Gene annotation
Transcriptome id Sobic.009G126800.1
Synonym Sb09g019420
Functional annotation exonuclease, putative, expressed
UniProt C5YXJ6
Pfam PF00929
Panther DB PTHR23044 PTHR23044:SF34
NCBI CDD KOG0542; Predicted exonuclease
KEGG Orthology K18417; ERI1 exoribonuclease 2
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G15140 : Polynucleotidyl transferase, ribonuclease H-like superfamily protein
RAP-DB (Rice) LOC_Os01g43080.1 : exonuclease, putative, expressed
MaizeGDB (Corn) -
Brachypodium PNT75197
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G253600 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
2 Sobic.002G362300 prefoldin, putative, expressed -
3 Sobic.002G408600 expressed protein -
4 Sobic.008G165100 G-patch domain containing protein, putative, expressed K13103: tuftelin-interacting protein 11
5 Sobic.003G433500 Putative splicing factor(PubMedID : 24356560)@serine/arginine repetitive matrix protein 1, putative, expressed K14325: RNA-binding protein with serine-rich domain 1
6 Sobic.005G009200 expressed protein -
7 Sobic.010G202600 zinc finger, C3HC4 type domain containing protein, expressed K10661: MARCH6, E3 ubiquitin-protein ligase MARCH6
8 Sobic.001G230500 RNA recognition motif containing protein, putative, expressed K12831: SF3B4, splicing factor 3B subunit 4
9 Sobic.010G235800 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
10 Sobic.005G072400 expressed protein -
11 Sobic.003G184400 jmjC domain-containing protein 4, putative, expressed -
12 Sobic.009G074700 heat shock protein binding protein, putative, expressed K09540: SEC63, translocation protein SEC63
13 Sobic.002G050600 mla1, putative, expressed -
14 Sobic.005G046900 expressed protein K08331: autophagy-related protein 13
15 Sobic.002G095700 C2-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C2 subfamily conserved sequence, expressed K10523: speckle-type POZ protein
16 Sobic.002G067800 - -
17 Sobic.001G294100 ICE-like protease p20 domain containing protein, expressed -
18 Sobic.009G022100 Putative splicing factor(PubMedID : 24356560)@splicing factor, arginine/serine-rich 7, putative, expressed K12896: splicing factor, arginine/serine-rich 7
19 Sobic.002G018600 OsFBX234 - F-box domain containing protein, expressed -
20 Sobic.002G159200 WD domain, G-beta repeat domain containing protein, expressed K17985: activating molecule in BECN1-regulated autophagy protein 1


Gene co-expression network
sample Sobic009G126800 Sobic009G126800 Sobic002G253600 Sobic002G253600 Sobic009G126800--Sobic002G253600 Sobic002G362300 Sobic002G362300 Sobic009G126800--Sobic002G362300 Sobic002G408600 Sobic002G408600 Sobic009G126800--Sobic002G408600 Sobic008G165100 Sobic008G165100 Sobic009G126800--Sobic008G165100 Sobic003G433500 Sobic003G433500 Sobic009G126800--Sobic003G433500 Sobic005G009200 Sobic005G009200 Sobic009G126800--Sobic005G009200 Sobic010G202600 Sobic010G202600 Sobic009G126800--Sobic010G202600 Sobic001G230500 Sobic001G230500 Sobic009G126800--Sobic001G230500 Sobic010G235800 Sobic010G235800 Sobic009G126800--Sobic010G235800 Sobic005G072400 Sobic005G072400 Sobic002G253600--Sobic005G072400 Sobic002G016900 Sobic002G016900 Sobic002G253600--Sobic002G016900 Sobic003G244700 Sobic003G244700 Sobic002G253600--Sobic003G244700 Sobic002G253600--Sobic009G126800 Sobic006G203200 Sobic006G203200 Sobic002G253600--Sobic006G203200 Sobic008G156200 Sobic008G156200 Sobic002G253600--Sobic008G156200 Sobic006G278200 Sobic006G278200 Sobic002G253600--Sobic006G278200 Sobic003G022200 Sobic003G022200 Sobic002G253600--Sobic003G022200 Sobic003G415100 Sobic003G415100 Sobic002G253600--Sobic003G415100 Sobic002G362300--Sobic005G009200 Sobic001G371000 Sobic001G371000 Sobic002G362300--Sobic001G371000 Sobic002G362300--Sobic003G433500 Sobic005G229000 Sobic005G229000 Sobic002G362300--Sobic005G229000 Sobic008G073000 Sobic008G073000 