100 Sobic001G439100 Sobic003G174700--Sobic001G439100 Sobic001G295800 Sobic001G295800 Sobic004G266200--Sobic001G295800 Sobic001G304300 Sobic001G304300 Sobic004G266200--Sobic001G304300 Sobic006G211200 Sobic006G211200 Sobic004G266200--Sobic006G211200 Sobic001G016500 Sobic001G016500 Sobic004G266200--Sobic001G016500 Sobic002G218300 Sobic002G218300 Sobic004G266200--Sobic002G218300 Sobic009G248100 Sobic009G248100 Sobic004G266200--Sobic009G248100 Sobic002G320800 Sobic002G320800 Sobic004G266200--Sobic002G320800 Sobic001G481000 Sobic001G481000 Sobic004G266200--Sobic001G481000 Sobic010G211600 Sobic010G211600 Sobic004G266200--Sobic010G211600 Sobic004G345500 Sobic004G345500 Sobic001G505100--Sobic004G345500 Sobic004G152400 Sobic004G152400 Sobic001G505100--Sobic004G152400 Sobic004G103800 Sobic004G103800 Sobic001G505100--Sobic004G103800 Sobic007G019000 Sobic007G019000 Sobic001G505100--Sobic007G019000 Sobic010G230700 Sobic010G230700 Sobic001G505100--Sobic010G230700 Sobic007G018300 Sobic007G018300 Sobic001G505100--Sobic007G018300 Sobic002G330000 Sobic002G330000 Sobic001G505100--Sobic002G330000 Sobic003G344600 Sobic003G344600 Sobic001G505100--Sobic003G344600 Sobic002G115000 Sobic002G115000 Sobic001G505100--Sobic002G115000 Sobic003G357300 Sobic003G357300 Sobic010G095600--Sobic003G357300 Sobic001G162000 Sobic001G162000 Sobic010G095600--Sobic001G162000 Sobic004G271400 Sobic004G271400 Sobic010G095600--Sobic004G271400 Sobic010G095600--Sobic001G389400 Sobic010G095600--Sobic003G344600 Sobic010G095600--Sobic007G018300 Sobic003G322400 Sobic003G322400 Sobic010G095600--Sobic003G322400 Sobic010G257100 Sobic010G257100 Sobic010G095600--Sobic010G257100 Sobic009G050300 Sobic009G050300 Sobic010G095600--Sobic009G050300 Sobic001G412500 Sobic001G412500 Sobic004G268800--Sobic001G412500 Sobic001G107200 Sobic001G107200 Sobic004G268800--Sobic001G107200 Sobic004G331200 Sobic004G331200 Sobic004G268800--Sobic004G331200 Sobic004G268800--Sobic002G247800 Sobic001G517600 Sobic001G517600 Sobic004G268800--Sobic001G517600 Sobic004G047500 Sobic004G047500 Sobic004G268800--Sobic004G047500 Sobic002G162300 Sobic002G162300 Sobic004G268800--Sobic002G162300 Sobic001G528600 Sobic001G528600 Sobic004G268800--Sobic001G528600 Sobic004G268800--Sobic003G011100 Sobic003G249800 Sobic003G249800 Sobic001G389400--Sobic003G249800 Sobic002G068300 Sobic002G068300 Sobic001G389400--Sobic002G068300 Sobic007G190800 Sobic007G190800 Sobic001G389400--Sobic007G190800 Sobic002G022400 Sobic002G022400 Sobic001G389400--Sobic002G022400 Sobic001G389400--Sobic010G257100 Sobic004G152700 Sobic004G152700 Sobic001G389400--Sobic004G152700 Sobic003G321700 Sobic003G321700 Sobic001G389400--Sobic003G321700 Sobic003G429000 Sobic003G429000 Sobic001G389400--Sobic003G429000 Sobic001G389400--Sobic010G230700 Sobic010G221300--Sobic006G191800 Sobic004G041900 Sobic004G041900 Sobic010G221300--Sobic004G041900 Sobic001G031700 Sobic001G031700 Sobic010G221300--Sobic001G031700 Sobic010G047100 Sobic010G047100 Sobic010G221300--Sobic010G047100 Sobic010G221300--Sobic003G160700 Sobic003G125650 Sobic003G125650 Sobic010G221300--Sobic003G125650 Sobic004G203700 Sobic004G203700 Sobic010G221300--Sobic004G203700 Sobic009G184000 Sobic009G184000 Sobic010G221300--Sobic009G184000 Sobic002G387900 Sobic002G387900 Sobic010G221300--Sobic002G387900
Octagon: transcription factors


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