Gene annotation
Transcriptome id Sobic.009G052200.1
Synonym Sb09g004430, LPD1, ptlpd1
Functional annotation dihydrolipoyl dehydrogenase, putative, expressed
UniProt C5Z0L0
Pfam PF01134 PF00070 PF02852
Panther DB PTHR22912 PTHR22912:SF165
NCBI CDD -
KEGG Orthology K00382; DLD, lpd, dihydrolipoamide dehydrogenase
Gene Ontology GO:0008033; tRNA processing GO:0016491oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT3G16950 : lipoamide dehydrogenase 1
RAP-DB (Rice) LOC_Os05g06460.1 : dihydrolipoyl dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a036195 , Zm00025a036829
Brachypodium KQK07384 , KQK07383 , KQK04233 , PNT71752 , PNT71751
Barley HORVU1Hr1G023060.8 , HORVU1Hr1G023060.2 , HORVU1Hr1G023060.3 , HORVU1Hr1G023060.1 , HORVU1Hr1G023060.6 , HORVU1Hr1G023060.4 , HORVU1Hr1G023060.5 , HORVU1Hr1G023060.7
Wheat TraesCS1B02G124900 , TraesCS1B02G124900 , TraesCS1B02G124900 , TraesCS1D02G107400 , TraesCS1D02G107400 , TraesCS1D02G107400 , TraesCS1D02G107400 , TraesCS1A02G099500 , TraesCS1A02G099500 , TraesCS1A02G099500
Populus -


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cDNA sequences
Sobic.009G052200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G043700 3-oxoacyl-reductase, chloroplast precursor, putative, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
2 Sobic.002G230900 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
3 Sobic.004G330600 GHMP kinases ATP-binding protein, putative, expressed K01597: MVD, diphosphomevalonate decarboxylase
4 Sobic.001G508200 multidrug resistance-associated protein, putative, expressed -
5 Sobic.003G427200 uridine 5-monophosphate synthase, putative, expressed K13421: uridine monophosphate synthetase
K12486: stromal membrane-associated protein
6 Sobic.001G261400 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
7 Sobic.001G397000 argininosuccinate lyase, putative, expressed K01755: argH, argininosuccinate lyase
8 Sobic.006G013300 receptor-like protein kinase 2 precursor, putative, expressed -
9 Sobic.008G090000 oxysterol-binding protein, putative, expressed -
10 Sobic.004G082700 PPR repeat containing protein, expressed -
11 Sobic.001G483800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tubulin--tyrosine ligase-like protein 12, putative, expressed K16609: tubulin--tyrosine ligase-like protein 12
12 Sobic.009G208600 POEI52 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
13 Sobic.002G218600 Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed -
14 Sobic.005G105600 stripe rust resistance protein Yr10, putative, expressed K13457: RPM1, disease resistance protein RPM1
15 Sobic.001G460100 heparanase-like protein precursor, putative, expressed K07964: heparanase
16 Sobic.001G327300 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed -
17 Sobic.006G124200 expressed protein -
18 Sobic.007G053100 amino acid permease family protein, putative, expressed -
19 Sobic.009G045300 OsFBL21 - F-box domain and LRR containing protein, expressed K14485: transport inhibitor response 1
20 Sobic.009G010300 pumilio-family RNA binding protein, putative, expressed K17943: pumilio RNA-binding family


