Gene annotation
Transcriptome id Sobic.010G016900.1
Synonym Sb10g001640, PEPKR1
Functional annotation calcium-dependent protein kinase isoform AK1, putative, expressed
UniProt C5Z2X8
Pfam PF00069
Panther DB PTHR24349 PTHR24349:SF111
NCBI CDD KOG0032; Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
KEGG Orthology K13412; calcium-dependent protein kinase
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G12580 : phosphoenolpyruvate carboxylase-related kinase 1
RAP-DB (Rice) LOC_Os06g03682.1 : calcium-dependent protein kinase isoform AK1, putative, expressed
MaizeGDB (Corn) Zm00025a041347 , Zm00025a033877 , Zm00025a037842
Brachypodium KQK12836 , KQK10184 , KQK19649 , KQK19648 , PNT73998 , PNT73999
Barley HORVU3Hr1G079040.5 , HORVU3Hr1G079040.4 , HORVU3Hr1G079040.7 , HORVU3Hr1G079040.6 , HORVU3Hr1G079040.1 , HORVU3Hr1G079040.3 , HORVU3Hr1G079040.2 , HORVU7Hr1G056060.1 , HORVU7Hr1G056060.2 , HORVU7Hr1G056060.4 , HORVU7Hr1G056060.5 , HORVU7Hr1G056060.6 , HORVU7Hr1G056060.3 , HORVU7Hr1G056060.12 , HORVU7Hr1G056060.11 , HORVU7Hr1G010500.1 , HORVU7Hr1G010500.2 , HORVU7Hr1G056060.8 , HORVU7Hr1G056060.9 , HORVU7Hr1G056060.7 , HORVU7Hr1G010570.1 , HORVU7Hr1G010570.2 , HORVU7Hr1G010490.22 , HORVU7Hr1G010490.23 , HORVU7Hr1G010490.21 , HORVU7Hr1G010490.24 , HORVU7Hr1G010490.25
Wheat TraesCS5D02G434500 , TraesCS3A02G334200 , TraesCS7B02G165200 , TraesCS4A02G432300 , TraesCS5D02G434500 , TraesCS7D02G052900 , TraesCS5B02G428400 , TraesCS5B02G428400 , TraesCSU02G091900 , TraesCS3B02G365200 , TraesCS7A02G267000 , TraesCS3D02G327700 , TraesCS3D02G327700 , TraesCS3D02G327700 , TraesCS5A02G426500 , TraesCS7D02G267700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G420500 spotted leaf 11, putative, expressed -
2 Sobic.004G182900 PHD finger protein, putative, expressed -
3 Sobic.009G191100 expressed protein -
4 Sobic.006G181000 -(PubMedID : 23915383)@PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
5 Sobic.002G233900 AGAP005770-PA, putative, expressed -
6 Sobic.002G402600 pleckstrin homology domain-containing protein, putative, expressed -
7 Sobic.001G375700 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
8 Sobic.003G257700 expressed protein -
9 Sobic.002G418200 B3 DNA binding domain containing protein, putative, expressed -
10 Sobic.004G147800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidyl-prolyl isomerase, putative, expressed -
11 Sobic.001G427300 glycosyl transferase, group 1 domain containing protein, expressed K06119: sulfoquinovosyltransferase
12 Sobic.007G173200 IDD5(PubMedID : 24676859)@ZOS8-12 - C2H2 zinc finger protein, expressed -
13 Sobic.006G089500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor 9, putative, expressed K14486: K14486, auxin response factor
14 Sobic.010G145800 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
15 Sobic.004G174400 ZOS2-09 - C2H2 zinc finger protein, expressed -
16 Sobic.001G085600 ABC transporter, ATP-binding protein, putative, expressed -
17 Sobic.001G486300 phosphatidylinositol transfer, putative, expressed -
18 Sobic.002G083900 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
19 Sobic.003G210900 protein kinase, putative, expressed -
20 Sobic.009G209200 serine acetyltransferase protein, putative, expressed K00640: serine O-acetyltransferase


Gene co-expression network
sample Sobic010G016900 Sobic010G016900 Sobic001G420500 Sobic001G420500 Sobic010G016900--Sobic001G420500 Sobic004G182900 Sobic004G182900 Sobic010G016900--Sobic004G182900 Sobic009G191100 Sobic009G191100 Sobic010G016900--Sobic009G191100 Sobic006G181000 Sobic006G181000 Sobic010G016900--Sobic006G181000 Sobic002G233900 Sobic002G233900 Sobic010G016900--Sobic002G233900 Sobic002G402600 Sobic002G402600 Sobic010G016900--Sobic002G402600 Sobic001G375700 Sobic001G375700 Sobic010G016900--Sobic001G375700 Sobic003G257700 Sobic003G257700 Sobic010G016900--Sobic003G257700 Sobic002G418200 Sobic002G418200 Sobic010G016900--Sobic002G418200 Sobic001G420500--Sobic002G402600 Sobic001G083400 Sobic001G083400 Sobic001G420500--Sobic001G083400 Sobic001G420500--Sobic009G191100 Sobic001G486300 Sobic001G486300 Sobic001G420500--Sobic001G486300 Sobic001G204000 Sobic001G204000 Sobic001G420500--Sobic001G204000 Sobic001G420500--Sobic001G375700 Sobic005G023900 Sobic005G023900 Sobic001G420500--Sobic005G023900 