Gene annotation
Transcriptome id Sobic.010G027500.1
Synonym PAK, Sb10g002510, ARK3
Functional annotation kinesin motor domain containing protein, expressed
UniProt C5Z3G2
Pfam PF00514 PF00225
Panther DB PTHR24115 PTHR24115:SF533
NCBI CDD KOG0240; Kinesin (SMY1 subfamily)
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0008017microtubule binding GO:0007018microtubule-based movement GO:0005524ATP binding GO:0003777microtubule motor activity GO:0005871kinesin complex


Orthologs (automatic annotation)
TAIR AT1G01950 : armadillo repeat kinesin 2
RAP-DB (Rice) LOC_Os06g04560.1 : kinesin motor domain containing protein, expressed
MaizeGDB (Corn) Zm00025a041440 , Zm00025a050109
Brachypodium KQK19954
Barley HORVU7Hr1G017730.3 , HORVU7Hr1G017730.2 , HORVU7Hr1G017730.1 , HORVU7Hr1G017730.7 , HORVU7Hr1G017730.6 , HORVU7Hr1G017730.5 , HORVU7Hr1G017730.4 , HORVU7Hr1G017730.8
Wheat TraesCS7A02G076600 , TraesCS4A02G375000 , TraesCS7D02G072300 , TraesCS7A02G076600 , TraesCS7A02G076600
Populus PNT49764 , PNT49765


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cDNA sequences
Sobic.010G027500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G374400 -(PubMedID : 23108465)@"DEP2(Ortholog in rice:Li et al., 2010)"(PubMedID : 31659864)@expressed protein -
2 Sobic.007G125700 NHL repeat-containing protein, putative, expressed -
3 Sobic.009G031500 agenet domain containing protein, putative, expressed -
4 Sobic.004G043750 - K16251: DNA-directed RNA polymerase V subunit 1
5 Sobic.008G015200 NAP1, putative, expressed K05750: NCKAP1, NCK-associated protein 1
6 Sobic.007G197100 expressed protein -
7 Sobic.001G540700 expressed protein -
8 Sobic.001G367100 pleckstrin homology domain-containing protein, putative, expressed -
9 Sobic.004G129600 expressed protein -
10 Sobic.002G143200 kinesin motor domain containing protein, putative, expressed K10395: kinesin family member 4
11 Sobic.009G167100 TBC domain containing protein, expressed -
12 Sobic.004G207000 fasciated ear2, putative, expressed -
13 Sobic.002G074000 expressed protein -
14 Sobic.002G098500 H-BTB6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
15 Sobic.009G254000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
16 Sobic.008G088842 - -
17 Sobic.001G395200 cyclin-related protein, putative, expressed -
18 Sobic.003G077500 expressed protein -
19 Sobic.002G148400 histone-lysine N-methyltransferase, H3 lysine-4 specific ATX1, putative, expressed -
20 Sobic.010G275800 callose synthase-like enzyme(PubMedID : 25311645)@1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase


