Gene annotation
Transcriptome id Sobic.010G104100.1
Synonym Sb10g009070, ATNFXL1, NFXL1
Functional annotation NF-X1-type zinc finger protein, putative, expressed
UniProt A0A1W0VSC2
Pfam PF01422
Panther DB PTHR12360 PTHR12360:SF0
NCBI CDD -
KEGG Orthology K12236; transcriptional repressor NF-X1
Gene Ontology GO:0008270; zinc ion binding GO:0006355regulation of transcription, DNA-templated GO:0005634nucleus GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G10170 : NF-X-like 1
RAP-DB (Rice) LOC_Os06g14190.1 : NF-X1-type zinc finger protein, putative, expressed
MaizeGDB (Corn) Zm00025a049369 , Zm00025a042735
Brachypodium PNT76112
Barley HORVU7Hr1G115270.9 , HORVU7Hr1G115270.7 , HORVU7Hr1G115270.6 , HORVU7Hr1G115270.5 , HORVU7Hr1G115270.4 , HORVU7Hr1G115270.3 , HORVU7Hr1G115270.2 , HORVU7Hr1G115270.1 , HORVU7Hr1G115270.8 , HORVU7Hr1G115270.13 , HORVU7Hr1G115270.12 , HORVU7Hr1G115270.11 , HORVU7Hr1G115270.10
Wheat TraesCS7B02G432300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G330700 CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
2 Sobic.009G185800 translation initiation factor SUI1, putative, expressed K03113: EIF1, translation initiation factor 1
3 Sobic.004G049900 ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
4 Sobic.002G333600 universal stress protein domain containing protein, putative, expressed -
5 Sobic.009G203100 expressed protein -
6 Sobic.003G253000 ubiquitin-conjugating enzyme, putative, expressed K10580: UBE2N, BLU, ubiquitin-conjugating enzyme E2 N
7 Sobic.009G174900 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
8 Sobic.002G204100 cytochrome c oxidase copper chaperone, putative, expressed K02260: cytochrome c oxidase assembly protein subunit 17
9 Sobic.003G130800 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
10 Sobic.003G337000 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
11 Sobic.001G415500 zinc finger, C3HC4 type domain containing protein, expressed K13125: nitric oxide synthase-interacting protein
12 Sobic.002G045300 ubiquitin-conjugating enzyme, putative, expressed K10573: UBE2A, UBC2, ubiquitin-conjugating enzyme E2 A
13 Sobic.003G181500 ZOS1-09 - C2H2 zinc finger protein, expressed -
14 Sobic.002G330000 core histone H2A/H2B/H3/H4, putative, expressed K11251: histone H2A
15 Sobic.001G433400 Zinc finger, C3HC4 type domain containing protein, expressed -
16 Sobic.003G279300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoethanolamine/phosphocholine phosphatase, putative, expressed K06124: phosphoethanolamine/phosphocholine phosphatase
17 Sobic.001G459200 MYB family transcription factor, putative, expressed -
18 Sobic.006G010600 peptidyl-prolyl cis-trans isomerase, putative, expressed K09578: peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
19 Sobic.006G108400 14-3-3 protein, putative, expressed K06630: 14-3-3 protein epsilon
20 Sobic.002G134001 - K14490: histidine-containing phosphotransfer peotein


Gene co-expression network
sample Sobic010G104100 Sobic010G104100 Sobic004G330700 Sobic004G330700 Sobic010G104100--Sobic004G330700 Sobic009G185800 Sobic009G185800 Sobic010G104100--Sobic009G185800 Sobic004G049900 Sobic004G049900 Sobic010G104100--Sobic004G049900 Sobic002G333600 Sobic002G333600 Sobic010G104100--Sobic002G333600 Sobic009G203100 Sobic009G203100 Sobic010G104100--Sobic009G203100 Sobic003G253000 Sobic003G253000 Sobic010G104100--Sobic003G253000 Sobic009G174900 Sobic009G174900 Sobic010G104100--Sobic009G174900 Sobic002G204100 Sobic002G204100 Sobic010G104100--Sobic002G204100 Sobic003G130800 Sobic003G130800 Sobic010G104100--Sobic003G130800 Sobic004G055200 Sobic004G055200 Sobic004G330700--Sobic004G055200 Sobic001G459200 Sobic001G459200 Sobic004G330700--Sobic001G459200 Sobic004G330700--Sobic009G185800 Sobic001G393500 Sobic001G393500 Sobic004G330700--Sobic001G393500 