Gene annotation
Transcriptome id Sobic.009G148700.1
Synonym ATASE, Sb09g021310, ASE1, ATASE1
Functional annotation amidophosphoribosyltransferase, chloroplast precursor, putative, expressed
UniProt C5YYD1
Pfam PF13537
Panther DB PTHR11907 PTHR11907:SF11
NCBI CDD -
KEGG Orthology K00764; purF, amidophosphoribosyltransferase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G16570 : GLN phosphoribosyl pyrophosphate amidotransferase 1
RAP-DB (Rice) LOC_Os05g35580.1 : amidophosphoribosyltransferase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a037323 , Zm00025a043753 , Zm00025a043862 , Zm00025a041831 , Zm00025a026632
Brachypodium KQK06088 , KQK10831
Barley HORVU3Hr1G082280.1 , HORVU3Hr1G082280.2 , HORVU1Hr1G074460.2 , HORVU1Hr1G074460.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G424800 tyrosine protein kinase domain containing protein, putative, expressed -
2 Sobic.001G449700 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
3 Sobic.005G109000 cytochrome P450, putative, expressed -
4 Sobic.004G241100 NHL repeat-containing protein, putative, expressed -
5 Sobic.001G259700 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
6 Sobic.006G075500 VQ domain containing protein, putative, expressed -
7 Sobic.007G123300 C1-like domain containing protein, expressed -
8 Sobic.003G102200 helix-loop-helix DNA-binding domain containing protein, expressed -
9 Sobic.002G319500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@AAA family ATPase, putative, expressed K08900: mitochondrial chaperone BCS1
10 Sobic.002G373001 - -
11 Sobic.010G209100 WRKY28, expressed -
12 Sobic.006G178500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transmembrane amino acid transporter protein, putative, expressed -
13 Sobic.010G267600 similar to Putative senescence-associated protein(PubMedID : 29862293)@senescence-associated protein, putative, expressed -
14 Sobic.001G195100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
15 Sobic.002G202100 expressed protein -
16 Sobic.001G192600 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
17 Sobic.006G158266 - -
18 Sobic.002G328400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lc.15 - DUF26 kinases have homology to DUF26 containing loci, expressed -
19 Sobic.004G297100 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
20 Sobic.003G110200 NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3


Gene co-expression network
sample Sobic009G148700 Sobic009G148700 Sobic002G424800 Sobic002G424800 Sobic009G148700--Sobic002G424800 Sobic001G449700 Sobic001G449700 Sobic009G148700--Sobic001G449700 Sobic005G109000 Sobic005G109000 Sobic009G148700--Sobic005G109000 Sobic004G241100 Sobic004G241100 Sobic009G148700--Sobic004G241100 Sobic001G259700 Sobic001G259700 Sobic009G148700--Sobic001G259700 Sobic006G075500 Sobic006G075500 Sobic009G148700--Sobic006G075500 Sobic007G123300 Sobic007G123300 Sobic009G148700--Sobic007G123300 Sobic003G102200 Sobic003G102200 Sobic009G148700--Sobic003G102200 Sobic002G319500 Sobic002G319500 Sobic009G148700--Sobic002G319500 Sobic003G192100 Sobic003G192100 Sobic002G424800--Sobic003G192100 Sobic003G264500 Sobic003G264500 Sobic002G424800--Sobic003G264500 Sobic009G069700 Sobic009G069700 Sobic002G424800--Sobic009G069700 Sobic002G424800--Sobic005G109000 Sobic010G107100 Sobic010G107100 Sobic002G424800--Sobic010G107100 Sobic002G424800--Sobic004G241100 Sobic001G040200 Sobic001G040200 Sobic002G424800--Sobic001G040200 Sobic002G245100 Sobic002G245100 Sobic002G424800--Sobic002G245100 Sobic003G430400 Sobic003G430400 Sobic002G424800--Sobic003G430400 Sobic001G383700 Sobic001G383700 Sobic001G449700--Sobic001G383700 Sobic003G202200 Sobic003G202200 Sobic001G449700--Sobic003G202200 Sobic003G110200 Sobic003G110200 Sobic001G449700--Sobic003G110200 