Gene annotation
Transcriptome id Sobic.010G038600.1,Sobic.010G038600.4,Sobic.010G038600.5,Sobic.010G038600.3,Sobic.010G038600.2,Sobic.010G038600.6
Synonym Sb10g003430
Functional annotation expressed protein
UniProt C5Z4A1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G60310 : -
RAP-DB (Rice) LOC_Os06g05640.1 : expressed protein
MaizeGDB (Corn) Zm00025a050030
Brachypodium PNT76637 , PNT76638 , KQK19859 , PNT76636
Barley -
Wheat TraesCS4A02G399200 , TraesCS3D02G431600 , TraesCS7D02G095000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G056500 integrator complex subunit 3, putative, expressed K13140: integrator complex subunit 3
2 Sobic.003G326500 apurinic endonuclease-redox protein, putative, expressed K01142: E3.1.11.2, exodeoxyribonuclease III
3 Sobic.003G050700 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
4 Sobic.003G223300 chitinase domain-containing protein 1 precursor, putative, expressed K17525: chitinase domain-containing protein 1
5 Sobic.005G008600 double-stranded RNA binding motif containing protein, expressed -
6 Sobic.001G503200 ZOS3-01 - C2H2 zinc finger protein, expressed -
7 Sobic.001G098100 cyclin, putative, expressed K06634: cyclin H
8 Sobic.003G183466 - -
9 Sobic.002G236500 OsPOP19 - Putative Prolyl Oligopeptidase homologue, expressed -
10 Sobic.001G051400 aminoacyl-tRNA synthetase, putative, expressed -
11 Sobic.005G087300 protein kinase family protein, putative, expressed -
12 Sobic.004G278900 regulatory protein, putative, expressed -
13 Sobic.001G485500 - -
14 Sobic.002G336400 OsFBLD4 - F-box, LRR and FBD domain containing protein, expressed -
15 Sobic.005G102350 - -
16 Sobic.009G178500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@LTPL67 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.006G119900 zinc finger, ZZ type family protein, expressed K17987: next to BRCA1 gene 1 protein
18 Sobic.009G038600 GA20663-PA, putative, expressed -
19 Sobic.007G096800 UAA transporter family domain containing protein, expressed K15272: solute carrier family 35 (UDP-sugar transporter), member A1/2/3
20 Sobic.003G071901 - -


Gene co-expression network
sample Sobic010G038600 Sobic010G038600 Sobic005G056500 Sobic005G056500 Sobic010G038600--Sobic005G056500 Sobic003G326500 Sobic003G326500 Sobic010G038600--Sobic003G326500 Sobic003G050700 Sobic003G050700 Sobic010G038600--Sobic003G050700 Sobic003G223300 Sobic003G223300 Sobic010G038600--Sobic003G223300 Sobic005G008600 Sobic005G008600 Sobic010G038600--Sobic005G008600 Sobic001G503200 Sobic001G503200 Sobic010G038600--Sobic001G503200 Sobic001G098100 Sobic001G098100 Sobic010G038600--Sobic001G098100 Sobic003G183466 Sobic003G183466 Sobic010G038600--Sobic003G183466 Sobic002G236500 Sobic002G236500 Sobic010G038600--Sobic002G236500 Sobic005G056500--Sobic001G098100 Sobic005G056500--Sobic010G038600 Sobic005G040500 Sobic005G040500 Sobic005G056500--Sobic005G040500 Sobic008G038400 Sobic008G038400 Sobic005G056500--Sobic008G038400 Sobic005G056500--Sobic003G223300 Sobic003G151200 Sobic003G151200 Sobic005G056500--Sobic003G151200 Sobic005G056500--Sobic003G050700 Sobic004G330000 Sobic004G330000 Sobic005G056500--Sobic004G330000 Sobic005G150600 Sobic005G150600 Sobic005G056500--Sobic005G150600 Sobic003G326500--Sobic003G183466 Sobic009G178500 Sobic009G178500 Sobic003G326500--Sobic009G178500 Sobic002G095300 Sobic002G095300 Sobic003G326500--Sobic002G095300 Sobic008G141900 Sobic008G141900 Sobic003G326500--Sobic008G141900 Sobic007G082000 Sobic007G082000 Sobic003G326500--Sobic007G082000 Sobic002G383700 Sobic002G383700 Sobic003G326500--Sobic002G383700 Sobic004G291200 Sobic004G291200 Sobic003G326500--Sobic004G291200 Sobic002G286632 Sobic002G286632 Sobic003G326500--Sobic002G286632 