Gene annotation
Transcriptome id Sobic.009G189300.1
Synonym Sb09g024830
Functional annotation ubiquitin E3 ligase ICP0, putative, expressed
UniProt A0A1Z5R495
Pfam -
Panther DB PTHR33871 PTHR33871:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g42340.1 : ubiquitin E3 ligase ICP0, putative, expressed
MaizeGDB (Corn) Zm00025a044148
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G170500 histone H3, putative, expressed K11253: histone H3
2 Sobic.010G163732 - -
3 Sobic.003G034600 CAMK_CAMK_like_Aur_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
4 Sobic.006G031400 expressed protein -
5 Sobic.002G162300 expressed protein K11270: chromosome transmission fidelity protein 8
6 Sobic.006G191800 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
7 Sobic.001G205000 ATEB1A-like microtubule associated protein, putative, expressed K10436: microtubule-associated protein, RP/EB family
8 Sobic.009G120700 microtubule-binding protein TANGLED1, putative, expressed K18636: microtubule-binding protein TANGLED1
9 Sobic.003G279100 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
10 Sobic.002G247800 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL17 - SBP-box gene family member, expressed -
11 Sobic.004G132900 IQ calmodulin-binding motif family protein, putative, expressed -
12 Sobic.001G470100 OsFBX77 - F-box domain containing protein, expressed -
13 Sobic.001G296000 expressed protein -
14 Sobic.005G142500 plant protein of unknown function domain containing protein, expressed -
15 Sobic.004G285900 HMG1/2, putative, expressed -
16 Sobic.007G214700 fasciclin domain containing protein, expressed -
17 Sobic.001G091500 expressed protein -
18 Sobic.006G076400 histone H3, putative, expressed K11253: histone H3
19 Sobic.004G279601 - K11254: histone H4
20 Sobic.004G170900 expressed protein -


Gene co-expression network
sample Sobic009G189300 Sobic009G189300 Sobic004G170500 Sobic004G170500 Sobic009G189300--Sobic004G170500 Sobic010G163732 Sobic010G163732 Sobic009G189300--Sobic010G163732 Sobic003G034600 Sobic003G034600 Sobic009G189300--Sobic003G034600 Sobic006G031400 Sobic006G031400 Sobic009G189300--Sobic006G031400 Sobic002G162300 Sobic002G162300 Sobic009G189300--Sobic002G162300 Sobic006G191800 Sobic006G191800 Sobic009G189300--Sobic006G191800 Sobic001G205000 Sobic001G205000 Sobic009G189300--Sobic001G205000 Sobic009G120700 Sobic009G120700 Sobic009G189300--Sobic009G120700 Sobic003G279100 Sobic003G279100 Sobic009G189300--Sobic003G279100 Sobic006G076400 Sobic006G076400 Sobic004G170500--Sobic006G076400 Sobic003G057100 Sobic003G057100 Sobic004G170500--Sobic003G057100 Sobic006G134900 Sobic006G134900 Sobic004G170500--Sobic006G134900 Sobic001G078600 Sobic001G078600 Sobic004G170500--Sobic001G078600 Sobic004G279601 Sobic004G279601 Sobic004G170500--Sobic004G279601 Sobic003G347900 Sobic003G347900 Sobic004G170500--Sobic003G347900 Sobic006G081800 Sobic006G081800 Sobic004G170500--Sobic006G081800 Sobic002G136600 Sobic002G136600 Sobic004G170500--Sobic002G136600 Sobic004G170500--Sobic001G205000 Sobic003G383100 Sobic003G383100 Sobic010G163732--Sobic003G383100 Sobic003G137700 Sobic003G137700 Sobic010G163732--Sobic003G137700 Sobic001G439100 Sobic001G439100 Sobic010G163732--Sobic001G439100 Sobic003G174700 Sobic003G174700 Sobic010G163732--Sobic003G174700 Sobic010G171800 Sobic010G171800 Sobic010G163732--Sobic010G171800 Sobic010G163732--Sobic009G120700 Sobic002G095400 Sobic002G095400 Sobic010G163732--Sobic002G095400 Sobic010G215800 Sobic010G215800 Sobic010G163732--Sobic010G215800 Sobic001G160100 Sobic001G160100 