Gene annotation
Transcriptome id Sobic.003G257700.2,Sobic.003G257700.1
Synonym Sb03g031225
Functional annotation expressed protein
UniProt C5XGR4 , C5XGQ8
Pfam PF07797
Panther DB PTHR33130 PTHR33130:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G20300 : Protein of unknown function (DUF1639)
RAP-DB (Rice) LOC_Os01g48830.2 : expressed protein
MaizeGDB (Corn) Zm00025a028032
Brachypodium KQK09197
Barley HORVU3Hr1G062740.8 , HORVU3Hr1G062740.2 , HORVU3Hr1G062740.3 , HORVU3Hr1G062740.1 , HORVU3Hr1G062740.6 , HORVU3Hr1G062740.7 , HORVU3Hr1G062740.4 , HORVU3Hr1G062740.5 , HORVU3Hr1G062740.10 , HORVU3Hr1G062740.12
Wheat TraesCS3B02G300600 , TraesCS3D02G267200 , TraesCS3A02G267100 , TraesCS3A02G267100
Populus -


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cDNA sequences
Sobic.003G257700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G016900 calcium-dependent protein kinase isoform AK1, putative, expressed K13412: calcium-dependent protein kinase
2 Sobic.001G261545 - K01669: deoxyribodipyrimidine photo-lyase
3 Sobic.007G089500 syntaxin 6, N-terminal domain containing protein, expressed -
4 Sobic.009G104800 AMP deaminase, putative, expressed K01490: AMP deaminase
5 Sobic.004G182900 PHD finger protein, putative, expressed -
6 Sobic.002G218500 lecithine cholesterol acyltransferase, putative, expressed K00679: phospholipid:diacylglycerol acyltransferase
7 Sobic.004G178100 uncharacterized oxidoreductase yoxD, putative, expressed -
8 Sobic.003G319800 bHelix-loop-helix transcription factor, putative, expressed -
9 Sobic.008G140200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.003G024300 glutathione gamma-glutamylcysteinyltransferase 1, putative, expressed K05941: glutathione gamma-glutamylcysteinyltransferase
11 Sobic.010G039500 genetic modifier, putative, expressed -
12 Sobic.008G131100 xaa-Pro aminopeptidase, putative, expressed K01262: Xaa-Pro aminopeptidase
13 Sobic.004G147800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidyl-prolyl isomerase, putative, expressed -
14 Sobic.004G125700 isochorismatase family protein, putative, expressed -
15 Sobic.008G091400 nucleoside diphosphate kinase, putative, expressed -
16 Sobic.005G073200 DUF803 domain containing, putative, expressed -
17 Sobic.004G270600 MYB family transcription factor, putative, expressed -
18 Sobic.006G089500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor 9, putative, expressed K14486: K14486, auxin response factor
19 Sobic.008G117000 expressed protein K13457: RPM1, disease resistance protein RPM1
20 Sobic.006G158100 tRNA-dihydrouridine synthase, putative, expressed K05543: tRNA-dihydrouridine synthase 2