Sobic003G045450 Sobic003G045450 Sobic003G326500--Sobic003G045450 Sobic005G160200 Sobic005G160200 Sobic003G050700--Sobic005G160200 Sobic003G411700 Sobic003G411700 Sobic003G050700--Sobic003G411700 Sobic007G221700 Sobic007G221700 Sobic003G050700--Sobic007G221700 Sobic010G222800 Sobic010G222800 Sobic003G050700--Sobic010G222800 Sobic007G096800 Sobic007G096800 Sobic003G050700--Sobic007G096800 Sobic004G278900 Sobic004G278900 Sobic003G050700--Sobic004G278900 Sobic003G343200 Sobic003G343200 Sobic003G050700--Sobic003G343200 Sobic006G184200 Sobic006G184200 Sobic003G050700--Sobic006G184200 Sobic010G187900 Sobic010G187900 Sobic003G050700--Sobic010G187900 Sobic005G228600 Sobic005G228600 Sobic003G223300--Sobic005G228600 Sobic003G223300--Sobic010G038600 Sobic002G190400 Sobic002G190400 Sobic003G223300--Sobic002G190400 Sobic003G223300--Sobic005G056500 Sobic004G070100 Sobic004G070100 Sobic003G223300--Sobic004G070100 Sobic003G223300--Sobic003G050700 Sobic005G156450 Sobic005G156450 Sobic003G223300--Sobic005G156450 Sobic003G223300--Sobic001G098100 Sobic010G249900 Sobic010G249900 Sobic003G223300--Sobic010G249900 Sobic005G008600--Sobic002G236500 Sobic002G237800 Sobic002G237800 Sobic005G008600--Sobic002G237800 Sobic003G388000 Sobic003G388000 Sobic005G008600--Sobic003G388000 Sobic010G089800 Sobic010G089800 Sobic005G008600--Sobic010G089800 Sobic002G340200 Sobic002G340200 Sobic005G008600--Sobic002G340200 Sobic003G433200 Sobic003G433200 Sobic005G008600--Sobic003G433200 Sobic004G267900 Sobic004G267900 Sobic005G008600--Sobic004G267900 Sobic007G075800 Sobic007G075800 Sobic005G008600--Sobic007G075800 Sobic001G340000 Sobic001G340000 Sobic005G008600--Sobic001G340000 Sobic002G031500 Sobic002G031500 Sobic001G503200--Sobic002G031500 Sobic003G188600 Sobic003G188600 Sobic001G503200--Sobic003G188600 Sobic003G272700 Sobic003G272700 Sobic001G503200--Sobic003G272700 Sobic003G360300 Sobic003G360300 Sobic001G503200--Sobic003G360300 Sobic003G032600 Sobic003G032600 Sobic001G503200--Sobic003G032600 Sobic001G191900 Sobic001G191900 Sobic001G503200--Sobic001G191900 Sobic002G076100 Sobic002G076100 Sobic001G503200--Sobic002G076100 Sobic004G356200 Sobic004G356200 Sobic001G503200--Sobic004G356200 Sobic001G503200--Sobic003G050700 Sobic006G138600 Sobic006G138600 Sobic001G098100--Sobic006G138600 Sobic001G098100--Sobic005G056500 Sobic001G176700 Sobic001G176700 Sobic001G098100--Sobic001G176700 Sobic006G027200 Sobic006G027200 Sobic001G098100--Sobic006G027200 Sobic001G098100--Sobic010G038600 Sobic007G118400 Sobic007G118400 Sobic001G098100--Sobic007G118400 Sobic001G098100--Sobic005G040500 Sobic001G098100--Sobic003G223300 Sobic010G125700 Sobic010G125700 Sobic001G098100--Sobic010G125700 Sobic003G183466--Sobic003G326500 Sobic010G143600 Sobic010G143600 Sobic003G183466--Sobic010G143600 Sobic002G173400 Sobic002G173400 Sobic003G183466--Sobic002G173400 Sobic003G129500 Sobic003G129500 Sobic003G183466--Sobic003G129500 Sobic003G183466--Sobic004G278900 Sobic009G120400 Sobic009G120400 Sobic003G183466--Sobic009G120400 Sobic003G183466--Sobic002G095300 Sobic003G183466--Sobic002G286632 Sobic008G046200 Sobic008G046200 Sobic003G183466--Sobic008G046200 Sobic002G236500--Sobic003G388000 Sobic002G128101 Sobic002G128101 Sobic002G236500--Sobic002G128101 Sobic003G396700 Sobic003G396700 Sobic002G236500--Sobic003G396700 Sobic002G236500--Sobic002G237800 Sobic001G200200 Sobic001G200200 Sobic002G236500--Sobic001G200200 Sobic001G273000 Sobic001G273000 Sobic002G236500--Sobic001G273000 Sobic002G236500--Sobic005G008600 Sobic004G030400 Sobic004G030400 Sobic002G236500--Sobic004G030400 Sobic002G236500--Sobic005G150600
Octagon: transcription factors


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