Gene annotation
Transcriptome id Sobic.001G340200.4,Sobic.001G340200.1
Synonym NF-YA6, Sb01g032710
Functional annotation nuclear transcription factor Y subunit, putative, expressed
UniProt C5WWM8
Pfam PF02045
Panther DB PTHR12632 PTHR12632:SF11
NCBI CDD -
KEGG Orthology K08064; NFYA, nuclear transcription factor Y, alpha
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G72830 : nuclear factor Y, subunit A3
RAP-DB (Rice) LOC_Os03g29760.3 : nuclear transcription factor Y subunit, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G340200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G486000 tentative name(PubMedID : 31536532)@nuclear transcription factor Y subunit, putative, expressed K08064: NFYA, nuclear transcription factor Y, alpha
2 Sobic.008G080000 leucine-rich repeat family protein, putative, expressed -
3 Sobic.010G091300 C2 domain containing protein, putative, expressed -
4 Sobic.003G252900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
5 Sobic.008G058700 metal cation transporter, putative, expressed -
6 Sobic.003G408300 WD domain, G-beta repeat domain containing protein, expressed K14791: periodic tryptophan protein 1
7 Sobic.005G034000 stem-specific protein TSJT1, putative, expressed -
8 Sobic.003G424800 MKI67 FHA domain-interacting nucleolar phosphoprotein(PubMedID : 24906815)@RNA recognition motif containing protein, putative, expressed K14838: nucleolar protein 15
9 Sobic.003G126800 cysteine proteinase inhibitor precursor protein, putative, expressed -
10 Sobic.002G332200 proteasome inhibitor-related, putative, expressed K06700: proteasome inhibitor subunit 1 (PI31)
11 Sobic.009G258500 notchless protein, putative, expressed K14855: RSA4, ribosome assembly protein 4
12 Sobic.002G044000 WD domain, G-beta repeat domain containing protein, expressed K03246: translation initiation factor 3 subunit I
13 Sobic.009G201800 MPPN domain containing protein, expressed K14313: NUP35, nuclear pore complex protein Nup53
14 Sobic.002G353000 5-formyltetrahydrofolate cyclo-ligase, putative, expressed K01934: 5-formyltetrahydrofolate cyclo-ligase
15 Sobic.007G074500 aminotransferase, putative, expressed K16871: 4-aminobutyrate---pyruvate transaminase
16 Sobic.001G168600 serpin domain containing protein, putative, expressed K13963: serpin B
17 Sobic.002G184900 SCO1 protein homolog, mitochondrial precursor, putative, expressed K07152: protein SCO1
18 Sobic.003G130600 MazG nucleotide pyrophosphohydrolase domain containing protein, expressed K11755: phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase
19 Sobic.001G512000 cyclin-dependent kinase inhibitor, putative, expressed -
20 Sobic.001G397000 argininosuccinate lyase, putative, expressed K01755: argH, argininosuccinate lyase


Gene co-expression network
sample Sobic001G340200 Sobic001G340200 Sobic001G486000 Sobic001G486000 Sobic001G340200--Sobic001G486000 Sobic008G080000 Sobic008G080000 Sobic001G340200--Sobic008G080000 Sobic010G091300 Sobic010G091300 Sobic001G340200--Sobic010G091300 Sobic003G252900 Sobic003G252900 Sobic001G340200--Sobic003G252900 Sobic008G058700 Sobic008G058700 Sobic001G340200--Sobic008G058700 Sobic003G408300 Sobic003G408300 Sobic001G340200--Sobic003G408300 Sobic005G034000 Sobic005G034000 Sobic001G340200--Sobic005G034000 Sobic003G424800 Sobic003G424800 Sobic001G340200--Sobic003G424800 Sobic003G126800 Sobic003G126800 Sobic001G340200--Sobic003G126800 Sobic006G251500 Sobic006G251500 Sobic001G486000--Sobic006G251500 Sobic001G486000--Sobic001G340200 Sobic001G486000--Sobic008G080000 Sobic009G052600 Sobic009G052600 Sobic001G486000--Sobic009G052600 Sobic001G486000--Sobic010G091300 Sobic001G486000--Sobic003G408300 Sobic009G108700 Sobic009G108700 Sobic001G486000--Sobic009G108700 Sobic004G066500 Sobic004G066500 Sobic001G486000--Sobic004G066500 Sobic001G454000 Sobic001G454000 Sobic001G486000--Sobic001G454000 Sobic009G193850 Sobic009G193850 Sobic008G080000--Sobic009G193850 Sobic008G080000--Sobic001G486000 Sobic008G080000--Sobic003G408300 