Sobic002G362300--Sobic008G073000 Sobic009G030300 Sobic009G030300 Sobic002G362300--Sobic009G030300 Sobic002G095700 Sobic002G095700 Sobic002G362300--Sobic002G095700 Sobic005G030300 Sobic005G030300 Sobic002G362300--Sobic005G030300 Sobic009G044900 Sobic009G044900 Sobic002G362300--Sobic009G044900 Sobic010G278600 Sobic010G278600 Sobic002G408600--Sobic010G278600 Sobic009G074700 Sobic009G074700 Sobic002G408600--Sobic009G074700 Sobic001G334100 Sobic001G334100 Sobic002G408600--Sobic001G334100 Sobic005G199200 Sobic005G199200 Sobic002G408600--Sobic005G199200 Sobic002G408600--Sobic009G126800 Sobic002G262700 Sobic002G262700 Sobic002G408600--Sobic002G262700 Sobic001G335500 Sobic001G335500 Sobic002G408600--Sobic001G335500 Sobic003G184400 Sobic003G184400 Sobic002G408600--Sobic003G184400 Sobic004G067400 Sobic004G067400 Sobic002G408600--Sobic004G067400 Sobic002G067800 Sobic002G067800 Sobic008G165100--Sobic002G067800 Sobic010G194700 Sobic010G194700 Sobic008G165100--Sobic010G194700 Sobic008G165100--Sobic008G073000 Sobic008G165100--Sobic005G030300 Sobic008G165100--Sobic002G095700 Sobic006G123900 Sobic006G123900 Sobic008G165100--Sobic006G123900 Sobic002G151600 Sobic002G151600 Sobic008G165100--Sobic002G151600 Sobic008G165100--Sobic003G433500 Sobic002G045400 Sobic002G045400 Sobic008G165100--Sobic002G045400 Sobic009G195200 Sobic009G195200 Sobic003G433500--Sobic009G195200 Sobic003G355000 Sobic003G355000 Sobic003G433500--Sobic003G355000 Sobic003G433500--Sobic002G045400 Sobic009G216000 Sobic009G216000 Sobic003G433500--Sobic009G216000 Sobic003G354100 Sobic003G354100 Sobic003G433500--Sobic003G354100 Sobic006G267300 Sobic006G267300 Sobic003G433500--Sobic006G267300 Sobic006G248500 Sobic006G248500 Sobic003G433500--Sobic006G248500 Sobic003G433500--Sobic002G362300 Sobic002G259800 Sobic002G259800 Sobic003G433500--Sobic002G259800 Sobic005G009200--Sobic002G362300 Sobic003G442000 Sobic003G442000 Sobic005G009200--Sobic003G442000 Sobic005G009200--Sobic001G371000 Sobic008G129700 Sobic008G129700 Sobic005G009200--Sobic008G129700 Sobic008G117200 Sobic008G117200 Sobic005G009200--Sobic008G117200 Sobic009G151200 Sobic009G151200 Sobic005G009200--Sobic009G151200 Sobic005G009200--Sobic002G259800 Sobic002G421700 Sobic002G421700 Sobic005G009200--Sobic002G421700 Sobic008G034600 Sobic008G034600 Sobic005G009200--Sobic008G034600 Sobic007G111100 Sobic007G111100 Sobic010G202600--Sobic007G111100 Sobic001G469800 Sobic001G469800 Sobic010G202600--Sobic001G469800 Sobic001G131800 Sobic001G131800 Sobic010G202600--Sobic001G131800 Sobic003G185200 Sobic003G185200 Sobic010G202600--Sobic003G185200 Sobic003G205501 Sobic003G205501 Sobic010G202600--Sobic003G205501 Sobic010G202600--Sobic006G267300 Sobic009G000500 Sobic009G000500 Sobic010G202600--Sobic009G000500 Sobic008G174300 Sobic008G174300 Sobic010G202600--Sobic008G174300 Sobic003G081000 Sobic003G081000 Sobic010G202600--Sobic003G081000 Sobic001G230500--Sobic003G433500 Sobic001G168900 Sobic001G168900 Sobic001G230500--Sobic001G168900 Sobic005G046900 Sobic005G046900 Sobic001G230500--Sobic005G046900 Sobic001G230500--Sobic009G195200 Sobic006G120800 Sobic006G120800 Sobic001G230500--Sobic006G120800 Sobic001G230500--Sobic005G072400 Sobic003G427100 Sobic003G427100 Sobic001G230500--Sobic003G427100 Sobic007G187600 Sobic007G187600 Sobic001G230500--Sobic007G187600 Sobic001G038100 Sobic001G038100 Sobic001G230500--Sobic001G038100 Sobic010G279900 Sobic010G279900 Sobic010G235800--Sobic010G279900 Sobic010G235800--Sobic003G427100 Sobic010G235800--Sobic010G278600 Sobic010G235800--Sobic005G046900 Sobic010G235800--Sobic009G074700 Sobic001G246500 Sobic001G246500 Sobic010G235800--Sobic001G246500 Sobic010G235800--Sobic005G199200 Sobic005G079800 Sobic005G079800 Sobic010G235800--Sobic005G079800 Sobic008G173100 Sobic008G173100 Sobic010G235800--Sobic008G173100
Octagon: transcription factors


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