Gene annotation
Transcriptome id Sobic.010G091300.3,Sobic.010G091300.1,Sobic.010G091300.2
Synonym Sb10g007940, NTMC2TYPE6.1, NTMC2T6.1
Functional annotation C2 domain containing protein, putative, expressed
UniProt A0A1W0VS36 , A0A1W0VS65
Pfam PF00168
Panther DB PTHR10774 PTHR10774:SF84
NCBI CDD KOG1030; Predicted Ca2+-dependent phospholipid-binding protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G53590 : Calcium-dependent lipid-binding (CaLB domain) family protein
RAP-DB (Rice) LOC_Os02g20970.1 : C2 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a034314
Brachypodium KQJ94538
Barley HORVU2Hr1G025580.14 , HORVU2Hr1G025580.15 , HORVU2Hr1G025580.12 , HORVU2Hr1G025580.13 , HORVU2Hr1G025580.10 , HORVU2Hr1G025580.11 , HORVU2Hr1G025580.8 , HORVU2Hr1G025580.9 , HORVU2Hr1G025580.4 , HORVU2Hr1G025580.6 , HORVU2Hr1G025580.7 , HORVU2Hr1G025580.1 , HORVU2Hr1G025580.2 , HORVU2Hr1G025580.3
Wheat TraesCS2D02G148300 , TraesCS2B02G169300 , TraesCS2A02G144400
Populus -


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cDNA sequences
Sobic.010G091300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G245500 down-regulated TF in developmental senescence(PubMedID : 27586543)@AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
2 Sobic.009G043500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sulfite oxidase, putative, expressed K00387: sulfite oxidase
3 Sobic.002G332200 proteasome inhibitor-related, putative, expressed K06700: proteasome inhibitor subunit 1 (PI31)
4 Sobic.001G205800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lanC-like protein 2, putative, expressed -
5 Sobic.001G486000 tentative name(PubMedID : 31536532)@nuclear transcription factor Y subunit, putative, expressed K08064: NFYA, nuclear transcription factor Y, alpha
6 Sobic.004G166500 N-carbamoylputrescine amidohydrolase(PubMedID : 27325899)@Up-regulated by silicon application under drought stress(PubMedID : 24813726)@N-carbamoylputrescine amidase, putative, expressed K12251: N-carbamoylputrescine amidase
7 Sobic.001G340200 nuclear transcription factor Y subunit, putative, expressed K08064: NFYA, nuclear transcription factor Y, alpha
8 Sobic.009G117900 OsFBX167 - F-box domain containing protein, expressed -
9 Sobic.009G052600 universal stress protein domain containing protein, putative, expressed -
10 Sobic.008G034300 expressed protein -
11 Sobic.004G297300 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05609: UCHL3, ubiquitin carboxyl-terminal hydrolase L3
12 Sobic.009G204601 - K00850: pfkA, 6-phosphofructokinase 1
13 Sobic.006G251500 inositol 1,3,4,5,6-pentakisphosphate 2-kinase, putative, expressed K10572: inositol-pentakisphosphate 2-kinase
14 Sobic.002G159900 -(PubMedID : 26976818)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
15 Sobic.001G383100 metallo-beta-lactamase family protein, putative, expressed K01069: gloB, gloC, hydroxyacylglutathione hydrolase
16 Sobic.003G126800 cysteine proteinase inhibitor precursor protein, putative, expressed -
17 Sobic.003G408300 WD domain, G-beta repeat domain containing protein, expressed K14791: periodic tryptophan protein 1
18 Sobic.004G066500 chaperone protein clpB 1, putative, expressed K03695: ATP-dependent Clp protease ATP-binding subunit ClpB
19 Sobic.008G170500 AGC_PVPK_like_kin82y.20 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
20 Sobic.001G397000 argininosuccinate lyase, putative, expressed K01755: argH, argininosuccinate lyase


