Gene annotation
Transcriptome id Sobic.002G418200.1,Sobic.002G418200.2
Synonym VAL2, HSI2-L1, HSL1, Sb02g043000
Functional annotation B3 DNA binding domain containing protein, putative, expressed
UniProt C5X5M1
Pfam PF07496 PF02362
Panther DB PTHR23336 PTHR23336:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT4G32010 : HSI2-like 1
RAP-DB (Rice) LOC_Os07g48200.1 : B3 DNA binding domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a015444 , Zm00025a043643 , Zm00025a021412 , Zm00025a049160 , Zm00025a045652
Brachypodium KQK14628 , KQK14627
Barley HORVU2Hr1G017760.1 , HORVU2Hr1G017760.2 , HORVU2Hr1G017760.5 , HORVU2Hr1G017760.4 , HORVU2Hr1G017760.7 , HORVU2Hr1G017760.6 , HORVU2Hr1G017760.3 , HORVU5Hr1G109720.2
Wheat TraesCS2A02G105600 , TraesCS2A02G105600 , TraesCS2B02G122500 , TraesCS2D02G105300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G136200 spotted leaf 11, putative, expressed -
2 Sobic.002G076400 structural constituent of ribosome, putative, expressed -
3 Sobic.001G427300 glycosyl transferase, group 1 domain containing protein, expressed K06119: sulfoquinovosyltransferase
4 Sobic.001G486300 phosphatidylinositol transfer, putative, expressed -
5 Sobic.009G209200 serine acetyltransferase protein, putative, expressed K00640: serine O-acetyltransferase
6 Sobic.005G212500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NBS-LRR disease resistance protein, putative, expressed -
7 Sobic.009G215800 OsFBX173 - F-box domain containing protein, expressed -
8 Sobic.010G016900 calcium-dependent protein kinase isoform AK1, putative, expressed K13412: calcium-dependent protein kinase
9 Sobic.008G096100 expressed protein -
10 Sobic.002G430500 phospholipase C, putative, expressed K05857: phosphatidylinositol phospholipase C, delta
11 Sobic.008G041700 TLD family protein, putative, expressed -
12 Sobic.009G134500 WD domain, G-beta repeat domain containing protein, expressed K11801: DDB1- and CUL4-associated factor 11
13 Sobic.005G110544 - -
14 Sobic.007G191100 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
15 Sobic.003G220200 protein kinase family protein, putative, expressed K17541: SCY1-like protein 2
16 Sobic.002G144933 - -
17 Sobic.001G368400 glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
18 Sobic.009G214600 possible lysine decarboxylase domain containing protein, expressed -
19 Sobic.003G136800 SNF7 domain containing protein, putative, expressed K15053: charged multivesicular body protein 7
20 Sobic.009G045700 E3 ubiquitin-protein ligase SINA-like, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1


Gene co-expression network
sample Sobic002G418200 Sobic002G418200 Sobic008G136200 Sobic008G136200 Sobic002G418200--Sobic008G136200 Sobic002G076400 Sobic002G076400 Sobic002G418200--Sobic002G076400 Sobic001G427300 Sobic001G427300 Sobic002G418200--Sobic001G427300 Sobic001G486300 Sobic001G486300 Sobic002G418200--Sobic001G486300 Sobic009G209200 Sobic009G209200 Sobic002G418200--Sobic009G209200 Sobic005G212500 Sobic005G212500 Sobic002G418200--Sobic005G212500 Sobic009G215800 Sobic009G215800 Sobic002G418200--Sobic009G215800 Sobic010G016900 Sobic010G016900 Sobic002G418200--Sobic010G016900 Sobic008G096100 Sobic008G096100 Sobic002G418200--Sobic008G096100 Sobic002G144933 Sobic002G144933 Sobic008G136200--Sobic002G144933 Sobic007G205800 Sobic007G205800 Sobic008G136200--Sobic007G205800 Sobic007G011400 Sobic007G011400 Sobic008G136200--Sobic007G011400 Sobic008G136200--Sobic009G215800 Sobic009G065100 Sobic009G065100 Sobic008G136200--Sobic009G065100 Sobic001G094000 Sobic001G094000 Sobic008G136200--Sobic001G094000 Sobic002G157000 Sobic002G157000 Sobic008G136200--Sobic002G157000 Sobic003G197800 Sobic003G197800 Sobic008G136200--Sobic003G197800 Sobic009G087800 Sobic009G087800 Sobic008G136200--Sobic009G087800 Sobic007G191100 Sobic007G191100 Sobic002G076400--Sobic007G191100 Sobic003G315332 Sobic003G315332 Sobic002G076400--Sobic003G315332 Sobic002G076400--Sobic007G011400 Sobic007G142050 