Gene annotation
Transcriptome id Sobic.010G028600.4,Sobic.010G028600.3,Sobic.010G028600.1,Sobic.010G028600.6,Sobic.010G028600.5,Sobic.010G028600.2
Synonym Sb10g002610, CRK23
Functional annotation TKL_IRAK_DUF26-la.5 - DUF26 kinases have homology to DUF26 containing loci, expressed
UniProt A0A1W0VR81 , A0A194YI16 , A0A194YH06 , A0A194YH25 , A0A194YGZ8
Pfam PF01657 PF01657 PF00069 PF01657 PF07714
Panther DB PTHR27002 PTHR27002:SF76
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G23310 : cysteine-rich RLK (RECEPTOR-like protein kinase) 23
RAP-DB (Rice) LOC_Os10g04720.1 : TKL_IRAK_DUF26-la.5 - DUF26 kinases have homology to DUF26 containing loci, expressed
MaizeGDB (Corn) Zm00025a041454 , Zm00025a048287 , Zm00025a003635 , Zm00025a024526
Brachypodium PNT76083 , PNT76082 , PNT76081 , PNT76084 , PNT74974 , PNT74973 , KQJ81933 , KQJ81932 , KQJ81935 , KQJ81934 , KQJ81936 , KQJ81939 , PNT76601 , PNT76602 , PNT76078 , PNT60747 , PNT60746 , PNT60749 , PNT60748
Barley HORVU3Hr1G006790.3 , HORVU3Hr1G006790.1 , HORVU3Hr1G006790.7 , HORVU3Hr1G006790.6 , HORVU3Hr1G006790.5 , HORVU3Hr1G006790.4 , HORVU3Hr1G109350.1 , HORVU3Hr1G109350.3 , HORVU3Hr1G109350.2 , HORVU3Hr1G109350.5 , HORVU3Hr1G109350.4 , HORVU3Hr1G109350.6 , HORVU3Hr1G006790.2 , HORVU2Hr1G044640.10 , HORVU2Hr1G044640.13 , HORVU5Hr1G123550.3 , HORVU5Hr1G123550.2 , HORVU5Hr1G123550.5 , HORVU5Hr1G123550.4 , HORVU5Hr1G123550.7 , HORVU5Hr1G123550.6 , HORVU5Hr1G123550.8 , HORVU5Hr1G123550.1 , HORVU5Hr1G123540.10 , HORVU5Hr1G123540.11 , HORVU5Hr1G123540.12 , HORVU5Hr1G123540.13 , HORVU2Hr1G044640.1 , HORVU2Hr1G044640.4 , HORVU2Hr1G044640.5 , HORVU5Hr1G123540.2 , HORVU5Hr1G123540.6 , HORVU5Hr1G123540.7 , HORVU5Hr1G123540.8 , HORVU5Hr1G123540.9 , HORVU5Hr1G123540.3 , HORVU5Hr1G123540.4 , HORVU5Hr1G123540.5 , HORVU3Hr1G006620.13 , HORVU3Hr1G006620.12 , HORVU3Hr1G006620.11 , HORVU3Hr1G006620.10 , HORVU3Hr1G006620.15 , HORVU3Hr1G006620.14 , HORVU3Hr1G006620.9 , HORVU3Hr1G006620.8 , HORVU3Hr1G006620.3 , HORVU3Hr1G006620.2 , HORVU3Hr1G006620.1 , HORVU3Hr1G006620.7 , HORVU3Hr1G006620.6 , HORVU3Hr1G006620.5 , HORVU3Hr1G006620.4 , HORVU3Hr1G006640.8 , HORVU3Hr1G006640.5 , HORVU3Hr1G006640.4 , HORVU3Hr1G006640.7 , HORVU3Hr1G006640.6 , HORVU3Hr1G006640.1 , HORVU3Hr1G006640.3 , HORVU3Hr1G006640.2
Wheat TraesCSU02G010800 , TraesCS3B02G043600 , TraesCS3B02G043600 , TraesCS3A02G039400 , TraesCS3A02G039100 , TraesCS7D02G079100 , TraesCS7D02G029300 , TraesCS3A02G039500 , TraesCS2B02G242100 , TraesCS2B02G242100 , TraesCS2B02G242100 , TraesCS6A02G294700 , TraesCS4A02G456900 , TraesCS4A02G323400 , TraesCS5D02G554000 , TraesCS3B02G044200 , TraesCS2A02G215900 , TraesCS3B02G044300 , TraesCS2A02G485100 , TraesCS7A02G032600 , TraesCS4A02G457000 , TraesCS3B02G044100 , TraesCS6A02G294600 , TraesCSU02G207400 , TraesCS7D02G029200 , TraesCS3A02G039300 , TraesCSU02G011500 , TraesCS7A02G044500 , TraesCS6A02G294500 , TraesCS3A02G039200 , TraesCS1D02G330400 , TraesCS5B02G555000 , TraesCS7A02G032700 , TraesCS3D02G040800 , TraesCS3D02G040800 , TraesCS3D02G040600 , TraesCS7A02G105100 , TraesCS7D02G099300 , TraesCS2A02G485100 , TraesCS2A02G485100 , TraesCS2A02G216700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G213700 -(PubMedID : 26976818)@aminotransferase, putative, expressed K00830: alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase
2 Sobic.003G221800 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
3 Sobic.006G135100 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
