Gene annotation
Transcriptome id Sobic.009G049900.4
Synonym Sb09g004250
Functional annotation peptide transporter PTR2, putative, expressed
UniProt C5Z0I9
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF112
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT5G13400 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os01g01360.1 : peptide transporter PTR2, putative, expressed
MaizeGDB (Corn) Zm00025a035605 , Zm00025a023849
Brachypodium KQK11069 , PNT77238
Barley HORVU4Hr1G064820.2 , HORVU4Hr1G064820.3 , HORVU4Hr1G064820.1 , HORVU4Hr1G088890.1 , HORVU4Hr1G088890.2 , HORVU3Hr1G014510.2 , HORVU3Hr1G014510.3 , HORVU3Hr1G014510.1
Wheat TraesCS3A02G081100 , TraesCS3A02G081100 , TraesCS3A02G081100 , TraesCS4B02G231800 , TraesCS4D02G233100 , TraesCS4A02G076000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G024550 - -
2 Sobic.005G002500 beta,beta-carotene 9,10-dioxygenase, putative, expressed K17913: carlactone synthase / all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase
3 Sobic.004G011201 - K10143: RFWD2, E3 ubiquitin-protein ligase RFWD2
4 Sobic.001G009200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
5 Sobic.002G359200 helix-loop-helix DNA-binding domain containing protein, expressed -
6 Sobic.010G244000 expressed protein -
7 Sobic.006G260101 - -
8 Sobic.005G169800 GTPase of unknown function domain containing protein, putative, expressed K03665: GTPase
9 Sobic.006G280900 zinc finger, C3HC4 type domain containing protein, expressed -
10 Sobic.004G032500 membrane associated DUF588 domain containing protein, putative, expressed -
11 Sobic.008G192800 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
12 Sobic.010G041500 dual specificity protein phosphatase, putative, expressed -
13 Sobic.006G065200 SAM domain family protein, expressed -
14 Sobic.004G302400 NAC domain containing protein, putative, expressed -
15 Sobic.009G039300 short-chain dehydrogenase/reductase, putative, expressed -
16 Sobic.009G174600 OsFBX407 - F-box domain containing protein, expressed -
17 Sobic.009G083100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.006G222650 - -
19 Sobic.007G119300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endoglucanase, putative, expressed -
20 Sobic.004G177400 T-complex protein 11, putative, expressed -


Gene co-expression network
sample Sobic009G049900 Sobic009G049900 Sobic008G024550 Sobic008G024550 Sobic009G049900--Sobic008G024550 Sobic005G002500 Sobic005G002500 Sobic009G049900--Sobic005G002500 Sobic004G011201 Sobic004G011201 Sobic009G049900--Sobic004G011201 Sobic001G009200 Sobic001G009200 Sobic009G049900--Sobic001G009200 Sobic002G359200 Sobic002G359200 Sobic009G049900--Sobic002G359200 Sobic010G244000 Sobic010G244000 Sobic009G049900--Sobic010G244000 Sobic006G260101 Sobic006G260101 Sobic009G049900--Sobic006G260101 Sobic005G169800 Sobic005G169800 Sobic009G049900--Sobic005G169800 Sobic006G280900 Sobic006G280900 Sobic009G049900--Sobic006G280900 Sobic008G024550--Sobic010G244000 Sobic001G520200 Sobic001G520200 Sobic008G024550--Sobic001G520200 Sobic001G163000 Sobic001G163000 Sobic008G024550--Sobic001G163000 Sobic001G344450 Sobic001G344450 Sobic008G024550--Sobic001G344450 Sobic009G038800 Sobic009G038800 Sobic008G024550--Sobic009G038800 Sobic009G039300 Sobic009G039300 Sobic008G024550--Sobic009G039300 Sobic008G024550--Sobic005G002500 Sobic009G215350 Sobic009G215350 Sobic008G024550--Sobic009G215350 Sobic002G038200 Sobic002G038200 Sobic008G024550--Sobic002G038200 Sobic005G002500--Sobic009G039300 Sobic001G537600 Sobic001G537600 Sobic005G002500--Sobic001G537600 Sobic005G002500--Sobic006G280900 Sobic006G146400 Sobic006G146400 Sobic005G002500--Sobic006G146400 