Gene annotation
Transcriptome id Sobic.010G146400.1,Sobic.010G146400.2
Synonym Sb10g019590, PAP2, IAA27, SbIAA25, auxin/indole-3-acetic acid (Aux/IAA)
Functional annotation "domain confirmed by Pfam database, expression induced by IAA treatment" (PubMedID : 20499123)
OsIAA21 - Auxin-responsive Aux/IAA gene family member, expressed
UniProt C5Z353
Pfam PF02309
Panther DB PTHR31734:SF40 PTHR31734
NCBI CDD -
KEGG Orthology K14484; auxin-responsive protein IAA
Gene Ontology GO:0005634; nucleus GO:0006355regulation of transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT4G29080 : phytochrome-associated protein 2
RAP-DB (Rice) LOC_Os06g22870.1 : OsIAA21 - Auxin-responsive Aux/IAA gene family member, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU0Hr1G021630.1
Wheat TraesCS7D02G339300 , TraesCS7D02G339300 , TraesCS7A02G331100 , TraesCS7B02G242800
Populus PNT43734 , PNT43731 , PNT43733 , PNT43732


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G223200 polypyrimidine tract-binding protein, putative, expressed K14948: PTBP2, polypyrimidine tract-binding protein 2
2 Sobic.001G486500 tRNA methyltransferase, putative, expressed K00566: mnmA, tRNA-uridine 2-sulfurtransferase
3 Sobic.003G363500 dual specificity protein phosphatase, putative, expressed -
4 Sobic.009G255300 OsClp8 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
5 Sobic.005G154900 cytokinin inducible protein, putative, expressed -
6 Sobic.003G180300 expressed protein -
7 Sobic.002G103500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
8 Sobic.002G212500 expressed protein -
9 Sobic.002G097400 expressed protein -
10 Sobic.005G001400 signal recognition particle receptor subunit beta, putative, expressed K12272: SRPRB, signal recognition particle receptor subunit beta
11 Sobic.005G110200 - -
12 Sobic.005G090401 - -
13 Sobic.001G284100 RCD1, putative, expressed -
14 Sobic.006G253000 expressed protein -
15 Sobic.003G414300 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed K10532: heparan-alpha-glucosaminide N-acetyltransferase
16 Sobic.009G213300 OsPOP10 - Putative Prolyl Oligopeptidase homologue, expressed -
17 Sobic.002G371500 RNA recognition motif containing protein, putative, expressed -
18 Sobic.008G088833 - -
19 Sobic.002G005700 - -
20 Sobic.007G013500 expressed protein -