4 Sobic.001G511000 peptide transporter PTR3-A, putative, expressed -
5 Sobic.004G065650 - -
6 Sobic.007G204900 extracellular ligand-gated ion channel, putative, expressed -
7 Sobic.002G291700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.001G118100 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
9 Sobic.005G012200 STE_PAK_Ste20_Slob_Wnk.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08867: WNK, WNK lysine deficient protein kinase
10 Sobic.010G096300 -(PubMedID : 22968911)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GLK genes are members of the GARP superfamily and functions in a BS or M cell-type specific manner to regulate the proplastid to chloroplast transition(PubMedID : 22968911)@myb-like DNA-binding domain containing protein, expressed -
11 Sobic.001G158900 helix-loop-helix DNA-binding domain containing protein, expressed K16189: phytochrome-interacting factor 4
12 Sobic.010G225600 - -
13 Sobic.001G102300 homeobox domain containing protein, expressed -
14 Sobic.001G065600 -(PubMedID : 26976818)@hydroxyacid oxidase 1, putative, expressed K11517: (S)-2-hydroxy-acid oxidase
15 Sobic.005G036600 calmodulin-binding protein, putative, expressed -
16 Sobic.001G068301 - K16189: phytochrome-interacting factor 4
17 Sobic.002G104000 - -
18 Sobic.005G055900 expressed protein -
19 Sobic.010G052500 ZOS6-01 - C2H2 zinc finger protein, expressed -
20 Sobic.010G214000 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -


Gene co-expression network
sample Sobic010G028600 Sobic010G028600 Sobic007G213700 Sobic007G213700 Sobic010G028600--Sobic007G213700 Sobic003G221800 Sobic003G221800 Sobic010G028600--Sobic003G221800 Sobic006G135100 Sobic006G135100 Sobic010G028600--Sobic006G135100 Sobic001G511000 Sobic001G511000 Sobic010G028600--Sobic001G511000 Sobic004G065650 Sobic004G065650 Sobic010G028600--Sobic004G065650 Sobic007G204900 Sobic007G204900 Sobic010G028600--Sobic007G204900 Sobic002G291700 Sobic002G291700 Sobic010G028600--Sobic002G291700 Sobic001G118100 Sobic001G118100 Sobic010G028600--Sobic001G118100 Sobic005G012200 Sobic005G012200 Sobic010G028600--Sobic005G012200 Sobic007G213700--Sobic007G204900 Sobic002G000700 Sobic002G000700 Sobic007G213700--Sobic002G000700 Sobic003G305000 Sobic003G305000 Sobic007G213700--Sobic003G305000 Sobic004G201700 Sobic004G201700 Sobic007G213700--Sobic004G201700 Sobic006G249050 Sobic006G249050 Sobic007G213700--Sobic006G249050 Sobic004G122200 Sobic004G122200 Sobic007G213700--Sobic004G122200 Sobic001G003200 Sobic001G003200 Sobic007G213700--Sobic001G003200 Sobic007G213700--Sobic006G135100 Sobic001G158900 Sobic001G158900 Sobic007G213700--Sobic001G158900 Sobic003G308700 Sobic003G308700 Sobic003G221800--Sobic003G308700 Sobic003G386600 Sobic003G386600 Sobic003G221800--Sobic003G386600 Sobic006G258500 Sobic006G258500 Sobic003G221800--Sobic006G258500 Sobic001G421300 Sobic001G421300 Sobic003G221800--Sobic001G421300 Sobic001G284800 Sobic001G284800 Sobic003G221800--Sobic001G284800 Sobic002G140700 Sobic002G140700 Sobic003G221800--Sobic002G140700 Sobic001G253700 Sobic001G253700 Sobic003G221800--Sobic001G253700 Sobic009G008100 Sobic009G008100 Sobic003G221800--Sobic009G008100 Sobic007G134600 Sobic007G134600 Sobic003G221800--Sobic007G134600 Sobic010G214000 Sobic010G214000 Sobic006G135100--Sobic010G214000 Sobic005G015200 Sobic005G015200 Sobic006G135100--Sobic005G015200 Sobic008G015100 Sobic008G015100 Sobic006G135100--Sobic008G015100 Sobic005G097800 Sobic005G097800 Sobic006G135100--Sobic005G097800 