Sobic010G277500 Sobic010G277500 Sobic001G420500--Sobic010G277500 Sobic001G420500--Sobic010G016900 Sobic004G294700 Sobic004G294700 Sobic004G182900--Sobic004G294700 Sobic004G182900--Sobic009G191100 Sobic007G136800 Sobic007G136800 Sobic004G182900--Sobic007G136800 Sobic004G178100 Sobic004G178100 Sobic004G182900--Sobic004G178100 Sobic006G031800 Sobic006G031800 Sobic004G182900--Sobic006G031800 Sobic004G183000 Sobic004G183000 Sobic004G182900--Sobic004G183000 Sobic002G358500 Sobic002G358500 Sobic004G182900--Sobic002G358500 Sobic004G182900--Sobic010G016900 Sobic010G043800 Sobic010G043800 Sobic004G182900--Sobic010G043800 Sobic009G191100--Sobic002G358500 Sobic002G121600 Sobic002G121600 Sobic009G191100--Sobic002G121600 Sobic007G113800 Sobic007G113800 Sobic009G191100--Sobic007G113800 Sobic009G191100--Sobic004G182900 Sobic004G299000 Sobic004G299000 Sobic009G191100--Sobic004G299000 Sobic002G031600 Sobic002G031600 Sobic009G191100--Sobic002G031600 Sobic007G173200 Sobic007G173200 Sobic009G191100--Sobic007G173200 Sobic002G228700 Sobic002G228700 Sobic009G191100--Sobic002G228700 Sobic004G258700 Sobic004G258700 Sobic009G191100--Sobic004G258700 Sobic006G181000--Sobic004G294700 Sobic002G296100 Sobic002G296100 Sobic006G181000--Sobic002G296100 Sobic002G145000 Sobic002G145000 Sobic006G181000--Sobic002G145000 Sobic007G029700 Sobic007G029700 Sobic006G181000--Sobic007G029700 Sobic006G181000--Sobic004G182900 Sobic002G218500 Sobic002G218500 Sobic006G181000--Sobic002G218500 Sobic001G037500 Sobic001G037500 Sobic006G181000--Sobic001G037500 Sobic006G181000--Sobic010G016900 Sobic008G001900 Sobic008G001900 Sobic006G181000--Sobic008G001900 Sobic003G153000 Sobic003G153000 Sobic002G233900--Sobic003G153000 Sobic008G047700 Sobic008G047700 Sobic002G233900--Sobic008G047700 Sobic009G260500 Sobic009G260500 Sobic002G233900--Sobic009G260500 Sobic003G023400 Sobic003G023400 Sobic002G233900--Sobic003G023400 Sobic002G233900--Sobic002G402600 Sobic010G145800 Sobic010G145800 Sobic002G233900--Sobic010G145800 Sobic003G173950 Sobic003G173950 Sobic002G233900--Sobic003G173950 Sobic003G101500 Sobic003G101500 Sobic002G233900--Sobic003G101500 Sobic010G096000 Sobic010G096000 Sobic002G233900--Sobic010G096000 Sobic002G031400 Sobic002G031400 Sobic002G402600--Sobic002G031400 Sobic002G402600--Sobic001G420500 Sobic002G402600--Sobic009G260500 Sobic009G210500 Sobic009G210500 Sobic002G402600--Sobic009G210500 Sobic002G402600--Sobic010G277500 Sobic005G039500 Sobic005G039500 Sobic002G402600--Sobic005G039500 Sobic003G161000 Sobic003G161000 Sobic002G402600--Sobic003G161000 Sobic001G407200 Sobic001G407200 Sobic002G402600--Sobic001G407200 Sobic008G150700 Sobic008G150700 Sobic002G402600--Sobic008G150700 Sobic004G084300 Sobic004G084300 Sobic001G375700--Sobic004G084300 Sobic002G126500 Sobic002G126500 Sobic001G375700--Sobic002G126500 Sobic001G281600 Sobic001G281600 Sobic001G375700--Sobic001G281600 Sobic003G197800 Sobic003G197800 Sobic001G375700--Sobic003G197800 Sobic001G107500 Sobic001G107500 Sobic001G375700--Sobic001G107500 Sobic001G375700--Sobic007G136800 Sobic007G054400 Sobic007G054400 Sobic001G375700--Sobic007G054400 Sobic008G113100 Sobic008G113100 Sobic001G375700--Sobic008G113100 Sobic001G227200 Sobic001G227200 Sobic001G375700--Sobic001G227200 Sobic003G257700--Sobic010G016900 Sobic001G261545 Sobic001G261545 Sobic003G257700--Sobic001G261545 Sobic007G089500 Sobic007G089500 Sobic003G257700--Sobic007G089500 Sobic009G104800 Sobic009G104800 Sobic003G257700--Sobic009G104800 Sobic003G257700--Sobic004G182900 Sobic003G257700--Sobic002G218500 Sobic003G257700--Sobic004G178100 Sobic003G319800 Sobic003G319800 Sobic003G257700--Sobic003G319800 Sobic008G140200 Sobic008G140200 Sobic003G257700--Sobic008G140200 Sobic008G136200 Sobic008G136200 Sobic002G418200--Sobic008G136200 Sobic002G076400 Sobic002G076400 Sobic002G418200--Sobic002G076400 Sobic001G427300 Sobic001G427300 Sobic002G418200--Sobic001G427300 Sobic002G418200--Sobic001G486300 Sobic009G209200 Sobic009G209200 Sobic002G418200--Sobic009G209200 Sobic005G212500 Sobic005G212500 Sobic002G418200--Sobic005G212500 Sobic009G215800 Sobic009G215800 Sobic002G418200--Sobic009G215800 Sobic002G418200--Sobic010G016900 Sobic008G096100 Sobic008G096100 Sobic002G418200--Sobic008G096100
Octagon: transcription factors


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