Gene co-expression network
sample Sobic010G146400 Sobic010G146400 Sobic003G223200 Sobic003G223200 Sobic010G146400--Sobic003G223200 Sobic001G486500 Sobic001G486500 Sobic010G146400--Sobic001G486500 Sobic003G363500 Sobic003G363500 Sobic010G146400--Sobic003G363500 Sobic009G255300 Sobic009G255300 Sobic010G146400--Sobic009G255300 Sobic005G154900 Sobic005G154900 Sobic010G146400--Sobic005G154900 Sobic003G180300 Sobic003G180300 Sobic010G146400--Sobic003G180300 Sobic002G103500 Sobic002G103500 Sobic010G146400--Sobic002G103500 Sobic002G212500 Sobic002G212500 Sobic010G146400--Sobic002G212500 Sobic002G097400 Sobic002G097400 Sobic010G146400--Sobic002G097400 Sobic002G371500 Sobic002G371500 Sobic003G223200--Sobic002G371500 Sobic003G223200--Sobic003G363500 Sobic001G017800 Sobic001G017800 Sobic003G223200--Sobic001G017800 Sobic001G237700 Sobic001G237700 Sobic003G223200--Sobic001G237700 Sobic001G423700 Sobic001G423700 Sobic003G223200--Sobic001G423700 Sobic001G449400 Sobic001G449400 Sobic003G223200--Sobic001G449400 Sobic004G351600 Sobic004G351600 Sobic003G223200--Sobic004G351600 Sobic010G151900 Sobic010G151900 Sobic003G223200--Sobic010G151900 Sobic003G219400 Sobic003G219400 Sobic003G223200--Sobic003G219400 Sobic009G164400 Sobic009G164400 Sobic001G486500--Sobic009G164400 Sobic003G381200 Sobic003G381200 Sobic001G486500--Sobic003G381200 Sobic001G090500 Sobic001G090500 Sobic001G486500--Sobic001G090500 Sobic002G168300 Sobic002G168300 Sobic001G486500--Sobic002G168300 Sobic004G263600 Sobic004G263600 Sobic001G486500--Sobic004G263600 Sobic003G434700 Sobic003G434700 Sobic001G486500--Sobic003G434700 Sobic001G219700 Sobic001G219700 Sobic001G486500--Sobic001G219700 Sobic003G369400 Sobic003G369400 Sobic001G486500--Sobic003G369400 Sobic005G014700 Sobic005G014700 Sobic001G486500--Sobic005G014700 Sobic003G071500 Sobic003G071500 Sobic003G363500--Sobic003G071500 Sobic003G363500--Sobic002G103500 Sobic004G066200 Sobic004G066200 Sobic003G363500--Sobic004G066200 Sobic003G363500--Sobic002G371500 Sobic003G363500--Sobic010G151900 Sobic007G104800 Sobic007G104800 Sobic003G363500--Sobic007G104800 Sobic001G241100 Sobic001G241100 Sobic003G363500--Sobic001G241100 Sobic007G078600 Sobic007G078600 Sobic003G363500--Sobic007G078600 Sobic006G200600 Sobic006G200600 Sobic003G363500--Sobic006G200600 Sobic003G179100 Sobic003G179100 Sobic009G255300--Sobic003G179100 Sobic007G013500 Sobic007G013500 Sobic009G255300--Sobic007G013500 Sobic006G278500 Sobic006G278500 Sobic009G255300--Sobic006G278500 Sobic010G036000 Sobic010G036000 Sobic009G255300--Sobic010G036000 Sobic002G285300 Sobic002G285300 Sobic009G255300--Sobic002G285300 Sobic004G072000 Sobic004G072000 Sobic009G255300--Sobic004G072000 Sobic010G073300 Sobic010G073300 Sobic009G255300--Sobic010G073300 Sobic003G440400 Sobic003G440400 Sobic009G255300--Sobic003G440400 Sobic008G139900 Sobic008G139900 Sobic009G255300--Sobic008G139900 Sobic010G121500 Sobic010G121500 Sobic005G154900--Sobic010G121500 Sobic005G090401 Sobic005G090401 Sobic005G154900--Sobic005G090401 Sobic001G474600 Sobic001G474600 Sobic005G154900--Sobic001G474600 Sobic003G252200 Sobic003G252200 Sobic005G154900--Sobic003G252200 Sobic002G173000 Sobic002G173000 Sobic005G154900--Sobic002G173000 Sobic003G241800 Sobic003G241800 Sobic005G154900--Sobic003G241800 Sobic009G161550 Sobic009G161550 Sobic005G154900--Sobic009G161550 Sobic008G027000 Sobic008G027000 Sobic005G154900--Sobic008G027000 Sobic005G032800 Sobic005G032800 Sobic005G154900--Sobic005G032800 Sobic001G208900 Sobic001G208900 Sobic003G180300--Sobic001G208900 Sobic002G427700 Sobic002G427700 Sobic003G180300--Sobic002G427700 Sobic009G077700 Sobic009G077700 Sobic003G180300--Sobic009G077700 Sobic003G257600 Sobic003G257600 Sobic003G180300--Sobic003G257600 Sobic010G101500 Sobic010G101500 Sobic003G180300--Sobic010G101500 Sobic008G075900 Sobic008G075900 Sobic003G180300--Sobic008G075900 Sobic009G178100 Sobic009G178100 Sobic003G180300--Sobic009G178100 Sobic001G204501 Sobic001G204501 Sobic003G180300--Sobic001G204501 Sobic001G005900 Sobic001G005900 Sobic003G180300--Sobic001G005900 Sobic002G103500--Sobic003G363500 Sobic010G056200 Sobic010G056200 Sobic002G103500--Sobic010G056200 Sobic003G144400 Sobic003G144400 Sobic002G103500--Sobic003G144400 Sobic002G380400 Sobic002G380400 Sobic002G103500--Sobic002G380400 Sobic009G114600 Sobic009G114600 Sobic002G103500--Sobic009G114600 Sobic004G113800 Sobic004G113800 Sobic002G103500--Sobic004G113800 Sobic007G190333 Sobic007G190333 Sobic002G103500--Sobic007G190333 Sobic001G107500 Sobic001G107500 Sobic002G103500--Sobic001G107500 Sobic009G034200 Sobic009G034200 Sobic002G103500--Sobic009G034200 Sobic009G220500 Sobic009G220500 Sobic002G212500--Sobic009G220500 Sobic006G036566 Sobic006G036566 Sobic002G212500--Sobic006G036566 Sobic010G239600 Sobic010G239600 Sobic002G212500--Sobic010G239600 Sobic002G033300 Sobic002G033300 Sobic002G212500--Sobic002G033300 Sobic010G240100 Sobic010G240100 Sobic002G212500--Sobic010G240100 Sobic009G003300 Sobic009G003300 Sobic002G212500--Sobic009G003300 Sobic002G124600 Sobic002G124600 Sobic002G212500--Sobic002G124600 Sobic002G169633 Sobic002G169633 Sobic002G212500--Sobic002G169633 Sobic002G212500--Sobic005G032800 Sobic010G024300 Sobic010G024300 Sobic002G097400--Sobic010G024300 Sobic001G073000 Sobic001G073000 Sobic002G097400--Sobic001G073000 Sobic001G460600 Sobic001G460600 Sobic002G097400--Sobic001G460600 Sobic007G216100 Sobic007G216100 Sobic002G097400--Sobic007G216100 Sobic007G199200 Sobic007G199200 Sobic002G097400--Sobic007G199200 Sobic001G524500 Sobic001G524500 Sobic002G097400--Sobic001G524500 Sobic009G259700 Sobic009G259700 Sobic002G097400--Sobic009G259700 Sobic010G027600 Sobic010G027600 Sobic002G097400--Sobic010G027600 Sobic009G217100 Sobic009G217100 Sobic002G097400--Sobic009G217100
Octagon: transcription factors


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