Gene annotation
Transcriptome id Sobic.003G413900.1
Synonym Sb03g044810
Functional annotation expressed protein
UniProt C5XH18
Pfam PF05553
Panther DB PTHR33265 PTHR33265:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g70500.1 : expressed protein
MaizeGDB (Corn) Zm00025a026167
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G142100 DUF538 domain containing protein, putative, expressed -
2 Sobic.007G074200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@- -
3 Sobic.002G393600 GDSL-like lipase/acylhydrolase, putative, expressed -
4 Sobic.002G338250 - -
5 Sobic.006G224200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@translation initiation factor SUI1, putative, expressed K03113: EIF1, translation initiation factor 1
6 Sobic.006G220900 autophagy-related protein, putative, expressed K08341: GABARAP, ATG8, GABA(A) receptor-associated protein
7 Sobic.004G341100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsFBX70 - F-box domain containing protein, expressed -
8 Sobic.006G170400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.006G218300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
10 Sobic.009G154200 MYB family transcription factor, putative, expressed -
11 Sobic.006G165400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@glutamate dehydrogenase protein, putative, expressed K00261: GLUD1_2, glutamate dehydrogenase (NAD(P)+)
12 Sobic.002G090200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@cytidine deaminase, putative, expressed -
13 Sobic.009G254900 uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
14 Sobic.006G239300 thiamine-repressible mitochondrial transport protein THI74, putative, expressed K15289: solute carrier family 35, member F5
15 Sobic.003G043500 - -
16 Sobic.004G276100 expressed protein -
17 Sobic.006G096400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
18 Sobic.006G198800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@pathogenesis-related Bet v I family protein, putative, expressed -
19 Sobic.004G117600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@WRKY39, expressed -
20 Sobic.001G389900 aquaporin SIP2-1, putative, expressed K09875: aquaporin SIP


Gene co-expression network
sample Sobic003G413900 Sobic003G413900 Sobic009G142100 Sobic009G142100 Sobic003G413900--Sobic009G142100 Sobic007G074200 Sobic007G074200 Sobic003G413900--Sobic007G074200 Sobic002G393600 Sobic002G393600 Sobic003G413900--Sobic002G393600 Sobic002G338250 Sobic002G338250 Sobic003G413900--Sobic002G338250 Sobic006G224200 Sobic006G224200 Sobic003G413900--Sobic006G224200 Sobic006G220900 Sobic006G220900 Sobic003G413900--Sobic006G220900 Sobic004G341100 Sobic004G341100 Sobic003G413900--Sobic004G341100 Sobic006G170400 Sobic006G170400 Sobic003G413900--Sobic006G170400 Sobic006G218300 Sobic006G218300 Sobic003G413900--Sobic006G218300 Sobic004G028800 Sobic004G028800 Sobic009G142100--Sobic004G028800 Sobic009G142100--Sobic003G413900 Sobic009G142100--Sobic002G393600 Sobic003G062200 Sobic003G062200 Sobic009G142100--Sobic003G062200 Sobic006G066600 Sobic006G066600 Sobic009G142100--Sobic006G066600 Sobic006G133000 Sobic006G133000 Sobic009G142100--Sobic006G133000 Sobic001G488000 Sobic001G488000 Sobic009G142100--Sobic001G488000 Sobic004G225800 Sobic004G225800 Sobic009G142100--Sobic004G225800 Sobic009G142100--Sobic007G074200 Sobic008G111500 Sobic008G111500 Sobic007G074200--Sobic008G111500 Sobic007G074200--Sobic002G393600 Sobic007G074200--Sobic002G338250 Sobic001G447100 Sobic001G447100 Sobic007G074200--Sobic001G447100 Sobic004G117600 Sobic004G117600 Sobic007G074200--Sobic004G117600 Sobic009G131400 Sobic009G131400 Sobic007G074200--Sobic009G131400 Sobic003G146400 Sobic003G146400 Sobic007G074200--Sobic003G146400 Sobic003G349700 Sobic003G349700 