Gene co-expression network
sample Sobic010G091300 Sobic010G091300 Sobic006G245500 Sobic006G245500 Sobic010G091300--Sobic006G245500 Sobic009G043500 Sobic009G043500 Sobic010G091300--Sobic009G043500 Sobic002G332200 Sobic002G332200 Sobic010G091300--Sobic002G332200 Sobic001G205800 Sobic001G205800 Sobic010G091300--Sobic001G205800 Sobic001G486000 Sobic001G486000 Sobic010G091300--Sobic001G486000 Sobic004G166500 Sobic004G166500 Sobic010G091300--Sobic004G166500 Sobic001G340200 Sobic001G340200 Sobic010G091300--Sobic001G340200 Sobic009G117900 Sobic009G117900 Sobic010G091300--Sobic009G117900 Sobic009G052600 Sobic009G052600 Sobic010G091300--Sobic009G052600 Sobic008G170500 Sobic008G170500 Sobic006G245500--Sobic008G170500 Sobic003G128700 Sobic003G128700 Sobic006G245500--Sobic003G128700 Sobic003G300900 Sobic003G300900 Sobic006G245500--Sobic003G300900 Sobic008G034300 Sobic008G034300 Sobic006G245500--Sobic008G034300 Sobic010G090100 Sobic010G090100 Sobic006G245500--Sobic010G090100 Sobic006G245500--Sobic001G205800 Sobic001G397100 Sobic001G397100 Sobic006G245500--Sobic001G397100 Sobic008G135500 Sobic008G135500 Sobic006G245500--Sobic008G135500 Sobic001G197800 Sobic001G197800 Sobic006G245500--Sobic001G197800 Sobic002G186900 Sobic002G186900 Sobic009G043500--Sobic002G186900 Sobic002G159900 Sobic002G159900 Sobic009G043500--Sobic002G159900 Sobic003G306900 Sobic003G306900 Sobic009G043500--Sobic003G306900 Sobic003G326800 Sobic003G326800 Sobic009G043500--Sobic003G326800 Sobic009G043500--Sobic010G091300 Sobic006G220500 Sobic006G220500 Sobic009G043500--Sobic006G220500 Sobic001G397000 Sobic001G397000 Sobic009G043500--Sobic001G397000 Sobic003G312400 Sobic003G312400 Sobic009G043500--Sobic003G312400 Sobic004G033500 Sobic004G033500 Sobic009G043500--Sobic004G033500 Sobic003G295700 Sobic003G295700 Sobic002G332200--Sobic003G295700 Sobic003G408300 Sobic003G408300 Sobic002G332200--Sobic003G408300 Sobic009G169200 Sobic009G169200 Sobic002G332200--Sobic009G169200 Sobic002G116500 Sobic002G116500 Sobic002G332200--Sobic002G116500 Sobic004G033200 Sobic004G033200 Sobic002G332200--Sobic004G033200 Sobic009G028100 Sobic009G028100 Sobic002G332200--Sobic009G028100 Sobic008G116600 Sobic008G116600 Sobic002G332200--Sobic008G116600 Sobic003G121800 Sobic003G121800 Sobic002G332200--Sobic003G121800 Sobic001G460100 Sobic001G460100 Sobic002G332200--Sobic001G460100 Sobic001G205800--Sobic008G170500 Sobic001G385900 Sobic001G385900 Sobic001G205800--Sobic001G385900 Sobic001G205800--Sobic008G034300 Sobic001G205800--Sobic006G245500 Sobic010G221800 Sobic010G221800 Sobic001G205800--Sobic010G221800 Sobic010G164400 Sobic010G164400 Sobic001G205800--Sobic010G164400 Sobic001G205800--Sobic003G128700 Sobic003G386800 Sobic003G386800 Sobic001G205800--Sobic003G386800 Sobic001G205800--Sobic003G300900 Sobic006G251500 Sobic006G251500 Sobic001G486000--Sobic006G251500 Sobic001G486000--Sobic001G340200 Sobic008G080000 Sobic008G080000 Sobic001G486000--Sobic008G080000 Sobic001G486000--Sobic009G052600 Sobic001G486000--Sobic010G091300 Sobic001G486000--Sobic003G408300 Sobic009G108700 Sobic009G108700 Sobic001G486000--Sobic009G108700 Sobic004G066500 Sobic004G066500 Sobic001G486000--Sobic004G066500 Sobic001G454000 Sobic001G454000 Sobic001G486000--Sobic001G454000 Sobic003G358300 Sobic003G358300 Sobic004G166500--Sobic003G358300 Sobic001G201100 Sobic001G201100 Sobic004G166500--Sobic001G201100 Sobic001G066700 Sobic001G066700 Sobic004G166500--Sobic001G066700 Sobic003G368700 Sobic003G368700 Sobic004G166500--Sobic003G368700 Sobic008G130400 Sobic008G130400 Sobic004G166500--Sobic008G130400 Sobic002G218000 Sobic002G218000 Sobic004G166500--Sobic002G218000 Sobic006G239300 Sobic006G239300 Sobic004G166500--Sobic006G239300 Sobic001G505500 Sobic001G505500 Sobic004G166500--Sobic001G505500 Sobic009G070200 Sobic009G070200 Sobic004G166500--Sobic009G070200 Sobic001G340200--Sobic001G486000 Sobic001G340200--Sobic008G080000 Sobic001G340200--Sobic010G091300 Sobic003G252900 Sobic003G252900 Sobic001G340200--Sobic003G252900 Sobic008G058700 Sobic008G058700 Sobic001G340200--Sobic008G058700 Sobic001G340200--Sobic003G408300 Sobic005G034000 Sobic005G034000 Sobic001G340200--Sobic005G034000 Sobic003G424800 Sobic003G424800 Sobic001G340200--Sobic003G424800 Sobic003G126800 Sobic003G126800 Sobic001G340200--Sobic003G126800 Sobic004G248800 Sobic004G248800 Sobic009G117900--Sobic004G248800 Sobic004G297300 Sobic004G297300 Sobic009G117900--Sobic004G297300 Sobic003G362400 Sobic003G362400 Sobic009G117900--Sobic003G362400 Sobic010G257100 Sobic010G257100 Sobic009G117900--Sobic010G257100 Sobic002G194100 Sobic002G194100 Sobic009G117900--Sobic002G194100 Sobic004G196300 Sobic004G196300 Sobic009G117900--Sobic004G196300 Sobic007G163700 Sobic007G163700 Sobic009G117900--Sobic007G163700 Sobic001G529000 Sobic001G529000 Sobic009G117900--Sobic001G529000 Sobic009G191600 Sobic009G191600 Sobic009G117900--Sobic009G191600 Sobic004G347500 Sobic004G347500 Sobic009G052600--Sobic004G347500 Sobic010G024600 Sobic010G024600 Sobic009G052600--Sobic010G024600 Sobic003G098300 Sobic003G098300 Sobic009G052600--Sobic003G098300 Sobic001G386600 Sobic001G386600 Sobic009G052600--Sobic001G386600 Sobic005G021000 Sobic005G021000 Sobic009G052600--Sobic005G021000 Sobic007G053100 Sobic007G053100 Sobic009G052600--Sobic007G053100 Sobic001G261420 Sobic001G261420 Sobic009G052600--Sobic001G261420 Sobic002G177600 Sobic002G177600 Sobic009G052600--Sobic002G177600 Sobic003G011800 Sobic003G011800 Sobic009G052600--Sobic003G011800
Octagon: transcription factors


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