Gene co-expression network
sample Sobic009G052200 Sobic009G052200 Sobic006G043700 Sobic006G043700 Sobic009G052200--Sobic006G043700 Sobic002G230900 Sobic002G230900 Sobic009G052200--Sobic002G230900 Sobic004G330600 Sobic004G330600 Sobic009G052200--Sobic004G330600 Sobic001G508200 Sobic001G508200 Sobic009G052200--Sobic001G508200 Sobic003G427200 Sobic003G427200 Sobic009G052200--Sobic003G427200 Sobic001G261400 Sobic001G261400 Sobic009G052200--Sobic001G261400 Sobic001G397000 Sobic001G397000 Sobic009G052200--Sobic001G397000 Sobic006G013300 Sobic006G013300 Sobic009G052200--Sobic006G013300 Sobic008G090000 Sobic008G090000 Sobic009G052200--Sobic008G090000 Sobic006G043700--Sobic009G052200 Sobic002G144275 Sobic002G144275 Sobic006G043700--Sobic002G144275 Sobic006G213400 Sobic006G213400 Sobic006G043700--Sobic006G213400 Sobic004G326600 Sobic004G326600 Sobic006G043700--Sobic004G326600 Sobic004G047200 Sobic004G047200 Sobic006G043700--Sobic004G047200 Sobic005G163700 Sobic005G163700 Sobic006G043700--Sobic005G163700 Sobic003G165101 Sobic003G165101 Sobic006G043700--Sobic003G165101 Sobic010G169700 Sobic010G169700 Sobic006G043700--Sobic010G169700 Sobic007G092200 Sobic007G092200 Sobic006G043700--Sobic007G092200 Sobic002G230900--Sobic001G261400 Sobic002G218600 Sobic002G218600 Sobic002G230900--Sobic002G218600 Sobic004G311600 Sobic004G311600 Sobic002G230900--Sobic004G311600 Sobic007G218100 Sobic007G218100 Sobic002G230900--Sobic007G218100 Sobic001G304800 Sobic001G304800 Sobic002G230900--Sobic001G304800 Sobic004G263700 Sobic004G263700 Sobic002G230900--Sobic004G263700 Sobic002G230900--Sobic006G013300 Sobic006G073800 Sobic006G073800 Sobic002G230900--Sobic006G073800 Sobic006G124200 Sobic006G124200 Sobic002G230900--Sobic006G124200 Sobic007G043400 Sobic007G043400 Sobic004G330600--Sobic007G043400 Sobic004G330600--Sobic008G090000 Sobic006G275500 Sobic006G275500 Sobic004G330600--Sobic006G275500 Sobic006G094100 Sobic006G094100 Sobic004G330600--Sobic006G094100 Sobic009G188900 Sobic009G188900 Sobic004G330600--Sobic009G188900 Sobic001G290500 Sobic001G290500 Sobic004G330600--Sobic001G290500 Sobic009G045300 Sobic009G045300 Sobic004G330600--Sobic009G045300 Sobic002G133000 Sobic002G133000 Sobic004G330600--Sobic002G133000 Sobic006G281900 Sobic006G281900 Sobic004G330600--Sobic006G281900 Sobic001G508200--Sobic006G013300 Sobic004G347500 Sobic004G347500 Sobic001G508200--Sobic004G347500 Sobic009G208600 Sobic009G208600 Sobic001G508200--Sobic009G208600 Sobic005G021000 Sobic005G021000 Sobic001G508200--Sobic005G021000 Sobic006G208000 Sobic006G208000 Sobic001G508200--Sobic006G208000 Sobic002G266300 Sobic002G266300 Sobic001G508200--Sobic002G266300 Sobic010G024600 Sobic010G024600 Sobic001G508200--Sobic010G024600 Sobic003G098300 Sobic003G098300 Sobic001G508200--Sobic003G098300 Sobic003G427300 Sobic003G427300 Sobic001G508200--Sobic003G427300 Sobic004G291200 Sobic004G291200 Sobic003G427200--Sobic004G291200 Sobic003G427200--Sobic002G266300 Sobic003G427200--Sobic010G024600 Sobic004G033200 Sobic004G033200 Sobic003G427200--Sobic004G033200 Sobic009G241900 Sobic009G241900 Sobic003G427200--Sobic009G241900 Sobic010G211200 Sobic010G211200 Sobic003G427200--Sobic010G211200 Sobic003G427200--Sobic001G508200 Sobic007G053100 Sobic007G053100 Sobic003G427200--Sobic007G053100 Sobic004G123200 Sobic004G123200 Sobic003G427200--Sobic004G123200 Sobic010G134900 Sobic010G134900 Sobic001G261400--Sobic010G134900 Sobic004G214300 Sobic004G214300 Sobic001G261400--Sobic004G214300 Sobic009G102400 Sobic009G102400 Sobic001G261400--Sobic009G102400 Sobic001G261400--Sobic004G263700 Sobic001G261400--Sobic002G230900 Sobic001G261400--Sobic006G124200 Sobic001G261400--Sobic002G218600 Sobic010G177300 Sobic010G177300 Sobic001G261400--Sobic010G177300 Sobic010G155100 Sobic010G155100 Sobic001G261400--Sobic010G155100 Sobic001G371100 Sobic001G371100 Sobic001G397000--Sobic001G371100 Sobic003G300900 Sobic003G300900 Sobic001G397000--Sobic003G300900 Sobic003G396600 Sobic003G396600 Sobic001G397000--Sobic003G396600 Sobic007G134800 Sobic007G134800 Sobic001G397000--Sobic007G134800 Sobic010G144900 Sobic010G144900 Sobic001G397000--Sobic010G144900 Sobic008G100700 Sobic008G100700 Sobic001G397000--Sobic008G100700 Sobic001G081900 Sobic001G081900 Sobic001G397000--Sobic001G081900 Sobic002G101000 Sobic002G101000 Sobic001G397000--Sobic002G101000 Sobic001G228200 Sobic001G228200 Sobic001G397000--Sobic001G228200 Sobic006G013300--Sobic009G208600 Sobic005G105600 Sobic005G105600 Sobic006G013300--Sobic005G105600 Sobic002G232900 Sobic002G232900 Sobic006G013300--Sobic002G232900 Sobic004G029900 Sobic004G029900 Sobic006G013300--Sobic004G029900 Sobic006G013300--Sobic001G508200 Sobic003G419500 Sobic003G419500 Sobic006G013300--Sobic003G419500 Sobic006G013300--Sobic005G021000 Sobic006G013300--Sobic004G347500 Sobic002G240000 Sobic002G240000 Sobic006G013300--Sobic002G240000 Sobic008G090000--Sobic006G275500 Sobic003G147500 Sobic003G147500 Sobic008G090000--Sobic003G147500 Sobic006G084300 Sobic006G084300 Sobic008G090000--Sobic006G084300 Sobic006G016700 Sobic006G016700 Sobic008G090000--Sobic006G016700 Sobic008G083500 Sobic008G083500 Sobic008G090000--Sobic008G083500 Sobic009G146250 Sobic009G146250 Sobic008G090000--Sobic009G146250 Sobic002G168000 Sobic002G168000 Sobic008G090000--Sobic002G168000 Sobic008G090000--Sobic009G188900 Sobic002G362200 Sobic002G362200 Sobic008G090000--Sobic002G362200
Octagon: transcription factors


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