Gene annotation
Transcriptome id Sobic.010G141500.6,Sobic.010G141500.3,Sobic.010G141500.4,Sobic.010G141500.1,Sobic.010G141500.5
Synonym OTS1, ULP1D
Functional annotation ulp1 protease family protein, putative, expressed
UniProt A0A194YK81 , A0A1W0VSY2 , A0A194YJ73 , A0A1W0VT06
Pfam PF02902
Panther DB PTHR12606 PTHR12606:SF28
NCBI CDD KOG0778; Protease, Ulp1 family KOG3246Sentrin-specific cysteine protease (Ulp1 family)
KEGG Orthology K16287; ubiquitin-like-specific protease 1C/D
Gene Ontology GO:0008234; cysteine-type peptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT1G60220 : UB-like protease 1D
RAP-DB (Rice) LOC_Os06g29310.1 : ulp1 protease family protein, putative, expressed
MaizeGDB (Corn) Zm00025a050709
Brachypodium KQK18400 , KQK18399
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G141800 expressed protein -
2 Sobic.001G030000 FG-GAP repeat-containing protein, putative, expressed -
3 Sobic.003G163200 expressed protein K11654: SMARCA5, SNF2H, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
4 Sobic.004G265500 SET domain protein SDG117, putative, expressed -
5 Sobic.001G453000 no apical meristem protein, putative, expressed -
6 Sobic.001G542300 expressed protein -
7 Sobic.007G039300 ATP-binding region, ATPase-like domain containing protein, expressed -
8 Sobic.003G394200 vacuolar protein sorting-associated protein 53, putative, expressed -
9 Sobic.001G308400 expressed protein -
10 Sobic.003G405500 mannosyl-oligosaccharide glucosidase, putative, expressed K01228: mannosyl-oligosaccharide glucosidase
11 Sobic.007G126500 - K14808: DDX54, ATP-dependent RNA helicase DDX54/DBP10
12 Sobic.003G124600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12813: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
13 Sobic.002G119600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
14 Sobic.009G122500 expressed protein -
15 Sobic.001G138400 crooked neck, putative, expressed K12869: CRN, CRNKL1, CLF1, crooked neck
16 Sobic.009G049400 "SRS3(Ortholog in rice:Kitagawa et al., 2010)"(PubMedID : 31659920)@ATKINESIN-13A/KINESIN-13A, putative, expressed K10393: KIF2_24, kinesin family member 2/24
17 Sobic.005G114500 growth regulator related protein, putative, expressed -
18 Sobic.002G063900 zinc ion binding protein, putative, expressed -
19 Sobic.006G240100 BRCA1-associated protein, putative, expressed K10632: BRCA1-associated protein
20 Sobic.003G113300 expressed protein -


Gene co-expression network
sample Sobic010G141500 Sobic010G141500 Sobic004G141800 Sobic004G141800 Sobic010G141500--Sobic004G141800 Sobic001G030000 Sobic001G030000 Sobic010G141500--Sobic001G030000 Sobic003G163200 Sobic003G163200 Sobic010G141500--Sobic003G163200 Sobic004G265500 Sobic004G265500 Sobic010G141500--Sobic004G265500 Sobic001G453000 Sobic001G453000 Sobic010G141500--Sobic001G453000 Sobic001G542300 Sobic001G542300 Sobic010G141500--Sobic001G542300 Sobic007G039300 Sobic007G039300 Sobic010G141500--Sobic007G039300 Sobic003G394200 Sobic003G394200 Sobic010G141500--Sobic003G394200 Sobic001G308400 Sobic001G308400 Sobic010G141500--Sobic001G308400 Sobic002G430300 Sobic002G430300 Sobic004G141800--Sobic002G430300 Sobic003G405500 Sobic003G405500 Sobic004G141800--Sobic003G405500 Sobic004G236800 Sobic004G236800 Sobic004G141800--Sobic004G236800 Sobic002G227500 Sobic002G227500 Sobic004G141800--Sobic002G227500 Sobic004G141800--Sobic001G030000 Sobic003G143800 Sobic003G143800 Sobic004G141800--Sobic003G143800 Sobic003G312700 Sobic003G312700 Sobic004G141800--Sobic003G312700 Sobic001G035200 Sobic001G035200 Sobic004G141800--Sobic001G035200 Sobic002G386600 Sobic002G386600 Sobic004G141800--Sobic002G386600 Sobic001G030000--Sobic001G308400 Sobic001G030000--Sobic004G141800 Sobic010G169900 Sobic010G169900 Sobic001G030000--Sobic010G169900 Sobic003G043000 Sobic003G043000 