Gene co-expression network
sample Sobic010G027500 Sobic010G027500 Sobic002G374400 Sobic002G374400 Sobic010G027500--Sobic002G374400 Sobic007G125700 Sobic007G125700 Sobic010G027500--Sobic007G125700 Sobic009G031500 Sobic009G031500 Sobic010G027500--Sobic009G031500 Sobic004G043750 Sobic004G043750 Sobic010G027500--Sobic004G043750 Sobic008G015200 Sobic008G015200 Sobic010G027500--Sobic008G015200 Sobic007G197100 Sobic007G197100 Sobic010G027500--Sobic007G197100 Sobic001G540700 Sobic001G540700 Sobic010G027500--Sobic001G540700 Sobic001G367100 Sobic001G367100 Sobic010G027500--Sobic001G367100 Sobic004G129600 Sobic004G129600 Sobic010G027500--Sobic004G129600 Sobic002G374400--Sobic008G015200 Sobic002G074000 Sobic002G074000 Sobic002G374400--Sobic002G074000 Sobic003G197100 Sobic003G197100 Sobic002G374400--Sobic003G197100 Sobic002G320600 Sobic002G320600 Sobic002G374400--Sobic002G320600 Sobic008G192700 Sobic008G192700 Sobic002G374400--Sobic008G192700 Sobic001G349700 Sobic001G349700 Sobic002G374400--Sobic001G349700 Sobic009G167100 Sobic009G167100 Sobic002G374400--Sobic009G167100 Sobic006G179300 Sobic006G179300 Sobic002G374400--Sobic006G179300 Sobic002G143200 Sobic002G143200 Sobic002G374400--Sobic002G143200 Sobic002G430900 Sobic002G430900 Sobic007G125700--Sobic002G430900 Sobic004G207000 Sobic004G207000 Sobic007G125700--Sobic004G207000 Sobic010G149600 Sobic010G149600 Sobic007G125700--Sobic010G149600 Sobic010G269300 Sobic010G269300 Sobic007G125700--Sobic010G269300 Sobic002G219900 Sobic002G219900 Sobic007G125700--Sobic002G219900 Sobic003G077500 Sobic003G077500 Sobic007G125700--Sobic003G077500 Sobic001G395200 Sobic001G395200 Sobic007G125700--Sobic001G395200 Sobic007G125700--Sobic004G043750 Sobic006G280100 Sobic006G280100 Sobic007G125700--Sobic006G280100 Sobic009G031500--Sobic004G207000 Sobic009G031500--Sobic001G540700 Sobic006G126600 Sobic006G126600 Sobic009G031500--Sobic006G126600 Sobic009G031500--Sobic007G125700 Sobic001G487200 Sobic001G487200 Sobic009G031500--Sobic001G487200 Sobic003G274400 Sobic003G274400 Sobic009G031500--Sobic003G274400 Sobic009G031500--Sobic003G077500 Sobic004G206300 Sobic004G206300 Sobic009G031500--Sobic004G206300 Sobic003G027800 Sobic003G027800 Sobic009G031500--Sobic003G027800 Sobic009G190200 Sobic009G190200 Sobic004G043750--Sobic009G190200 Sobic004G043750--Sobic006G280100 Sobic009G259900 Sobic009G259900 Sobic004G043750--Sobic009G259900 Sobic010G236200 Sobic010G236200 Sobic004G043750--Sobic010G236200 Sobic004G043750--Sobic001G395200 Sobic004G111000 Sobic004G111000 Sobic004G043750--Sobic004G111000 Sobic004G043750--Sobic010G269300 Sobic004G043750--Sobic007G125700 Sobic010G233000 Sobic010G233000 Sobic004G043750--Sobic010G233000 Sobic001G385400 Sobic001G385400 Sobic008G015200--Sobic001G385400 Sobic008G015200--Sobic008G192700 Sobic008G015200--Sobic002G374400 Sobic008G015200--Sobic002G074000 Sobic009G052100 Sobic009G052100 Sobic008G015200--Sobic009G052100 Sobic008G015200--Sobic009G167100 Sobic008G015200--Sobic006G179300 Sobic008G015200--Sobic002G143200 Sobic009G049200 Sobic009G049200 Sobic008G015200--Sobic009G049200 Sobic002G366000 Sobic002G366000 Sobic007G197100--Sobic002G366000 Sobic007G197100--Sobic001G540700 Sobic009G254000 Sobic009G254000 Sobic007G197100--Sobic009G254000 Sobic005G032600 Sobic005G032600 Sobic007G197100--Sobic005G032600 Sobic009G005700 Sobic009G005700 Sobic007G197100--Sobic009G005700 Sobic002G315500 Sobic002G315500 Sobic007G197100--Sobic002G315500 Sobic007G197100--Sobic004G207000 Sobic001G470200 Sobic001G470200 Sobic007G197100--Sobic001G470200 Sobic006G272800 Sobic006G272800 Sobic007G197100--Sobic006G272800 Sobic002G284100 Sobic002G284100 Sobic001G540700--Sobic002G284100 Sobic001G540700--Sobic007G197100 Sobic001G540700--Sobic004G207000 Sobic004G267600 Sobic004G267600 Sobic001G540700--Sobic004G267600 Sobic004G315700 Sobic004G315700 Sobic001G540700--Sobic004G315700 Sobic001G540700--Sobic006G272800 Sobic001G540700--Sobic001G487200 Sobic001G369800 Sobic001G369800 Sobic001G540700--Sobic001G369800 Sobic003G345000 Sobic003G345000 Sobic001G540700--Sobic003G345000 Sobic010G279900 Sobic010G279900 Sobic001G367100--Sobic010G279900 Sobic001G315400 Sobic001G315400 Sobic001G367100--Sobic001G315400 Sobic001G245900 Sobic001G245900 Sobic001G367100--Sobic001G245900 Sobic003G023400 Sobic003G023400 Sobic001G367100--Sobic003G023400 Sobic008G080500 Sobic008G080500 Sobic001G367100--Sobic008G080500 Sobic009G151200 Sobic009G151200 Sobic001G367100--Sobic009G151200 Sobic004G128200 Sobic004G128200 Sobic001G367100--Sobic004G128200 Sobic002G079100 Sobic002G079100 Sobic001G367100--Sobic002G079100 Sobic001G367100--Sobic003G077500 Sobic004G212700 Sobic004G212700 Sobic004G129600--Sobic004G212700 Sobic004G129600--Sobic004G206300 Sobic004G129600--Sobic003G274400 Sobic004G129600--Sobic009G031500 Sobic001G335500 Sobic001G335500 Sobic004G129600--Sobic001G335500 Sobic004G129600--Sobic007G125700 Sobic007G153700 Sobic007G153700 Sobic004G129600--Sobic007G153700 Sobic004G129600--Sobic004G043750 Sobic002G017900 Sobic002G017900 Sobic004G129600--Sobic002G017900
Octagon: transcription factors


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