Sobic007G074200--Sobic003G349700 Sobic009G154200 Sobic009G154200 Sobic007G074200--Sobic009G154200 Sobic002G393600--Sobic007G074200 Sobic002G393600--Sobic002G338250 Sobic002G393600--Sobic004G117600 Sobic002G393600--Sobic008G111500 Sobic002G393600--Sobic001G488000 Sobic002G393600--Sobic009G131400 Sobic002G393600--Sobic003G146400 Sobic006G198800 Sobic006G198800 Sobic002G393600--Sobic006G198800 Sobic006G136800 Sobic006G136800 Sobic002G393600--Sobic006G136800 Sobic002G338250--Sobic007G074200 Sobic002G338250--Sobic004G117600 Sobic002G338250--Sobic009G154200 Sobic002G338250--Sobic002G393600 Sobic002G338250--Sobic008G111500 Sobic001G389900 Sobic001G389900 Sobic002G338250--Sobic001G389900 Sobic002G338250--Sobic003G349700 Sobic002G338250--Sobic001G447100 Sobic002G338250--Sobic006G136800 Sobic010G069200 Sobic010G069200 Sobic006G224200--Sobic010G069200 Sobic006G121500 Sobic006G121500 Sobic006G224200--Sobic006G121500 Sobic006G214600 Sobic006G214600 Sobic006G224200--Sobic006G214600 Sobic002G139300 Sobic002G139300 Sobic006G224200--Sobic002G139300 Sobic006G240600 Sobic006G240600 Sobic006G224200--Sobic006G240600 Sobic010G211600 Sobic010G211600 Sobic006G224200--Sobic010G211600 Sobic008G158100 Sobic008G158100 Sobic006G224200--Sobic008G158100 Sobic008G027600 Sobic008G027600 Sobic006G224200--Sobic008G027600 Sobic003G322900 Sobic003G322900 Sobic006G224200--Sobic003G322900 Sobic001G058100 Sobic001G058100 Sobic006G220900--Sobic001G058100 Sobic001G289400 Sobic001G289400 Sobic006G220900--Sobic001G289400 Sobic001G026900 Sobic001G026900 Sobic006G220900--Sobic001G026900 Sobic004G276100 Sobic004G276100 Sobic006G220900--Sobic004G276100 Sobic004G335000 Sobic004G335000 Sobic006G220900--Sobic004G335000 Sobic008G179500 Sobic008G179500 Sobic006G220900--Sobic008G179500 Sobic002G083266 Sobic002G083266 Sobic006G220900--Sobic002G083266 Sobic004G301400 Sobic004G301400 Sobic006G220900--Sobic004G301400 Sobic007G096700 Sobic007G096700 Sobic006G220900--Sobic007G096700 Sobic004G026400 Sobic004G026400 Sobic004G341100--Sobic004G026400 Sobic003G150000 Sobic003G150000 Sobic004G341100--Sobic003G150000 Sobic004G340900 Sobic004G340900 Sobic004G341100--Sobic004G340900 Sobic002G196350 Sobic002G196350 Sobic004G341100--Sobic002G196350 Sobic004G351500 Sobic004G351500 Sobic004G341100--Sobic004G351500 Sobic002G040600 Sobic002G040600 Sobic004G341100--Sobic002G040600 Sobic008G097401 Sobic008G097401 Sobic004G341100--Sobic008G097401 Sobic003G264600 Sobic003G264600 Sobic004G341100--Sobic003G264600 Sobic002G378401 Sobic002G378401 Sobic004G341100--Sobic002G378401 Sobic006G170400--Sobic006G066600 Sobic002G419500 Sobic002G419500 Sobic006G170400--Sobic002G419500 Sobic002G260800 Sobic002G260800 Sobic006G170400--Sobic002G260800 Sobic001G191800 Sobic001G191800 Sobic006G170400--Sobic001G191800 Sobic004G067900 Sobic004G067900 Sobic006G170400--Sobic004G067900 Sobic001G106400 Sobic001G106400 Sobic006G170400--Sobic001G106400 Sobic002G308400 Sobic002G308400 Sobic006G170400--Sobic002G308400 Sobic006G096300 Sobic006G096300 Sobic006G170400--Sobic006G096300 Sobic002G290500 Sobic002G290500 Sobic006G170400--Sobic002G290500 Sobic002G090200 Sobic002G090200 Sobic006G218300--Sobic002G090200 Sobic001G066000 Sobic001G066000 Sobic006G218300--Sobic001G066000 Sobic006G165400 Sobic006G165400 Sobic006G218300--Sobic006G165400 Sobic009G043600 Sobic009G043600 Sobic006G218300--Sobic009G043600 Sobic004G050000 Sobic004G050000 Sobic006G218300--Sobic004G050000 Sobic006G218300--Sobic006G121500 Sobic002G367400 Sobic002G367400 Sobic006G218300--Sobic002G367400 Sobic009G254900 Sobic009G254900 Sobic006G218300--Sobic009G254900 Sobic006G199100 Sobic006G199100 Sobic006G218300--Sobic006G199100
Octagon: transcription factors


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