Sobic009G238200 Sobic009G238200 Sobic005G002500--Sobic009G238200 Sobic006G065200 Sobic006G065200 Sobic005G002500--Sobic006G065200 Sobic010G106400 Sobic010G106400 Sobic005G002500--Sobic010G106400 Sobic005G002500--Sobic001G344450 Sobic004G302400 Sobic004G302400 Sobic005G002500--Sobic004G302400 Sobic001G128900 Sobic001G128900 Sobic004G011201--Sobic001G128900 Sobic010G158766 Sobic010G158766 Sobic004G011201--Sobic010G158766 Sobic001G220200 Sobic001G220200 Sobic004G011201--Sobic001G220200 Sobic001G410800 Sobic001G410800 Sobic004G011201--Sobic001G410800 Sobic004G011201--Sobic009G238200 Sobic009G174600 Sobic009G174600 Sobic004G011201--Sobic009G174600 Sobic004G011201--Sobic001G009200 Sobic001G535601 Sobic001G535601 Sobic004G011201--Sobic001G535601 Sobic004G344301 Sobic004G344301 Sobic004G011201--Sobic004G344301 Sobic001G543600 Sobic001G543600 Sobic001G009200--Sobic001G543600 Sobic001G009200--Sobic004G011201 Sobic001G009200--Sobic009G174600 Sobic006G103601 Sobic006G103601 Sobic001G009200--Sobic006G103601 Sobic001G009200--Sobic006G065200 Sobic007G119300 Sobic007G119300 Sobic001G009200--Sobic007G119300 Sobic001G009200--Sobic006G280900 Sobic001G009200--Sobic004G302400 Sobic007G165200 Sobic007G165200 Sobic001G009200--Sobic007G165200 Sobic003G406240 Sobic003G406240 Sobic002G359200--Sobic003G406240 Sobic001G523300 Sobic001G523300 Sobic002G359200--Sobic001G523300 Sobic004G205400 Sobic004G205400 Sobic002G359200--Sobic004G205400 Sobic002G359200--Sobic004G011201 Sobic002G396900 Sobic002G396900 Sobic002G359200--Sobic002G396900 Sobic002G359200--Sobic005G002500 Sobic001G308450 Sobic001G308450 Sobic002G359200--Sobic001G308450 Sobic002G359200--Sobic001G537600 Sobic006G037000 Sobic006G037000 Sobic002G359200--Sobic006G037000 Sobic008G173700 Sobic008G173700 Sobic010G244000--Sobic008G173700 Sobic004G177400 Sobic004G177400 Sobic010G244000--Sobic004G177400 Sobic010G244000--Sobic008G024550 Sobic008G064900 Sobic008G064900 Sobic010G244000--Sobic008G064900 Sobic003G378500 Sobic003G378500 Sobic010G244000--Sobic003G378500 Sobic004G032500 Sobic004G032500 Sobic010G244000--Sobic004G032500 Sobic010G244000--Sobic001G520200 Sobic004G302550 Sobic004G302550 Sobic010G244000--Sobic004G302550 Sobic006G222650 Sobic006G222650 Sobic010G244000--Sobic006G222650 Sobic010G278400 Sobic010G278400 Sobic006G260101--Sobic010G278400 Sobic006G260101--Sobic004G205400 Sobic005G145700 Sobic005G145700 Sobic006G260101--Sobic005G145700 Sobic004G162600 Sobic004G162600 Sobic006G260101--Sobic004G162600 Sobic009G106300 Sobic009G106300 Sobic006G260101--Sobic009G106300 Sobic009G187900 Sobic009G187900 Sobic006G260101--Sobic009G187900 Sobic003G017300 Sobic003G017300 Sobic006G260101--Sobic003G017300 Sobic001G087500 Sobic001G087500 Sobic006G260101--Sobic001G087500 Sobic006G260101--Sobic002G359200 Sobic005G169800--Sobic006G280900 Sobic001G204200 Sobic001G204200 Sobic005G169800--Sobic001G204200 Sobic005G169800--Sobic006G146400 Sobic005G169800--Sobic006G222650 Sobic009G236000 Sobic009G236000 Sobic005G169800--Sobic009G236000 Sobic009G083100 Sobic009G083100 Sobic005G169800--Sobic009G083100 Sobic005G169800--Sobic004G302400 Sobic005G169800--Sobic007G119300 Sobic009G082500 Sobic009G082500 Sobic005G169800--Sobic009G082500 Sobic006G280900--Sobic006G146400 Sobic006G280900--Sobic006G222650 Sobic006G280900--Sobic004G302400 Sobic006G280900--Sobic001G537600 Sobic006G280900--Sobic009G083100 Sobic006G280900--Sobic009G238200 Sobic002G116300 Sobic002G116300 Sobic006G280900--Sobic002G116300 Sobic006G280900--Sobic010G106400 Sobic010G035300 Sobic010G035300 Sobic006G280900--Sobic010G035300
Octagon: transcription factors


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