Gene annotation
Transcriptome id Sobic.009G142100.1
Synonym Sb09g020740
Functional annotation DUF538 domain containing protein, putative, expressed
UniProt C5YY66
Pfam PF04398
Panther DB PTHR31676 PTHR31676:SF30
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G02360 : Protein of unknown function, DUF538
RAP-DB (Rice) LOC_Os05g34810.1 : DUF538 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a043733
Brachypodium KQK06184
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G028800 expressed protein K19042: E3 ubiquitin-protein ligase BOI and related proteins
2 Sobic.003G413900 expressed protein -
3 Sobic.002G393600 GDSL-like lipase/acylhydrolase, putative, expressed -
4 Sobic.003G062200 transcription factor HBP-1b, putative, expressed -
5 Sobic.006G066600 DNA-binding protein S1FA, putative, expressed -
6 Sobic.006G133000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
7 Sobic.001G488000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.004G225800 GEM, putative, expressed -
9 Sobic.007G074200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@- -
10 Sobic.006G151001 - -
11 Sobic.002G240800 - -
12 Sobic.006G244500 nuclease PA3, putative, expressed -
13 Sobic.009G149800 subtilisin N-terminal Region family protein, expressed -
14 Sobic.004G067900 expressed protein -
15 Sobic.001G488200 aminotransferase, putative, expressed K00827: alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase
16 Sobic.003G316350 - -
17 Sobic.002G338250 - -
18 Sobic.001G280700 acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
19 Sobic.003G437300 sulfotransferase domain containing protein, expressed -
20 Sobic.003G024500 expressed protein -


Gene co-expression network
sample Sobic009G142100 Sobic009G142100 Sobic004G028800 Sobic004G028800 Sobic009G142100--Sobic004G028800 Sobic003G413900 Sobic003G413900 Sobic009G142100--Sobic003G413900 Sobic002G393600 Sobic002G393600 Sobic009G142100--Sobic002G393600 Sobic003G062200 Sobic003G062200 Sobic009G142100--Sobic003G062200 Sobic006G066600 Sobic006G066600 Sobic009G142100--Sobic006G066600 Sobic006G133000 Sobic006G133000 Sobic009G142100--Sobic006G133000 Sobic001G488000 Sobic001G488000 Sobic009G142100--Sobic001G488000 Sobic004G225800 Sobic004G225800 Sobic009G142100--Sobic004G225800 Sobic007G074200 Sobic007G074200 Sobic009G142100--Sobic007G074200 Sobic006G244500 Sobic006G244500 Sobic004G028800--Sobic006G244500 Sobic001G488200 Sobic001G488200 Sobic004G028800--Sobic001G488200 Sobic006G151001 Sobic006G151001 Sobic004G028800--Sobic006G151001 Sobic004G155300 Sobic004G155300 Sobic004G028800--Sobic004G155300 Sobic004G028800--Sobic003G062200 Sobic004G345100 Sobic004G345100 Sobic004G028800--Sobic004G345100 Sobic009G009800 Sobic009G009800 Sobic004G028800--Sobic009G009800 Sobic002G359900 Sobic002G359900 Sobic004G028800--Sobic002G359900 Sobic004G028800--Sobic006G066600 Sobic003G413900--Sobic009G142100 Sobic003G413900--Sobic007G074200 Sobic003G413900--Sobic002G393600 Sobic002G338250 Sobic002G338250 Sobic003G413900--Sobic002G338250 Sobic006G224200 Sobic006G224200 Sobic003G413900--Sobic006G224200 Sobic006G220900 Sobic006G220900 Sobic003G413900--Sobic006G220900 Sobic004G341100 Sobic004G341100 Sobic003G413900--Sobic004G341100 Sobic006G170400 Sobic006G170400 