Sobic010G163732--Sobic001G160100 Sobic004G217450 Sobic004G217450 Sobic003G034600--Sobic004G217450 Sobic003G122200 Sobic003G122200 Sobic003G034600--Sobic003G122200 Sobic001G475500 Sobic001G475500 Sobic003G034600--Sobic001G475500 Sobic003G307400 Sobic003G307400 Sobic003G034600--Sobic003G307400 Sobic003G034600--Sobic006G191800 Sobic006G200000 Sobic006G200000 Sobic003G034600--Sobic006G200000 Sobic003G160700 Sobic003G160700 Sobic003G034600--Sobic003G160700 Sobic009G173500 Sobic009G173500 Sobic003G034600--Sobic009G173500 Sobic007G150800 Sobic007G150800 Sobic003G034600--Sobic007G150800 Sobic001G296000 Sobic001G296000 Sobic006G031400--Sobic001G296000 Sobic010G101100 Sobic010G101100 Sobic006G031400--Sobic010G101100 Sobic001G088000 Sobic001G088000 Sobic006G031400--Sobic001G088000 Sobic006G031400--Sobic009G120700 Sobic004G047100 Sobic004G047100 Sobic006G031400--Sobic004G047100 Sobic009G157600 Sobic009G157600 Sobic006G031400--Sobic009G157600 Sobic006G031400--Sobic001G078600 Sobic002G113600 Sobic002G113600 Sobic006G031400--Sobic002G113600 Sobic001G230300 Sobic001G230300 Sobic006G031400--Sobic001G230300 Sobic002G162300--Sobic001G078600 Sobic004G285900 Sobic004G285900 Sobic002G162300--Sobic004G285900 Sobic002G162300--Sobic006G081800 Sobic006G102900 Sobic006G102900 Sobic002G162300--Sobic006G102900 Sobic006G138900 Sobic006G138900 Sobic002G162300--Sobic006G138900 Sobic002G162300--Sobic009G120700 Sobic001G261549 Sobic001G261549 Sobic002G162300--Sobic001G261549 Sobic001G401600 Sobic001G401600 Sobic002G162300--Sobic001G401600 Sobic002G162300--Sobic004G279601 Sobic010G221300 Sobic010G221300 Sobic006G191800--Sobic010G221300 Sobic001G529400 Sobic001G529400 Sobic006G191800--Sobic001G529400 Sobic010G047100 Sobic010G047100 Sobic006G191800--Sobic010G047100 Sobic001G361600 Sobic001G361600 Sobic006G191800--Sobic001G361600 Sobic003G125650 Sobic003G125650 Sobic006G191800--Sobic003G125650 Sobic001G313200 Sobic001G313200 Sobic006G191800--Sobic001G313200 Sobic002G389400 Sobic002G389400 Sobic006G191800--Sobic002G389400 Sobic001G295200 Sobic001G295200 Sobic006G191800--Sobic001G295200 Sobic006G191800--Sobic003G160700 Sobic001G205000--Sobic004G279601 Sobic007G207700 Sobic007G207700 Sobic001G205000--Sobic007G207700 Sobic003G328500 Sobic003G328500 Sobic001G205000--Sobic003G328500 Sobic001G205000--Sobic004G285900 Sobic006G134200 Sobic006G134200 Sobic001G205000--Sobic006G134200 Sobic001G205000--Sobic003G057100 Sobic005G016300 Sobic005G016300 Sobic001G205000--Sobic005G016300 Sobic001G205000--Sobic001G078600 Sobic001G205000--Sobic006G076400 Sobic001G091500 Sobic001G091500 Sobic009G120700--Sobic001G091500 Sobic010G119300 Sobic010G119300 Sobic009G120700--Sobic010G119300 Sobic003G102000 Sobic003G102000 Sobic009G120700--Sobic003G102000 Sobic009G120700--Sobic003G328500 Sobic003G387700 Sobic003G387700 Sobic009G120700--Sobic003G387700 Sobic002G426800 Sobic002G426800 Sobic009G120700--Sobic002G426800 Sobic007G100600 Sobic007G100600 Sobic009G120700--Sobic007G100600 Sobic009G120700--Sobic001G230300 Sobic007G132900 Sobic007G132900 Sobic009G120700--Sobic007G132900 Sobic003G279100--Sobic004G217450 Sobic006G149200 Sobic006G149200 Sobic003G279100--Sobic006G149200 Sobic003G279100--Sobic004G285900 Sobic001G300400 Sobic001G300400 Sobic003G279100--Sobic001G300400 Sobic010G222100 Sobic010G222100 Sobic003G279100--Sobic010G222100 Sobic003G279100--Sobic006G081800 Sobic003G279100--Sobic010G215800 Sobic001G505000 Sobic001G505000 Sobic003G279100--Sobic001G505000 Sobic003G279100--Sobic001G261549
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.