Sobic007G149300 Sobic007G149300 Sobic001G449700--Sobic007G149300 Sobic003G021500 Sobic003G021500 Sobic001G449700--Sobic003G021500 Sobic009G036000 Sobic009G036000 Sobic001G449700--Sobic009G036000 Sobic002G333400 Sobic002G333400 Sobic001G449700--Sobic002G333400 Sobic001G449700--Sobic001G259700 Sobic005G186100 Sobic005G186100 Sobic001G449700--Sobic005G186100 Sobic010G209100 Sobic010G209100 Sobic005G109000--Sobic010G209100 Sobic002G214800 Sobic002G214800 Sobic005G109000--Sobic002G214800 Sobic002G202100 Sobic002G202100 Sobic005G109000--Sobic002G202100 Sobic007G151100 Sobic007G151100 Sobic005G109000--Sobic007G151100 Sobic002G245800 Sobic002G245800 Sobic005G109000--Sobic002G245800 Sobic010G267600 Sobic010G267600 Sobic005G109000--Sobic010G267600 Sobic001G259600 Sobic001G259600 Sobic005G109000--Sobic001G259600 Sobic010G083600 Sobic010G083600 Sobic005G109000--Sobic010G083600 Sobic005G109000--Sobic001G449700 Sobic004G169200 Sobic004G169200 Sobic004G241100--Sobic004G169200 Sobic003G428700 Sobic003G428700 Sobic004G241100--Sobic003G428700 Sobic006G263600 Sobic006G263600 Sobic004G241100--Sobic006G263600 Sobic004G241100--Sobic009G036000 Sobic001G035100 Sobic001G035100 Sobic004G241100--Sobic001G035100 Sobic004G241100--Sobic001G259600 Sobic003G364600 Sobic003G364600 Sobic004G241100--Sobic003G364600 Sobic003G339500 Sobic003G339500 Sobic004G241100--Sobic003G339500 Sobic010G209200 Sobic010G209200 Sobic004G241100--Sobic010G209200 Sobic001G259700--Sobic006G263600 Sobic009G141500 Sobic009G141500 Sobic001G259700--Sobic009G141500 Sobic001G259700--Sobic001G259600 Sobic002G328400 Sobic002G328400 Sobic001G259700--Sobic002G328400 Sobic001G259700--Sobic004G169200 Sobic004G191400 Sobic004G191400 Sobic001G259700--Sobic004G191400 Sobic001G259700--Sobic001G449700 Sobic002G405600 Sobic002G405600 Sobic001G259700--Sobic002G405600 Sobic001G079300 Sobic001G079300 Sobic001G259700--Sobic001G079300 Sobic006G075500--Sobic010G209100 Sobic007G085300 Sobic007G085300 Sobic006G075500--Sobic007G085300 Sobic006G066200 Sobic006G066200 Sobic006G075500--Sobic006G066200 Sobic009G247900 Sobic009G247900 Sobic006G075500--Sobic009G247900 Sobic001G192600 Sobic001G192600 Sobic006G075500--Sobic001G192600 Sobic006G075500--Sobic003G430400 Sobic006G148000 Sobic006G148000 Sobic006G075500--Sobic006G148000 Sobic003G380900 Sobic003G380900 Sobic006G075500--Sobic003G380900 Sobic006G075500--Sobic004G241100 Sobic007G123300--Sobic001G449700 Sobic007G123300--Sobic003G202200 Sobic007G123300--Sobic003G364600 Sobic007G123300--Sobic003G021500 Sobic007G036900 Sobic007G036900 Sobic007G123300--Sobic007G036900 Sobic007G123300--Sobic007G149300 Sobic007G123300--Sobic002G245800 Sobic007G123300--Sobic009G247900 Sobic007G123300--Sobic001G383700 Sobic003G102200--Sobic001G449700 Sobic003G102200--Sobic003G110200 Sobic001G195100 Sobic001G195100 Sobic003G102200--Sobic001G195100 Sobic003G102200--Sobic001G259700 Sobic003G102200--Sobic001G383700 Sobic003G102200--Sobic007G149300 Sobic002G342400 Sobic002G342400 Sobic003G102200--Sobic002G342400 Sobic002G373001 Sobic002G373001 Sobic003G102200--Sobic002G373001 Sobic003G250600 Sobic003G250600 Sobic003G102200--Sobic003G250600 Sobic002G192000 Sobic002G192000 Sobic002G319500--Sobic002G192000 Sobic003G320800 Sobic003G320800 Sobic002G319500--Sobic003G320800 Sobic002G319500--Sobic001G192600 Sobic010G136000 Sobic010G136000 Sobic002G319500--Sobic010G136000 Sobic001G038900 Sobic001G038900 Sobic002G319500--Sobic001G038900 Sobic002G140400 Sobic002G140400 Sobic002G319500--Sobic002G140400 Sobic002G319500--Sobic003G430400 Sobic007G155000 Sobic007G155000 Sobic002G319500--Sobic007G155000 Sobic001G367600 Sobic001G367600 Sobic002G319500--Sobic001G367600
Octagon: transcription factors


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