Sobic002G177500 Sobic002G177500 Sobic008G080000--Sobic002G177500 Sobic009G065200 Sobic009G065200 Sobic008G080000--Sobic009G065200 Sobic008G111700 Sobic008G111700 Sobic008G080000--Sobic008G111700 Sobic002G148300 Sobic002G148300 Sobic008G080000--Sobic002G148300 Sobic002G088700 Sobic002G088700 Sobic008G080000--Sobic002G088700 Sobic004G057800 Sobic004G057800 Sobic008G080000--Sobic004G057800 Sobic006G245500 Sobic006G245500 Sobic010G091300--Sobic006G245500 Sobic009G043500 Sobic009G043500 Sobic010G091300--Sobic009G043500 Sobic002G332200 Sobic002G332200 Sobic010G091300--Sobic002G332200 Sobic001G205800 Sobic001G205800 Sobic010G091300--Sobic001G205800 Sobic010G091300--Sobic001G486000 Sobic004G166500 Sobic004G166500 Sobic010G091300--Sobic004G166500 Sobic010G091300--Sobic001G340200 Sobic009G117900 Sobic009G117900 Sobic010G091300--Sobic009G117900 Sobic010G091300--Sobic009G052600 Sobic003G252900--Sobic008G058700 Sobic003G312400 Sobic003G312400 Sobic003G252900--Sobic003G312400 Sobic003G252900--Sobic003G126800 Sobic003G319000 Sobic003G319000 Sobic003G252900--Sobic003G319000 Sobic003G410400 Sobic003G410400 Sobic003G252900--Sobic003G410400 Sobic001G294600 Sobic001G294600 Sobic003G252900--Sobic001G294600 Sobic006G129000 Sobic006G129000 Sobic003G252900--Sobic006G129000 Sobic009G182200 Sobic009G182200 Sobic003G252900--Sobic009G182200 Sobic010G088300 Sobic010G088300 Sobic003G252900--Sobic010G088300 Sobic008G058700--Sobic003G410400 Sobic004G083000 Sobic004G083000 Sobic008G058700--Sobic004G083000 Sobic008G058700--Sobic003G126800 Sobic008G058700--Sobic003G252900 Sobic009G070200 Sobic009G070200 Sobic008G058700--Sobic009G070200 Sobic003G043400 Sobic003G043400 Sobic008G058700--Sobic003G043400 Sobic002G044000 Sobic002G044000 Sobic008G058700--Sobic002G044000 Sobic003G358300 Sobic003G358300 Sobic008G058700--Sobic003G358300 Sobic009G160200 Sobic009G160200 Sobic008G058700--Sobic009G160200 Sobic008G016100 Sobic008G016100 Sobic003G408300--Sobic008G016100 Sobic002G263200 Sobic002G263200 Sobic003G408300--Sobic002G263200 Sobic007G187900 Sobic007G187900 Sobic003G408300--Sobic007G187900 Sobic002G116500 Sobic002G116500 Sobic003G408300--Sobic002G116500 Sobic001G168100 Sobic001G168100 Sobic003G408300--Sobic001G168100 Sobic006G084000 Sobic006G084000 Sobic003G408300--Sobic006G084000 Sobic003G408300--Sobic002G332200 Sobic003G408300--Sobic006G251500 Sobic009G143800 Sobic009G143800 Sobic003G408300--Sobic009G143800 Sobic005G034000--Sobic001G340200 Sobic009G178200 Sobic009G178200 Sobic005G034000--Sobic009G178200 Sobic005G034000--Sobic001G486000 Sobic005G034000--Sobic008G080000 Sobic009G150700 Sobic009G150700 Sobic005G034000--Sobic009G150700 Sobic007G092200 Sobic007G092200 Sobic005G034000--Sobic007G092200 Sobic006G281200 Sobic006G281200 Sobic005G034000--Sobic006G281200 Sobic001G543300 Sobic001G543300 Sobic005G034000--Sobic001G543300 Sobic001G147100 Sobic001G147100 Sobic005G034000--Sobic001G147100 Sobic001G117400 Sobic001G117400 Sobic003G424800--Sobic001G117400 Sobic002G116200 Sobic002G116200 Sobic003G424800--Sobic002G116200 Sobic002G413400 Sobic002G413400 Sobic003G424800--Sobic002G413400 Sobic003G424800--Sobic001G147100 Sobic003G362400 Sobic003G362400 Sobic003G424800--Sobic003G362400 Sobic001G529000 Sobic001G529000 Sobic003G424800--Sobic001G529000 Sobic010G008100 Sobic010G008100 Sobic003G424800--Sobic010G008100 Sobic009G008600 Sobic009G008600 Sobic003G424800--Sobic009G008600 Sobic001G331900 Sobic001G331900 Sobic003G424800--Sobic001G331900 Sobic003G126800--Sobic008G058700 Sobic003G126800--Sobic003G252900 Sobic003G126800--Sobic010G088300 Sobic003G031200 Sobic003G031200 Sobic003G126800--Sobic003G031200 Sobic003G126800--Sobic009G070200 Sobic004G297300 Sobic004G297300 Sobic003G126800--Sobic004G297300 Sobic003G126800--Sobic003G358300 Sobic001G066700 Sobic001G066700 Sobic003G126800--Sobic001G066700 Sobic003G039200 Sobic003G039200 Sobic003G126800--Sobic003G039200
Octagon: transcription factors


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