Sobic010G225600 Sobic010G225600 Sobic006G135100--Sobic010G225600 Sobic010G096300 Sobic010G096300 Sobic006G135100--Sobic010G096300 Sobic003G088800 Sobic003G088800 Sobic006G135100--Sobic003G088800 Sobic009G202400 Sobic009G202400 Sobic006G135100--Sobic009G202400 Sobic005G055900 Sobic005G055900 Sobic006G135100--Sobic005G055900 Sobic004G096300 Sobic004G096300 Sobic001G511000--Sobic004G096300 Sobic010G280100 Sobic010G280100 Sobic001G511000--Sobic010G280100 Sobic002G226000 Sobic002G226000 Sobic001G511000--Sobic002G226000 Sobic007G054100 Sobic007G054100 Sobic001G511000--Sobic007G054100 Sobic003G074500 Sobic003G074500 Sobic001G511000--Sobic003G074500 Sobic009G198900 Sobic009G198900 Sobic001G511000--Sobic009G198900 Sobic001G053900 Sobic001G053900 Sobic001G511000--Sobic001G053900 Sobic004G291800 Sobic004G291800 Sobic001G511000--Sobic004G291800 Sobic003G324000 Sobic003G324000 Sobic001G511000--Sobic003G324000 Sobic004G188400 Sobic004G188400 Sobic004G065650--Sobic004G188400 Sobic005G110472 Sobic005G110472 Sobic004G065650--Sobic005G110472 Sobic007G037900 Sobic007G037900 Sobic004G065650--Sobic007G037900 Sobic006G088580 Sobic006G088580 Sobic004G065650--Sobic006G088580 Sobic009G140500 Sobic009G140500 Sobic004G065650--Sobic009G140500 Sobic008G013600 Sobic008G013600 Sobic004G065650--Sobic008G013600 Sobic010G124001 Sobic010G124001 Sobic004G065650--Sobic010G124001 Sobic006G137400 Sobic006G137400 Sobic004G065650--Sobic006G137400 Sobic001G067850 Sobic001G067850 Sobic004G065650--Sobic001G067850 Sobic004G001300 Sobic004G001300 Sobic007G204900--Sobic004G001300 Sobic007G204900--Sobic007G213700 Sobic008G011200 Sobic008G011200 Sobic007G204900--Sobic008G011200 Sobic007G204900--Sobic003G305000 Sobic007G204900--Sobic010G096300 Sobic003G068800 Sobic003G068800 Sobic007G204900--Sobic003G068800 Sobic007G204900--Sobic006G249050 Sobic001G065600 Sobic001G065600 Sobic007G204900--Sobic001G065600 Sobic001G098301 Sobic001G098301 Sobic007G204900--Sobic001G098301 Sobic004G208400 Sobic004G208400 Sobic002G291700--Sobic004G208400 Sobic006G173000 Sobic006G173000 Sobic002G291700--Sobic006G173000 Sobic002G291700--Sobic004G188400 Sobic002G291700--Sobic004G065650 Sobic002G203200 Sobic002G203200 Sobic002G291700--Sobic002G203200 Sobic002G291700--Sobic006G137400 Sobic002G291700--Sobic001G118100 Sobic006G225200 Sobic006G225200 Sobic002G291700--Sobic006G225200 Sobic002G291700--Sobic005G110472 Sobic001G118100--Sobic004G001300 Sobic001G118100--Sobic006G225200 Sobic005G036600 Sobic005G036600 Sobic001G118100--Sobic005G036600 Sobic001G118100--Sobic009G140500 Sobic004G113800 Sobic004G113800 Sobic001G118100--Sobic004G113800 Sobic001G484800 Sobic001G484800 Sobic001G118100--Sobic001G484800 Sobic001G118100--Sobic002G291700 Sobic007G052900 Sobic007G052900 Sobic001G118100--Sobic007G052900 Sobic001G118100--Sobic004G065650 Sobic003G007700 Sobic003G007700 Sobic005G012200--Sobic003G007700 Sobic003G263001 Sobic003G263001 Sobic005G012200--Sobic003G263001 Sobic003G162100 Sobic003G162100 Sobic005G012200--Sobic003G162100 Sobic001G500800 Sobic001G500800 Sobic005G012200--Sobic001G500800 Sobic001G381200 Sobic001G381200 Sobic005G012200--Sobic001G381200 Sobic003G002600 Sobic003G002600 Sobic005G012200--Sobic003G002600 Sobic002G200700 Sobic002G200700 Sobic005G012200--Sobic002G200700 Sobic001G351400 Sobic001G351400 Sobic005G012200--Sobic001G351400 Sobic005G188600 Sobic005G188600 Sobic005G012200--Sobic005G188600
Octagon: transcription factors


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