Gene annotation
| Transcriptome id | Sobic.001G383100.1 |
|---|---|
| Synonym | GLX2-2, Sb01g036340, GLY2 |
| Functional annotation | metallo-beta-lactamase family protein, putative, expressed |
| UniProt | C5X1M7 |
| Pfam | PF00753 PF16123 |
| Panther DB | PTHR11935 PTHR11935:SF94 |
| NCBI CDD | KOG0813; Glyoxylase |
| KEGG Orthology | K01069; gloB, gloC, hydroxyacylglutathione hydrolase |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT3G10850 : Metallo-hydrolase/oxidoreductase superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os03g21460.1 : metallo-beta-lactamase family protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a002322 |
| Brachypodium | KQK21840 , KQK21839 , KQK21838 |
| Barley | HORVU4Hr1G050810.4 , HORVU4Hr1G050810.5 , HORVU4Hr1G050810.6 , HORVU4Hr1G050810.7 , HORVU4Hr1G050810.1 , HORVU4Hr1G050810.2 , HORVU4Hr1G050810.3 , HORVU4Hr1G050810.8 , HORVU4Hr1G050810.9 |
| Wheat | TraesCS4D02G173800 , TraesCS4D02G173800 , TraesCS4A02G132900 , TraesCS4A02G132900 , TraesCS4B02G171800 , TraesCS4B02G171800 |
| Populus | - |
JBrowse
| Sobic.001G383100 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.002G101000 | mitochondrial prohibitin complex protein 2, putative, expressed | K17081: prohibitin 2 |
| 2 | Sobic.007G220900 | ribosomal L9, putative, expressed | K02939: RP-L9, MRPL9, large subunit ribosomal protein L9 |
| 3 | Sobic.004G310900 | emp24/gp25L/p24 family protein, putative, expressed | - |
| 4 | Sobic.003G424800 | MKI67 FHA domain-interacting nucleolar phosphoprotein(PubMedID : 24906815)@RNA recognition motif containing protein, putative, expressed | K14838: nucleolar protein 15 |
| 5 | Sobic.001G285300 | expressed protein | - |
| 6 | Sobic.004G166500 | N-carbamoylputrescine amidohydrolase(PubMedID : 27325899)@Up-regulated by silicon application under drought stress(PubMedID : 24813726)@N-carbamoylputrescine amidase, putative, expressed | K12251: N-carbamoylputrescine amidase |
| 7 | Sobic.006G143500 | expressed protein | - |
| 8 | Sobic.010G091300 | C2 domain containing protein, putative, expressed | - |
| 9 | Sobic.003G410500 | transaldolase, putative, expressed | K00616: E2.2.1.2, talA, transaldolase |
| 10 | Sobic.009G104100 | peptidase, M24 family protein, putative, expressed | - |
| 11 | Sobic.010G054300 | expressed protein | K17776: metaxin |
| 12 | Sobic.002G353000 | 5-formyltetrahydrofolate cyclo-ligase, putative, expressed | K01934: 5-formyltetrahydrofolate cyclo-ligase |
| 13 | Sobic.001G018200 | prohibitin-2, putative, expressed | K17081: prohibitin 2 |
| 14 | Sobic.001G397000 | argininosuccinate lyase, putative, expressed | K01755: argH, argininosuccinate lyase |
| 15 | Sobic.010G051500 | Ser/Thr protein phosphatase family protein, putative, expressed | K06269: serine/threonine-protein phosphatase PP1 catalytic subunit |
| 16 | Sobic.003G333800 | NADH-cytochrome b5 reductase, putative, expressed | K00326: cytochrome-b5 reductase |
| 17 | Sobic.001G517600 | ribosomal L18p/L5e family protein, putative, expressed | K02932: RP-L5e, large subunit ribosomal protein L5e |
| 18 | Sobic.002G184900 | SCO1 protein homolog, mitochondrial precursor, putative, expressed | K07152: protein SCO1 |
| 19 | Sobic.001G205800 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lanC-like protein 2, putative, expressed | - |
| 20 | Sobic.009G114400 | expressed protein | K14839: nucleolar protein 16 |
Gene co-expression network
Octagon: transcription factors
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