Gene annotation
Transcriptome id Sobic.009G164500.4,Sobic.009G164500.2,Sobic.009G164500.1,Sobic.009G164500.3
Synonym Sb09g022650
Functional annotation clathrin adaptor complex small chain domain containing protein, expressed
UniProt A0A1B6P8V4 , A0A1B6P937 , A0A1B6P9K4 , A0A1B6P910
Pfam PF01217
Panther DB PTHR11043 PTHR11043:SF5
NCBI CDD KOG3343; Vesicle coat complex COPI, zeta subunit
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G09800 : SNARE-like superfamily protein
RAP-DB (Rice) LOC_Os05g38610.1 : clathrin adaptor complex small chain domain containing protein, expressed
MaizeGDB (Corn) Zm00025a037705 , Zm00025a043905
Brachypodium KQK05882 , KQK05883
Barley -
Wheat TraesCS1A02G286000 , TraesCS1B02G295500 , TraesCS1D02G285100
Populus -


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cDNA sequences
Sobic.009G164500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G376500 OsCML8 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
2 Sobic.003G189000 ras-related protein, putative, expressed K07874: Ras-related protein Rab-1A
3 Sobic.001G408900 OsPDIL5-1 protein disulfide isomerase PDIL5-1, expressed -
4 Sobic.001G433700 chorismate synthase 2, chloroplast precursor, putative, expressed K01736: chorismate synthase
5 Sobic.002G084500 expressed protein -
6 Sobic.002G159500 ubiquitin-conjugating enzyme, putative, expressed K10704: ubiquitin-conjugating enzyme E2 variant
7 Sobic.006G141500 expressed protein -
8 Sobic.002G296300 expressed protein -
9 Sobic.009G077400 mitochondrial carrier protein, putative, expressed K15104: SLC25A11, solute carrier family 25 (mitochondrial oxoglutarate transporter), member 11
10 Sobic.001G132100 expressed protein -
11 Sobic.010G042800 peptidase, T1 family, putative, expressed K02737: 20S proteasome subunit beta 5
12 Sobic.003G253000 ubiquitin-conjugating enzyme, putative, expressed K10580: UBE2N, BLU, ubiquitin-conjugating enzyme E2 N
13 Sobic.002G090700 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
14 Sobic.002G419100 eukaryotic translation initiation factor 2 subunit beta, putative, expressed K03238: translation initiation factor 2 subunit 2
15 Sobic.001G089500 RNA recognition motif containing protein, putative, expressed -
16 Sobic.003G104700 Rer1 protein, putative, expressed -
17 Sobic.004G310300 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
18 Sobic.007G045600 MSP domain containing protein, expressed -
19 Sobic.001G040800 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
20 Sobic.004G062400 LSM domain containing protein, expressed K11098: SNRPF, small nuclear ribonucleoprotein F


