Gene annotation
Transcriptome id Sobic.010G079850.1
Synonym -
Functional annotation -
UniProt A0A1W0VRX7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G367900 LSM domain containing protein, expressed K12622: U6 snRNA-associated Sm-like protein LSm3
2 Sobic.002G071000 - K11594: DDX3X, ATP-dependent RNA helicase DDX3X
3 Sobic.001G404100 expressed protein K03237: translation initiation factor 2 subunit 1
4 Sobic.003G117300 LSM domain containing protein, expressed K12623: U6 snRNA-associated Sm-like protein LSm4
5 Sobic.003G190800 GA18326-PA, putative, expressed -
6 Sobic.009G104000 ranBP1 domain containing protein, expressed K15306: Ran-binding protein 1
7 Sobic.004G225300 e2f-associated phosphoprotein, putative, expressed -
8 Sobic.006G179800 HMG1/2, putative, expressed -
9 Sobic.001G315500 ethylene-responsive element-binding protein, putative, expressed -
10 Sobic.009G050200 expressed protein K15141: mediator of RNA polymerase II transcription subunit 28
11 Sobic.009G130400 DNA-directed RNA polymerase II subunit RPB7, putative, expressed K03015: RPB7, DNA-directed RNA polymerase II subunit RPB7
12 Sobic.006G049700 SAM domain family protein, expressed -
13 Sobic.002G262000 ankyrin repeat domain containing protein, putative, expressed -
14 Sobic.001G110400 - -
15 Sobic.001G502200 peptidase, T1 family, putative, expressed K02729: 20S proteasome subunit alpha 5
16 Sobic.004G348900 expressed protein -
17 Sobic.002G371200 LSM domain containing protein, expressed K11099: SNRPG, small nuclear ribonucleoprotein G
18 Sobic.001G132900 expressed protein -
19 Sobic.001G428100 S-RNase-binding protein, putative, expressed K19042: E3 ubiquitin-protein ligase BOI and related proteins
20 Sobic.004G175700 tetratricopeptide repeat domain containing protein, expressed -


Gene co-expression network
sample Sobic010G079850 Sobic010G079850 Sobic003G367900 Sobic003G367900 Sobic010G079850--Sobic003G367900 Sobic002G071000 Sobic002G071000 Sobic010G079850--Sobic002G071000 Sobic001G404100 Sobic001G404100 Sobic010G079850--Sobic001G404100 Sobic003G117300 Sobic003G117300 Sobic010G079850--Sobic003G117300 Sobic003G190800 Sobic003G190800 Sobic010G079850--Sobic003G190800 Sobic009G104000 Sobic009G104000 Sobic010G079850--Sobic009G104000 Sobic004G225300 Sobic004G225300 Sobic010G079850--Sobic004G225300 Sobic006G179800 Sobic006G179800 Sobic010G079850--Sobic006G179800 Sobic001G315500 Sobic001G315500 Sobic010G079850--Sobic001G315500 Sobic003G367900--Sobic001G404100 Sobic006G052400 Sobic006G052400 Sobic003G367900--Sobic006G052400 Sobic001G096100 Sobic001G096100 Sobic003G367900--Sobic001G096100 Sobic006G281200 Sobic006G281200 Sobic003G367900--Sobic006G281200 Sobic003G127700 Sobic003G127700 Sobic003G367900--Sobic003G127700 Sobic002G331300 Sobic002G331300 Sobic003G367900--Sobic002G331300 Sobic004G175700 Sobic004G175700 Sobic003G367900--Sobic004G175700 Sobic009G258600 Sobic009G258600 Sobic003G367900--Sobic009G258600 Sobic008G100000 Sobic008G100000 Sobic003G367900--Sobic008G100000 Sobic007G079300 Sobic007G079300 Sobic002G071000--Sobic007G079300 Sobic001G234200 Sobic001G234200 Sobic002G071000--Sobic001G234200 Sobic004G348900 Sobic004G348900 Sobic002G071000--Sobic004G348900 Sobic006G010000 Sobic006G010000 Sobic002G071000--Sobic006G010000 Sobic009G249100 Sobic009G249100 Sobic002G071000--Sobic009G249100 Sobic003G293300 Sobic003G293300 Sobic002G071000--Sobic003G293300 Sobic002G071000--Sobic003G117300 Sobic004G082900 Sobic004G082900 Sobic002G071000--Sobic004G082900 Sobic006G049700 Sobic006G049700 Sobic002G071000--Sobic006G049700 Sobic002G341800 Sobic002G341800 