Gene annotation
Transcriptome id Sobic.010G164400.1
Synonym HSFC1, Sb10g021800, AT-HSFC1
Functional annotation HSF-type DNA-binding domain containing protein, expressed
UniProt C5Z4I9
Pfam PF00447
Panther DB PTHR10015 PTHR10015:SF152
NCBI CDD -
KEGG Orthology K09419; heat shock transcription factor, other eukaryote
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005634nucleus GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT3G24520 : heat shock transcription factor C1
RAP-DB (Rice) LOC_Os06g35960.1 : HSF-type DNA-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a045167 , Zm00025a015267 , Zm00025a038009 , Zm00025a040051 , Zm00025a020093 , Zm00025a051078 , Zm00025a008557 , Zm00025a048930 , Zm00025a002613 , Zm00025a033648 , Zm00025a020360
Brachypodium KQK05247 , KQK14978 , KQK14979 , KQK05248 , PNT68735 , KQK18031 , KQK12714 , KQK18032 , KQJ99265 , PNT77358 , PNT72861 , PNT72862 , PNT70844 , KQJ99684 , KQK21569 , KQK23525 , KQK09735 , KQK23526
Barley HORVU4Hr1G090090.2 , HORVU4Hr1G090090.3 , HORVU4Hr1G090090.4 , HORVU4Hr1G090090.5 , HORVU2Hr1G026020.1 , HORVU3Hr1G071550.3 , HORVU3Hr1G071550.2 , HORVU1Hr1G081300.3 , HORVU1Hr1G081300.1 , HORVU3Hr1G071550.4 , HORVU7Hr1G088920.2 , HORVU7Hr1G088920.3 , HORVU7Hr1G088920.1 , HORVU4Hr1G090850.1 , HORVU4Hr1G090850.2 , HORVU5Hr1G105770.2 , HORVU5Hr1G105770.4 , HORVU5Hr1G105770.1 , HORVU5Hr1G105770.3
Wheat TraesCS3B02G323800 , TraesCS2D02G211400 , TraesCS2D02G211400 , TraesCS5D02G445100 , TraesCS5D02G445100 , TraesCS3A02G289200 , TraesCS2A02G146600 , TraesCS7A02G355300 , TraesCS7D02G367700 , TraesCS2B02G171900 , TraesCS2B02G232000 , TraesCS2A02G204500 , TraesCS2A02G204500 , TraesCS7B02G272500 , TraesCS2B02G232000 , TraesCS2D02G151200 , TraesCS5A02G437900 , TraesCS5A02G437900 , TraesCS5A02G437900
Populus PNT39523


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cDNA sequences
Sobic.010G164400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G385900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@stress responsive protein, putative, expressed -
2 Sobic.001G205800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lanC-like protein 2, putative, expressed -
3 Sobic.010G221800 Phosphoglycerate kinase(PubMedID : 26186930)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@phosphoglycerate kinase protein, putative, expressed K00927: PGK, phosphoglycerate kinase
4 Sobic.002G389100 cytochrome P450 72A1, putative, expressed -
5 Sobic.002G416500 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.003G307100 serpin domain containing protein, putative, expressed K13963: serpin B
7 Sobic.009G006500 integral membrane protein DUF6 containing protein, expressed -
8 Sobic.001G508400 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
9 Sobic.004G232300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@annexin, putative, expressed -
10 Sobic.008G034300 expressed protein -
11 Sobic.008G170500 AGC_PVPK_like_kin82y.20 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
12 Sobic.004G139100 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
13 Sobic.004G101400 Up-reguralion under drought(PubMedID : 24916767)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
14 Sobic.009G158500 - -
15 Sobic.002G107400 aldehyde oxidase, putative, expressed -
16 Sobic.004G108100 Ca exchanger(PubMedID : 22196357)@calcium-binding EF hand family protein, putative, expressed -
17 Sobic.010G170300 Os9bglu31 - beta-glucosidase, dhurrinase, similar to G. max hydroxyisourate hydrolase, expressed K01188: beta-glucosidase
18 Sobic.001G452200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Caleosin-related family protein("PubMedID : 26759170,PubMedID : 24597475")@caleosin related protein, putative, expressed K17991: peroxygenase
19 Sobic.004G261400 xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase
20 Sobic.001G256000 expressed protein -