Sobic001G030000--Sobic003G043000 Sobic001G030000--Sobic004G265500 Sobic001G030000--Sobic002G227500 Sobic005G110499 Sobic005G110499 Sobic001G030000--Sobic005G110499 Sobic001G030000--Sobic003G405500 Sobic001G030000--Sobic003G163200 Sobic003G163200--Sobic004G265500 Sobic002G042600 Sobic002G042600 Sobic003G163200--Sobic002G042600 Sobic010G000800 Sobic010G000800 Sobic003G163200--Sobic010G000800 Sobic003G163200--Sobic003G043000 Sobic002G179400 Sobic002G179400 Sobic003G163200--Sobic002G179400 Sobic010G223100 Sobic010G223100 Sobic003G163200--Sobic010G223100 Sobic002G429300 Sobic002G429300 Sobic003G163200--Sobic002G429300 Sobic006G184900 Sobic006G184900 Sobic003G163200--Sobic006G184900 Sobic004G204100 Sobic004G204100 Sobic003G163200--Sobic004G204100 Sobic004G265500--Sobic003G043000 Sobic004G265500--Sobic003G163200 Sobic004G265500--Sobic001G308400 Sobic004G357100 Sobic004G357100 Sobic004G265500--Sobic004G357100 Sobic004G265500--Sobic010G000800 Sobic004G265500--Sobic002G042600 Sobic004G053500 Sobic004G053500 Sobic004G265500--Sobic004G053500 SobicK028600 SobicK028600 Sobic004G265500--SobicK028600 Sobic004G265500--Sobic002G227500 Sobic007G168300 Sobic007G168300 Sobic001G453000--Sobic007G168300 Sobic003G294600 Sobic003G294600 Sobic001G453000--Sobic003G294600 Sobic009G142000 Sobic009G142000 Sobic001G453000--Sobic009G142000 Sobic003G042400 Sobic003G042400 Sobic001G453000--Sobic003G042400 Sobic007G155500 Sobic007G155500 Sobic001G453000--Sobic007G155500 Sobic002G396500 Sobic002G396500 Sobic001G453000--Sobic002G396500 Sobic004G085000 Sobic004G085000 Sobic001G453000--Sobic004G085000 Sobic001G453000--Sobic002G179400 Sobic010G114900 Sobic010G114900 Sobic001G453000--Sobic010G114900 Sobic002G126300 Sobic002G126300 Sobic001G542300--Sobic002G126300 Sobic004G279500 Sobic004G279500 Sobic001G542300--Sobic004G279500 Sobic002G164300 Sobic002G164300 Sobic001G542300--Sobic002G164300 Sobic002G357700 Sobic002G357700 Sobic001G542300--Sobic002G357700 Sobic009G088000 Sobic009G088000 Sobic001G542300--Sobic009G088000 Sobic010G204400 Sobic010G204400 Sobic001G542300--Sobic010G204400 Sobic010G209400 Sobic010G209400 Sobic001G542300--Sobic010G209400 Sobic007G061700 Sobic007G061700 Sobic001G542300--Sobic007G061700 Sobic002G299100 Sobic002G299100 Sobic001G542300--Sobic002G299100 Sobic004G020900 Sobic004G020900 Sobic007G039300--Sobic004G020900 Sobic008G017900 Sobic008G017900 Sobic007G039300--Sobic008G017900 Sobic002G154400 Sobic002G154400 Sobic007G039300--Sobic002G154400 Sobic002G263700 Sobic002G263700 Sobic007G039300--Sobic002G263700 Sobic004G350200 Sobic004G350200 Sobic007G039300--Sobic004G350200 Sobic003G124600 Sobic003G124600 Sobic007G039300--Sobic003G124600 Sobic010G269300 Sobic010G269300 Sobic007G039300--Sobic010G269300 Sobic003G113300 Sobic003G113300 Sobic007G039300--Sobic003G113300 Sobic003G130900 Sobic003G130900 Sobic007G039300--Sobic003G130900 Sobic004G084500 Sobic004G084500 Sobic003G394200--Sobic004G084500 Sobic006G203300 Sobic006G203300 Sobic003G394200--Sobic006G203300 Sobic006G128100 Sobic006G128100 Sobic003G394200--Sobic006G128100 Sobic010G223400 Sobic010G223400 Sobic003G394200--Sobic010G223400 Sobic003G394200--Sobic001G308400 Sobic009G049400 Sobic009G049400 Sobic003G394200--Sobic009G049400 Sobic003G270600 Sobic003G270600 Sobic003G394200--Sobic003G270600 Sobic003G189600 Sobic003G189600 Sobic003G394200--Sobic003G189600 Sobic001G369000 Sobic001G369000 Sobic003G394200--Sobic001G369000 Sobic001G308400--Sobic004G265500 Sobic001G308400--Sobic002G227500 Sobic001G308400--SobicK028600 Sobic001G308400--Sobic003G043000 Sobic001G308400--Sobic010G169900 Sobic001G308400--Sobic006G128100 Sobic001G308400--Sobic004G357100 Sobic001G156900 Sobic001G156900 Sobic001G308400--Sobic001G156900 Sobic001G308400--Sobic003G394200
Octagon: transcription factors


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