Sobic007G142050 Sobic002G076400--Sobic007G142050 Sobic008G117200 Sobic008G117200 Sobic002G076400--Sobic008G117200 Sobic010G263800 Sobic010G263800 Sobic002G076400--Sobic010G263800 Sobic002G177400 Sobic002G177400 Sobic002G076400--Sobic002G177400 Sobic008G068800 Sobic008G068800 Sobic002G076400--Sobic008G068800 Sobic004G061900 Sobic004G061900 Sobic002G076400--Sobic004G061900 Sobic001G427300--Sobic001G486300 Sobic009G134500 Sobic009G134500 Sobic001G427300--Sobic009G134500 Sobic004G164400 Sobic004G164400 Sobic001G427300--Sobic004G164400 Sobic001G427300--Sobic008G136200 Sobic001G420200 Sobic001G420200 Sobic001G427300--Sobic001G420200 Sobic001G427300--Sobic009G215800 Sobic004G290800 Sobic004G290800 Sobic001G427300--Sobic004G290800 Sobic009G127900 Sobic009G127900 Sobic001G427300--Sobic009G127900 Sobic004G174400 Sobic004G174400 Sobic001G427300--Sobic004G174400 Sobic005G023900 Sobic005G023900 Sobic001G486300--Sobic005G023900 Sobic001G486300--Sobic001G420200 Sobic003G268300 Sobic003G268300 Sobic001G486300--Sobic003G268300 Sobic001G486300--Sobic007G011400 Sobic001G497300 Sobic001G497300 Sobic001G486300--Sobic001G497300 Sobic001G486300--Sobic004G290800 Sobic001G107500 Sobic001G107500 Sobic001G486300--Sobic001G107500 Sobic001G251700 Sobic001G251700 Sobic001G486300--Sobic001G251700 Sobic003G220200 Sobic003G220200 Sobic001G486300--Sobic003G220200 Sobic009G209200--Sobic001G427300 Sobic010G280100 Sobic010G280100 Sobic009G209200--Sobic010G280100 Sobic009G209200--Sobic008G136200 Sobic009G209200--Sobic009G215800 Sobic010G068400 Sobic010G068400 Sobic009G209200--Sobic010G068400 Sobic009G209200--Sobic004G174400 Sobic007G052900 Sobic007G052900 Sobic009G209200--Sobic007G052900 Sobic002G122600 Sobic002G122600 Sobic009G209200--Sobic002G122600 Sobic002G380500 Sobic002G380500 Sobic009G209200--Sobic002G380500 Sobic009G004700 Sobic009G004700 Sobic005G212500--Sobic009G004700 Sobic005G212500--Sobic008G136200 Sobic008G068400 Sobic008G068400 Sobic005G212500--Sobic008G068400 Sobic009G045700 Sobic009G045700 Sobic005G212500--Sobic009G045700 Sobic006G009400 Sobic006G009400 Sobic005G212500--Sobic006G009400 Sobic007G099500 Sobic007G099500 Sobic005G212500--Sobic007G099500 Sobic007G073400 Sobic007G073400 Sobic005G212500--Sobic007G073400 Sobic003G424100 Sobic003G424100 Sobic005G212500--Sobic003G424100 Sobic002G051450 Sobic002G051450 Sobic005G212500--Sobic002G051450 Sobic009G215800--Sobic009G065100 Sobic004G084300 Sobic004G084300 Sobic009G215800--Sobic004G084300 Sobic009G215800--Sobic008G136200 Sobic001G281600 Sobic001G281600 Sobic009G215800--Sobic001G281600 Sobic001G222500 Sobic001G222500 Sobic009G215800--Sobic001G222500 Sobic009G215800--Sobic001G107500 Sobic003G084700 Sobic003G084700 Sobic009G215800--Sobic003G084700 Sobic001G407200 Sobic001G407200 Sobic009G215800--Sobic001G407200 Sobic008G067600 Sobic008G067600 Sobic009G215800--Sobic008G067600 Sobic001G420500 Sobic001G420500 Sobic010G016900--Sobic001G420500 Sobic004G182900 Sobic004G182900 Sobic010G016900--Sobic004G182900 Sobic009G191100 Sobic009G191100 Sobic010G016900--Sobic009G191100 Sobic006G181000 Sobic006G181000 Sobic010G016900--Sobic006G181000 Sobic002G233900 Sobic002G233900 Sobic010G016900--Sobic002G233900 Sobic002G402600 Sobic002G402600 Sobic010G016900--Sobic002G402600 Sobic001G375700 Sobic001G375700 Sobic010G016900--Sobic001G375700 Sobic003G257700 Sobic003G257700 Sobic010G016900--Sobic003G257700 Sobic010G016900--Sobic002G418200 Sobic008G041700 Sobic008G041700 Sobic008G096100--Sobic008G041700 Sobic008G153600 Sobic008G153600 Sobic008G096100--Sobic008G153600 Sobic004G198000 Sobic004G198000 Sobic008G096100--Sobic004G198000 Sobic008G096100--Sobic008G136200 Sobic008G096100--Sobic007G191100 Sobic001G464100 Sobic001G464100 Sobic008G096100--Sobic001G464100 Sobic008G096100--Sobic007G205800 SobicK016900 SobicK016900 Sobic008G096100--SobicK016900 Sobic004G150400 Sobic004G150400 Sobic008G096100--Sobic004G150400
Octagon: transcription factors


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