Sobic001G404100--Sobic002G341800 Sobic001G481700 Sobic001G481700 Sobic001G404100--Sobic001G481700 Sobic001G502200 Sobic001G502200 Sobic001G404100--Sobic001G502200 Sobic008G137600 Sobic008G137600 Sobic001G404100--Sobic008G137600 Sobic001G404100--Sobic009G104000 Sobic001G404100--Sobic001G096100 Sobic002G428200 Sobic002G428200 Sobic001G404100--Sobic002G428200 Sobic009G212300 Sobic009G212300 Sobic001G404100--Sobic009G212300 Sobic006G252200 Sobic006G252200 Sobic001G404100--Sobic006G252200 Sobic004G060600 Sobic004G060600 Sobic003G117300--Sobic004G060600 Sobic001G428100 Sobic001G428100 Sobic003G117300--Sobic001G428100 Sobic003G117300--Sobic002G071000 Sobic003G117300--Sobic001G404100 Sobic002G262000 Sobic002G262000 Sobic003G117300--Sobic002G262000 Sobic001G501200 Sobic001G501200 Sobic003G117300--Sobic001G501200 Sobic009G130400 Sobic009G130400 Sobic003G117300--Sobic009G130400 Sobic003G117300--Sobic006G281200 Sobic003G077900 Sobic003G077900 Sobic003G117300--Sobic003G077900 Sobic006G079900 Sobic006G079900 Sobic003G190800--Sobic006G079900 Sobic009G124400 Sobic009G124400 Sobic003G190800--Sobic009G124400 Sobic003G190800--Sobic009G258600 Sobic003G190800--Sobic003G367900 Sobic002G279000 Sobic002G279000 Sobic003G190800--Sobic002G279000 Sobic005G206700 Sobic005G206700 Sobic003G190800--Sobic005G206700 Sobic006G231700 Sobic006G231700 Sobic003G190800--Sobic006G231700 Sobic004G137900 Sobic004G137900 Sobic003G190800--Sobic004G137900 Sobic001G199300 Sobic001G199300 Sobic003G190800--Sobic001G199300 Sobic009G104000--Sobic001G404100 Sobic010G008100 Sobic010G008100 Sobic009G104000--Sobic010G008100 Sobic010G038700 Sobic010G038700 Sobic009G104000--Sobic010G038700 Sobic001G440700 Sobic001G440700 Sobic009G104000--Sobic001G440700 Sobic009G104000--Sobic001G502200 Sobic007G132700 Sobic007G132700 Sobic009G104000--Sobic007G132700 Sobic001G067900 Sobic001G067900 Sobic009G104000--Sobic001G067900 Sobic010G062800 Sobic010G062800 Sobic009G104000--Sobic010G062800 Sobic009G179200 Sobic009G179200 Sobic009G104000--Sobic009G179200 Sobic004G027000 Sobic004G027000 Sobic004G225300--Sobic004G027000 Sobic001G422700 Sobic001G422700 Sobic004G225300--Sobic001G422700 Sobic002G394800 Sobic002G394800 Sobic004G225300--Sobic002G394800 Sobic004G206300 Sobic004G206300 Sobic004G225300--Sobic004G206300 Sobic009G056300 Sobic009G056300 Sobic004G225300--Sobic009G056300 Sobic004G212700 Sobic004G212700 Sobic004G225300--Sobic004G212700 Sobic002G139000 Sobic002G139000 Sobic004G225300--Sobic002G139000 Sobic006G252100 Sobic006G252100 Sobic004G225300--Sobic006G252100 Sobic004G225300--Sobic006G179800 Sobic006G179800--Sobic004G212700 Sobic002G113900 Sobic002G113900 Sobic006G179800--Sobic002G113900 Sobic001G459100 Sobic001G459100 Sobic006G179800--Sobic001G459100 Sobic004G226800 Sobic004G226800 Sobic006G179800--Sobic004G226800 Sobic006G179800--Sobic002G262000 Sobic001G329300 Sobic001G329300 Sobic006G179800--Sobic001G329300 Sobic006G179800--Sobic004G225300 Sobic006G270900 Sobic006G270900 Sobic006G179800--Sobic006G270900 Sobic003G278300 Sobic003G278300 Sobic006G179800--Sobic003G278300 Sobic001G315500--Sobic001G502200 Sobic003G124800 Sobic003G124800 Sobic001G315500--Sobic003G124800 Sobic010G065400 Sobic010G065400 Sobic001G315500--Sobic010G065400 Sobic001G315500--Sobic008G137600 Sobic004G224900 Sobic004G224900 Sobic001G315500--Sobic004G224900 Sobic001G315500--Sobic002G428200 Sobic001G315500--Sobic006G252200 Sobic003G330500 Sobic003G330500 Sobic001G315500--Sobic003G330500 Sobic003G362400 Sobic003G362400 Sobic001G315500--Sobic003G362400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.