Gene co-expression network
sample Sobic003G257700 Sobic003G257700 Sobic010G016900 Sobic010G016900 Sobic003G257700--Sobic010G016900 Sobic001G261545 Sobic001G261545 Sobic003G257700--Sobic001G261545 Sobic007G089500 Sobic007G089500 Sobic003G257700--Sobic007G089500 Sobic009G104800 Sobic009G104800 Sobic003G257700--Sobic009G104800 Sobic004G182900 Sobic004G182900 Sobic003G257700--Sobic004G182900 Sobic002G218500 Sobic002G218500 Sobic003G257700--Sobic002G218500 Sobic004G178100 Sobic004G178100 Sobic003G257700--Sobic004G178100 Sobic003G319800 Sobic003G319800 Sobic003G257700--Sobic003G319800 Sobic008G140200 Sobic008G140200 Sobic003G257700--Sobic008G140200 Sobic001G420500 Sobic001G420500 Sobic010G016900--Sobic001G420500 Sobic010G016900--Sobic004G182900 Sobic009G191100 Sobic009G191100 Sobic010G016900--Sobic009G191100 Sobic006G181000 Sobic006G181000 Sobic010G016900--Sobic006G181000 Sobic002G233900 Sobic002G233900 Sobic010G016900--Sobic002G233900 Sobic002G402600 Sobic002G402600 Sobic010G016900--Sobic002G402600 Sobic001G375700 Sobic001G375700 Sobic010G016900--Sobic001G375700 Sobic010G016900--Sobic003G257700 Sobic002G418200 Sobic002G418200 Sobic010G016900--Sobic002G418200 Sobic007G136200 Sobic007G136200 Sobic001G261545--Sobic007G136200 Sobic010G171600 Sobic010G171600 Sobic001G261545--Sobic010G171600 Sobic005G100600 Sobic005G100600 Sobic001G261545--Sobic005G100600 Sobic009G103000 Sobic009G103000 Sobic001G261545--Sobic009G103000 Sobic003G264800 Sobic003G264800 Sobic001G261545--Sobic003G264800 Sobic007G058001 Sobic007G058001 Sobic001G261545--Sobic007G058001 Sobic001G085600 Sobic001G085600 Sobic001G261545--Sobic001G085600 Sobic006G232600 Sobic006G232600 Sobic001G261545--Sobic006G232600 Sobic001G436400 Sobic001G436400 Sobic001G261545--Sobic001G436400 Sobic010G188600 Sobic010G188600 Sobic007G089500--Sobic010G188600 Sobic006G261700 Sobic006G261700 Sobic007G089500--Sobic006G261700 Sobic005G073200 Sobic005G073200 Sobic007G089500--Sobic005G073200 Sobic009G063100 Sobic009G063100 Sobic007G089500--Sobic009G063100 Sobic002G148100 Sobic002G148100 Sobic007G089500--Sobic002G148100 Sobic001G514800 Sobic001G514800 Sobic007G089500--Sobic001G514800 Sobic007G089500--Sobic001G085600 Sobic009G210200 Sobic009G210200 Sobic007G089500--Sobic009G210200 Sobic007G089500--Sobic002G218500 Sobic004G125700 Sobic004G125700 Sobic009G104800--Sobic004G125700 Sobic003G024300 Sobic003G024300 Sobic009G104800--Sobic003G024300 Sobic001G329400 Sobic001G329400 Sobic009G104800--Sobic001G329400 Sobic006G077400 Sobic006G077400 Sobic009G104800--Sobic006G077400 Sobic006G244000 Sobic006G244000 Sobic009G104800--Sobic006G244000 Sobic007G140800 Sobic007G140800 Sobic009G104800--Sobic007G140800 Sobic003G256700 Sobic003G256700 Sobic009G104800--Sobic003G256700 Sobic007G161500 Sobic007G161500 Sobic009G104800--Sobic007G161500 Sobic010G095000 Sobic010G095000 Sobic009G104800--Sobic010G095000 Sobic004G294700 Sobic004G294700 Sobic004G182900--Sobic004G294700 Sobic004G182900--Sobic009G191100 Sobic007G136800 Sobic007G136800 Sobic004G182900--Sobic007G136800 Sobic004G182900--Sobic004G178100 Sobic006G031800 Sobic006G031800 Sobic004G182900--Sobic006G031800 Sobic004G183000 Sobic004G183000 Sobic004G182900--Sobic004G183000 Sobic002G358500 Sobic002G358500 Sobic004G182900--Sobic002G358500 Sobic004G182900--Sobic010G016900 Sobic010G043800 Sobic010G043800 Sobic004G182900--Sobic010G043800 Sobic006G128300 Sobic006G128300 Sobic002G218500--Sobic006G128300 Sobic002G218500--Sobic006G031800 Sobic006G038500 Sobic006G038500 Sobic002G218500--Sobic006G038500 Sobic001G043800 Sobic001G043800 Sobic002G218500--Sobic001G043800 Sobic002G431300 Sobic002G431300 Sobic002G218500--Sobic002G431300 Sobic007G029700 Sobic007G029700 Sobic002G218500--Sobic007G029700 Sobic001G516901 Sobic001G516901 Sobic002G218500--Sobic001G516901 Sobic004G079800 Sobic004G079800 Sobic002G218500--Sobic004G079800 Sobic005G084800 Sobic005G084800 Sobic002G218500--Sobic005G084800 Sobic002G000600 Sobic002G000600 Sobic004G178100--Sobic002G000600 Sobic002G020400 Sobic002G020400 Sobic004G178100--Sobic002G020400 Sobic004G178100--Sobic010G043800 Sobic006G173600 Sobic006G173600 Sobic004G178100--Sobic006G173600 Sobic006G158100 Sobic006G158100 Sobic004G178100--Sobic006G158100 Sobic001G198100 Sobic001G198100 Sobic004G178100--Sobic001G198100 Sobic003G247400 Sobic003G247400 Sobic004G178100--Sobic003G247400 Sobic004G337400 Sobic004G337400 Sobic004G178100--Sobic004G337400 Sobic004G178100--Sobic001G516901 Sobic010G023700 Sobic010G023700 Sobic003G319800--Sobic010G023700 Sobic003G319800--Sobic001G085600 Sobic001G292700 Sobic001G292700 Sobic003G319800--Sobic001G292700 Sobic003G319800--Sobic003G024300 Sobic003G319800--Sobic007G136200 Sobic002G172700 Sobic002G172700 Sobic003G319800--Sobic002G172700 Sobic003G319800--Sobic005G100600 Sobic003G319800--Sobic001G261545 Sobic001G020100 Sobic001G020100 Sobic003G319800--Sobic001G020100 Sobic010G085100 Sobic010G085100 Sobic008G140200--Sobic010G085100 Sobic004G112100 Sobic004G112100 Sobic008G140200--Sobic004G112100 Sobic002G404800 Sobic002G404800 Sobic008G140200--Sobic002G404800 Sobic004G215800 Sobic004G215800 Sobic008G140200--Sobic004G215800 Sobic006G153400 Sobic006G153400 Sobic008G140200--Sobic006G153400 Sobic009G048900 Sobic009G048900 Sobic008G140200--Sobic009G048900 Sobic001G134100 Sobic001G134100 Sobic008G140200--Sobic001G134100 Sobic009G256100 Sobic009G256100 Sobic008G140200--Sobic009G256100 Sobic010G104800 Sobic010G104800 Sobic008G140200--Sobic010G104800
Octagon: transcription factors


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