Sobic004G330700--Sobic003G130800 Sobic001G499300 Sobic001G499300 Sobic004G330700--Sobic001G499300 Sobic003G181500 Sobic003G181500 Sobic004G330700--Sobic003G181500 Sobic010G135000 Sobic010G135000 Sobic004G330700--Sobic010G135000 Sobic003G136000 Sobic003G136000 Sobic004G330700--Sobic003G136000 Sobic009G185800--Sobic001G459200 Sobic009G185800--Sobic004G049900 Sobic009G185800--Sobic003G253000 Sobic009G185800--Sobic003G130800 Sobic006G108400 Sobic006G108400 Sobic009G185800--Sobic006G108400 Sobic003G350300 Sobic003G350300 Sobic009G185800--Sobic003G350300 Sobic009G185800--Sobic004G330700 Sobic004G272800 Sobic004G272800 Sobic009G185800--Sobic004G272800 Sobic009G185800--Sobic003G181500 Sobic004G049900--Sobic003G253000 Sobic004G049900--Sobic009G185800 Sobic004G049900--Sobic006G108400 Sobic004G049900--Sobic003G130800 Sobic004G049900--Sobic001G459200 Sobic004G050000 Sobic004G050000 Sobic004G049900--Sobic004G050000 Sobic001G415500 Sobic001G415500 Sobic004G049900--Sobic001G415500 Sobic002G267500 Sobic002G267500 Sobic004G049900--Sobic002G267500 Sobic001G281400 Sobic001G281400 Sobic004G049900--Sobic001G281400 Sobic004G157000 Sobic004G157000 Sobic002G333600--Sobic004G157000 Sobic007G195701 Sobic007G195701 Sobic002G333600--Sobic007G195701 Sobic010G204600 Sobic010G204600 Sobic002G333600--Sobic010G204600 Sobic006G010600 Sobic006G010600 Sobic002G333600--Sobic006G010600 Sobic006G182100 Sobic006G182100 Sobic002G333600--Sobic006G182100 Sobic001G433400 Sobic001G433400 Sobic002G333600--Sobic001G433400 Sobic001G095300 Sobic001G095300 Sobic002G333600--Sobic001G095300 Sobic002G333600--Sobic003G181500 Sobic002G078400 Sobic002G078400 Sobic002G333600--Sobic002G078400 Sobic009G203100--Sobic001G459200 Sobic009G203100--Sobic002G204100 Sobic009G203100--Sobic009G185800 Sobic009G203100--Sobic003G253000 Sobic009G203100--Sobic004G055200 Sobic001G040800 Sobic001G040800 Sobic009G203100--Sobic001G040800 Sobic009G203100--Sobic004G330700 Sobic005G034400 Sobic005G034400 Sobic009G203100--Sobic005G034400 Sobic002G045300 Sobic002G045300 Sobic009G203100--Sobic002G045300 Sobic006G141500 Sobic006G141500 Sobic003G253000--Sobic006G141500 Sobic003G253000--Sobic004G049900 Sobic003G253000--Sobic002G267500 Sobic003G253000--Sobic004G272800 Sobic003G253000--Sobic001G459200 Sobic002G345300 Sobic002G345300 Sobic003G253000--Sobic002G345300 Sobic002G046100 Sobic002G046100 Sobic003G253000--Sobic002G046100 Sobic003G253000--Sobic009G185800 Sobic003G253000--Sobic006G108400 Sobic003G337000 Sobic003G337000 Sobic009G174900--Sobic003G337000 Sobic002G400000 Sobic002G400000 Sobic009G174900--Sobic002G400000 Sobic004G327300 Sobic004G327300 Sobic009G174900--Sobic004G327300 Sobic009G135600 Sobic009G135600 Sobic009G174900--Sobic009G135600 Sobic007G168600 Sobic007G168600 Sobic009G174900--Sobic007G168600 Sobic006G212100 Sobic006G212100 Sobic009G174900--Sobic006G212100 Sobic001G491100 Sobic001G491100 Sobic009G174900--Sobic001G491100 Sobic002G134001 Sobic002G134001 Sobic009G174900--Sobic002G134001 Sobic001G054200 Sobic001G054200 Sobic009G174900--Sobic001G054200 Sobic002G204100--Sobic009G203100 Sobic002G204100--Sobic003G253000 Sobic002G204100--Sobic001G459200 Sobic002G204100--Sobic009G185800 Sobic002G204100--Sobic005G034400 Sobic002G204100--Sobic004G049900 Sobic002G204100--Sobic004G055200 Sobic008G189300 Sobic008G189300 Sobic002G204100--Sobic008G189300 Sobic002G187500 Sobic002G187500 Sobic002G204100--Sobic002G187500 Sobic003G130800--Sobic009G185800 Sobic003G130800--Sobic003G253000 Sobic003G130800--Sobic001G459200 Sobic006G180200 Sobic006G180200 Sobic003G130800--Sobic006G180200 Sobic003G130800--Sobic002G345300 Sobic003G130800--Sobic004G049900 Sobic003G130800--Sobic004G055200 Sobic003G130800--Sobic010G135000 Sobic003G130800--Sobic003G181500
Octagon: transcription factors


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