Sobic003G413900--Sobic006G170400 Sobic006G218300 Sobic006G218300 Sobic003G413900--Sobic006G218300 Sobic002G393600--Sobic007G074200 Sobic002G393600--Sobic002G338250 Sobic004G117600 Sobic004G117600 Sobic002G393600--Sobic004G117600 Sobic008G111500 Sobic008G111500 Sobic002G393600--Sobic008G111500 Sobic002G393600--Sobic001G488000 Sobic009G131400 Sobic009G131400 Sobic002G393600--Sobic009G131400 Sobic003G146400 Sobic003G146400 Sobic002G393600--Sobic003G146400 Sobic006G198800 Sobic006G198800 Sobic002G393600--Sobic006G198800 Sobic006G136800 Sobic006G136800 Sobic002G393600--Sobic006G136800 Sobic003G062200--Sobic006G244500 Sobic003G062200--Sobic009G009800 Sobic003G376000 Sobic003G376000 Sobic003G062200--Sobic003G376000 Sobic008G037000 Sobic008G037000 Sobic003G062200--Sobic008G037000 Sobic003G062200--Sobic006G151001 Sobic006G096200 Sobic006G096200 Sobic003G062200--Sobic006G096200 Sobic010G031600 Sobic010G031600 Sobic003G062200--Sobic010G031600 Sobic010G136300 Sobic010G136300 Sobic003G062200--Sobic010G136300 Sobic009G041100 Sobic009G041100 Sobic003G062200--Sobic009G041100 Sobic004G318400 Sobic004G318400 Sobic006G066600--Sobic004G318400 Sobic004G067900 Sobic004G067900 Sobic006G066600--Sobic004G067900 Sobic004G102900 Sobic004G102900 Sobic006G066600--Sobic004G102900 Sobic006G066600--Sobic006G244500 Sobic007G018000 Sobic007G018000 Sobic006G066600--Sobic007G018000 Sobic006G066600--Sobic004G028800 Sobic006G066600--Sobic001G488200 Sobic006G066600--Sobic004G155300 Sobic002G308400 Sobic002G308400 Sobic006G066600--Sobic002G308400 Sobic002G021132 Sobic002G021132 Sobic006G133000--Sobic002G021132 Sobic006G133000--Sobic009G041100 Sobic009G169650 Sobic009G169650 Sobic006G133000--Sobic009G169650 Sobic006G133000--Sobic006G151001 Sobic008G161601 Sobic008G161601 Sobic006G133000--Sobic008G161601 Sobic003G331700 Sobic003G331700 Sobic006G133000--Sobic003G331700 Sobic006G133000--Sobic006G096200 Sobic006G133000--Sobic008G037000 Sobic006G132300 Sobic006G132300 Sobic006G133000--Sobic006G132300 Sobic003G295000 Sobic003G295000 Sobic001G488000--Sobic003G295000 Sobic001G488000--Sobic007G074200 Sobic001G488000--Sobic002G393600 Sobic009G205100 Sobic009G205100 Sobic001G488000--Sobic009G205100 Sobic001G447100 Sobic001G447100 Sobic001G488000--Sobic001G447100 Sobic003G067700 Sobic003G067700 Sobic001G488000--Sobic003G067700 Sobic001G488000--Sobic002G338250 Sobic001G488000--Sobic008G111500 Sobic001G488000--Sobic009G131400 Sobic002G419500 Sobic002G419500 Sobic004G225800--Sobic002G419500 Sobic004G225800--Sobic001G488200 Sobic004G225800--Sobic006G244500 Sobic004G225800--Sobic003G062200 Sobic004G225800--Sobic004G067900 Sobic004G225800--Sobic002G393600 Sobic002G290500 Sobic002G290500 Sobic004G225800--Sobic002G290500 Sobic004G225800--Sobic004G028800 Sobic007G097700 Sobic007G097700 Sobic004G225800--Sobic007G097700 Sobic007G074200--Sobic008G111500 Sobic007G074200--Sobic002G393600 Sobic007G074200--Sobic002G338250 Sobic007G074200--Sobic001G447100 Sobic007G074200--Sobic004G117600 Sobic007G074200--Sobic009G131400 Sobic007G074200--Sobic003G146400 Sobic003G349700 Sobic003G349700 Sobic007G074200--Sobic003G349700 Sobic009G154200 Sobic009G154200 Sobic007G074200--Sobic009G154200
Octagon: transcription factors


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