Gene co-expression network
sample Sobic009G164500 Sobic009G164500 Sobic002G376500 Sobic002G376500 Sobic009G164500--Sobic002G376500 Sobic003G189000 Sobic003G189000 Sobic009G164500--Sobic003G189000 Sobic001G408900 Sobic001G408900 Sobic009G164500--Sobic001G408900 Sobic001G433700 Sobic001G433700 Sobic009G164500--Sobic001G433700 Sobic002G084500 Sobic002G084500 Sobic009G164500--Sobic002G084500 Sobic002G159500 Sobic002G159500 Sobic009G164500--Sobic002G159500 Sobic006G141500 Sobic006G141500 Sobic009G164500--Sobic006G141500 Sobic002G296300 Sobic002G296300 Sobic009G164500--Sobic002G296300 Sobic009G077400 Sobic009G077400 Sobic009G164500--Sobic009G077400 Sobic003G362400 Sobic003G362400 Sobic002G376500--Sobic003G362400 Sobic010G042800 Sobic010G042800 Sobic002G376500--Sobic010G042800 Sobic001G529000 Sobic001G529000 Sobic002G376500--Sobic001G529000 Sobic010G210000 Sobic010G210000 Sobic002G376500--Sobic010G210000 Sobic001G309500 Sobic001G309500 Sobic002G376500--Sobic001G309500 Sobic002G376500--Sobic006G141500 Sobic002G218000 Sobic002G218000 Sobic002G376500--Sobic002G218000 Sobic002G376500--Sobic002G159500 Sobic010G153100 Sobic010G153100 Sobic002G376500--Sobic010G153100 Sobic003G189000--Sobic002G159500 Sobic003G189000--Sobic002G084500 Sobic003G189000--Sobic009G164500 Sobic010G121300 Sobic010G121300 Sobic003G189000--Sobic010G121300 Sobic004G339200 Sobic004G339200 Sobic003G189000--Sobic004G339200 Sobic009G146100 Sobic009G146100 Sobic003G189000--Sobic009G146100 Sobic001G233532 Sobic001G233532 Sobic003G189000--Sobic001G233532 Sobic003G189000--Sobic001G408900 Sobic008G097401 Sobic008G097401 Sobic003G189000--Sobic008G097401 Sobic001G408900--Sobic002G084500 Sobic001G408900--Sobic001G233532 Sobic001G058100 Sobic001G058100 Sobic001G408900--Sobic001G058100 Sobic007G096700 Sobic007G096700 Sobic001G408900--Sobic007G096700 Sobic002G419100 Sobic002G419100 Sobic001G408900--Sobic002G419100 Sobic001G408900--Sobic002G159500 Sobic006G281800 Sobic006G281800 Sobic001G408900--Sobic006G281800 Sobic010G042100 Sobic010G042100 Sobic001G408900--Sobic010G042100 Sobic004G276100 Sobic004G276100 Sobic001G408900--Sobic004G276100 Sobic009G149400 Sobic009G149400 Sobic001G433700--Sobic009G149400 Sobic001G018800 Sobic001G018800 Sobic001G433700--Sobic001G018800 Sobic002G187500 Sobic002G187500 Sobic001G433700--Sobic002G187500 Sobic010G023800 Sobic010G023800 Sobic001G433700--Sobic010G023800 Sobic001G433700--Sobic002G084500 Sobic001G224400 Sobic001G224400 Sobic001G433700--Sobic001G224400 Sobic004G272800 Sobic004G272800 Sobic001G433700--Sobic004G272800 Sobic001G132100 Sobic001G132100 Sobic001G433700--Sobic001G132100 Sobic010G154700 Sobic010G154700 Sobic001G433700--Sobic010G154700 Sobic002G084500--Sobic001G408900 Sobic002G084500--Sobic001G433700 Sobic001G331900 Sobic001G331900 Sobic002G084500--Sobic001G331900 Sobic004G284500 Sobic004G284500 Sobic002G084500--Sobic004G284500 Sobic002G084500--Sobic002G419100 Sobic002G153500 Sobic002G153500 Sobic002G084500--Sobic002G153500 Sobic002G084500--Sobic006G141500 Sobic008G189300 Sobic008G189300 Sobic002G084500--Sobic008G189300 Sobic002G084500--Sobic009G146100 Sobic002G159500--Sobic003G189000 Sobic002G159500--Sobic002G376500 Sobic002G222900 Sobic002G222900 Sobic002G159500--Sobic002G222900 Sobic003G104700 Sobic003G104700 Sobic002G159500--Sobic003G104700 Sobic004G130100 Sobic004G130100 Sobic002G159500--Sobic004G130100 Sobic002G196350 Sobic002G196350 Sobic002G159500--Sobic002G196350 Sobic002G159500--Sobic006G141500 Sobic002G159500--Sobic007G096700 Sobic001G501200 Sobic001G501200 Sobic002G159500--Sobic001G501200 Sobic003G253000 Sobic003G253000 Sobic006G141500--Sobic003G253000 Sobic010G243200 Sobic010G243200 Sobic006G141500--Sobic010G243200 Sobic002G282400 Sobic002G282400 Sobic006G141500--Sobic002G282400 Sobic006G141500--Sobic002G218000 Sobic004G300900 Sobic004G300900 Sobic006G141500--Sobic004G300900 Sobic003G350300 Sobic003G350300 Sobic006G141500--Sobic003G350300 Sobic008G161800 Sobic008G161800 Sobic006G141500--Sobic008G161800 Sobic004G248800 Sobic004G248800 Sobic006G141500--Sobic004G248800 Sobic002G046100 Sobic002G046100 Sobic006G141500--Sobic002G046100 Sobic005G176000 Sobic005G176000 Sobic002G296300--Sobic005G176000 Sobic002G296300--Sobic008G097401 Sobic010G204300 Sobic010G204300 Sobic002G296300--Sobic010G204300 Sobic007G186300 Sobic007G186300 Sobic002G296300--Sobic007G186300 Sobic003G220600 Sobic003G220600 Sobic002G296300--Sobic003G220600 Sobic003G115800 Sobic003G115800 Sobic002G296300--Sobic003G115800 Sobic003G332401 Sobic003G332401 Sobic002G296300--Sobic003G332401 Sobic001G403700 Sobic001G403700 Sobic002G296300--Sobic001G403700 Sobic003G007500 Sobic003G007500 Sobic002G296300--Sobic003G007500 Sobic003G152900 Sobic003G152900 Sobic009G077400--Sobic003G152900 Sobic002G090700 Sobic002G090700 Sobic009G077400--Sobic002G090700 Sobic004G310300 Sobic004G310300 Sobic009G077400--Sobic004G310300 Sobic006G222400 Sobic006G222400 Sobic009G077400--Sobic006G222400 Sobic010G266300 Sobic010G266300 Sobic009G077400--Sobic010G266300 Sobic004G066800 Sobic004G066800 Sobic009G077400--Sobic004G066800 Sobic001G010700 Sobic001G010700 Sobic009G077400--Sobic001G010700 Sobic009G077400--Sobic010G154700 Sobic009G077400--Sobic001G058100
Octagon: transcription factors


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