Gene co-expression network
sample Sobic010G164400 Sobic010G164400 Sobic001G385900 Sobic001G385900 Sobic010G164400--Sobic001G385900 Sobic001G205800 Sobic001G205800 Sobic010G164400--Sobic001G205800 Sobic010G221800 Sobic010G221800 Sobic010G164400--Sobic010G221800 Sobic002G389100 Sobic002G389100 Sobic010G164400--Sobic002G389100 Sobic002G416500 Sobic002G416500 Sobic010G164400--Sobic002G416500 Sobic003G307100 Sobic003G307100 Sobic010G164400--Sobic003G307100 Sobic009G006500 Sobic009G006500 Sobic010G164400--Sobic009G006500 Sobic001G508400 Sobic001G508400 Sobic010G164400--Sobic001G508400 Sobic004G232300 Sobic004G232300 Sobic010G164400--Sobic004G232300 Sobic001G385900--Sobic001G205800 Sobic008G170500 Sobic008G170500 Sobic001G385900--Sobic008G170500 Sobic001G385900--Sobic010G164400 Sobic002G374650 Sobic002G374650 Sobic001G385900--Sobic002G374650 Sobic001G385900--Sobic010G221800 Sobic004G108100 Sobic004G108100 Sobic001G385900--Sobic004G108100 Sobic003G300900 Sobic003G300900 Sobic001G385900--Sobic003G300900 Sobic001G385900--Sobic002G389100 Sobic001G385900--Sobic002G416500 Sobic001G205800--Sobic008G170500 Sobic001G205800--Sobic001G385900 Sobic008G034300 Sobic008G034300 Sobic001G205800--Sobic008G034300 Sobic006G245500 Sobic006G245500 Sobic001G205800--Sobic006G245500 Sobic001G205800--Sobic010G221800 Sobic001G205800--Sobic010G164400 Sobic003G128700 Sobic003G128700 Sobic001G205800--Sobic003G128700 Sobic003G386800 Sobic003G386800 Sobic001G205800--Sobic003G386800 Sobic001G205800--Sobic003G300900 Sobic010G221800--Sobic001G205800 Sobic010G221800--Sobic001G385900 Sobic010G221800--Sobic008G034300 Sobic010G221800--Sobic008G170500 Sobic010G221800--Sobic010G164400 Sobic009G111400 Sobic009G111400 Sobic010G221800--Sobic009G111400 Sobic010G221800--Sobic006G245500 Sobic010G221800--Sobic002G389100 Sobic002G231000 Sobic002G231000 Sobic010G221800--Sobic002G231000 Sobic002G389100--Sobic001G508400 Sobic002G389100--Sobic002G416500 Sobic004G261400 Sobic004G261400 Sobic002G389100--Sobic004G261400 Sobic009G073800 Sobic009G073800 Sobic002G389100--Sobic009G073800 Sobic006G012800 Sobic006G012800 Sobic002G389100--Sobic006G012800 Sobic002G307600 Sobic002G307600 Sobic002G389100--Sobic002G307600 Sobic010G067400 Sobic010G067400 Sobic002G389100--Sobic010G067400 Sobic004G126700 Sobic004G126700 Sobic002G389100--Sobic004G126700 Sobic009G158500 Sobic009G158500 Sobic002G389100--Sobic009G158500 Sobic002G416500--Sobic001G508400 Sobic006G181900 Sobic006G181900 Sobic002G416500--Sobic006G181900 Sobic002G416500--Sobic002G389100 Sobic003G015200 Sobic003G015200 Sobic002G416500--Sobic003G015200 Sobic002G416500--Sobic009G006500 Sobic007G058600 Sobic007G058600 Sobic002G416500--Sobic007G058600 Sobic001G026300 Sobic001G026300 Sobic002G416500--Sobic001G026300 Sobic001G452200 Sobic001G452200 Sobic002G416500--Sobic001G452200 Sobic002G416500--Sobic004G261400 Sobic003G307100--Sobic004G232300 Sobic003G307100--Sobic001G452200 Sobic003G307100--Sobic001G508400 Sobic003G307100--Sobic009G158500 Sobic003G307100--Sobic002G416500 Sobic003G307100--Sobic006G181900 Sobic001G409400 Sobic001G409400 Sobic003G307100--Sobic001G409400 Sobic004G101400 Sobic004G101400 Sobic003G307100--Sobic004G101400 Sobic003G307100--Sobic002G389100 Sobic009G015500 Sobic009G015500 Sobic009G006500--Sobic009G015500 Sobic009G006500--Sobic007G058600 Sobic009G006500--Sobic003G015200 Sobic004G308300 Sobic004G308300 Sobic009G006500--Sobic004G308300 Sobic009G006500--Sobic006G181900 Sobic010G070750 Sobic010G070750 Sobic009G006500--Sobic010G070750 Sobic006G142000 Sobic006G142000 Sobic009G006500--Sobic006G142000 Sobic002G107400 Sobic002G107400 Sobic009G006500--Sobic002G107400 Sobic001G323600 Sobic001G323600 Sobic009G006500--Sobic001G323600 Sobic001G508400--Sobic009G158500 Sobic001G508400--Sobic006G181900 Sobic001G508400--Sobic002G416500 Sobic001G508400--Sobic009G015500 Sobic001G508400--Sobic002G389100 Sobic009G158600 Sobic009G158600 Sobic001G508400--Sobic009G158600 Sobic001G508400--Sobic009G006500 Sobic001G508400--Sobic007G058600 Sobic001G508400--Sobic006G012800 Sobic004G232300--Sobic003G307100 Sobic010G170300 Sobic010G170300 Sobic004G232300--Sobic010G170300 Sobic009G222000 Sobic009G222000 Sobic004G232300--Sobic009G222000 Sobic004G232300--Sobic004G261400 Sobic004G232300--Sobic001G452200 Sobic004G232300--Sobic002G416500 Sobic004G232300--Sobic003G015200 Sobic004G232300--Sobic002G389100 Sobic006G074200 Sobic006G074200 Sobic004G232300--Sobic006G074200
Octagon: transcription factors


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