Gene annotation
Transcriptome id Sobic.010G180600.1
Synonym SLR, IAA14
Functional annotation OsIAA23 - Auxin-responsive Aux/IAA gene family member, expressed
UniProt A0A194YJY2
Pfam PF02309
Panther DB PTHR31734 PTHR31734:SF27
NCBI CDD -
KEGG Orthology K14484; auxin-responsive protein IAA
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT4G14550 : indole-3-acetic acid inducible 14
RAP-DB (Rice) LOC_Os06g39590.1 : OsIAA23 - Auxin-responsive Aux/IAA gene family member, expressed
MaizeGDB (Corn) Zm00025a042258
Brachypodium KQK02999 , KQK07226 , KQK17820 , KQK07228 , KQK07227 , KQK14081 , KQK14082 , KQK14083 , KQJ85960 , KQJ85961
Barley HORVU3Hr1G022540.8 , HORVU3Hr1G022540.4 , HORVU3Hr1G022540.5 , HORVU3Hr1G022540.6 , HORVU3Hr1G022540.7 , HORVU3Hr1G022540.1 , HORVU3Hr1G022540.2 , HORVU1Hr1G025670.5 , HORVU1Hr1G025670.4 , HORVU1Hr1G025670.7 , HORVU1Hr1G025670.1 , HORVU1Hr1G025670.3 , HORVU1Hr1G025670.2 , HORVU1Hr1G025670.9 , HORVU1Hr1G025670.8 , HORVU5Hr1G014300.5 , HORVU5Hr1G014300.4 , HORVU5Hr1G014300.6 , HORVU5Hr1G014300.1 , HORVU5Hr1G014300.3 , HORVU5Hr1G014300.2 , HORVU1Hr1G025670.6 , HORVU5Hr1G093580.6 , HORVU5Hr1G093580.7 , HORVU5Hr1G093580.4 , HORVU5Hr1G093580.2 , HORVU5Hr1G093580.3 , HORVU5Hr1G093580.8 , HORVU6Hr1G088140.1 , HORVU6Hr1G088140.2 , HORVU7Hr1G084940.1 , HORVU7Hr1G084940.2 , HORVU7Hr1G084940.3
Wheat TraesCS3D02G123400 , TraesCS5B02G058500 , TraesCS3A02G121300 , TraesCS3A02G121300 , TraesCS5D02G069300 , TraesCS5D02G388300 , TraesCS5D02G388300 , TraesCS7A02G371500 , TraesCS5B02G381900 , TraesCS1D02G119500 , TraesCS7D02G351400 , TraesCS1B02G138100 , TraesCS5A02G058600 , TraesCS5A02G378300 , TraesCS5A02G378300 , TraesCS3B02G140700 , TraesCS1A02G118400 , TraesCS1A02G118400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G393500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ca2+ sensors group(PubMedID : 30367619)@EF hand family protein, putative, expressed K02183: calmodulin
2 Sobic.003G202200 uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
3 Sobic.003G144900 expressed protein -
4 Sobic.001G481100 DUF581 domain containing protein, expressed -
5 Sobic.001G387900 Chaperone - similar to Cluster: DnaJ domain containing protein(PubMedID : 24655390)@ Oryza sativa(PubMedID : 27586543)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 24655390)@chaperone protein dnaJ, putative, expressed -
6 Sobic.004G304625 - K15095: (+)-neomenthol dehydrogenase
7 Sobic.004G141200 cytochrome P450, putative, expressed K00487: trans-cinnamate 4-monooxygenase
8 Sobic.004G301000 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
9 Sobic.005G011300 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.004G171400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
11 Sobic.003G279500 serine acetyltransferase 1(PubMedID : 26465154)@serine acetyltransferase protein, putative, expressed K00640: serine O-acetyltransferase
12 Sobic.003G382800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
13 Sobic.007G214600 EF hand family protein, putative, expressed -
14 Sobic.001G138600 VQ domain containing protein, putative, expressed -
15 Sobic.010G274900 serine/threonine-protein kinase Cx32, chloroplast precursor, putative, expressed -
16 Sobic.001G308300 expressed protein -
17 Sobic.003G355100 expressed protein -
18 Sobic.004G100700 ethylene-responsive transcription factor TINY, putative, expressed K09286: EREBP-like factor
19 Sobic.001G108200 expressed protein -
20 Sobic.004G055200 phosphoglycerate kinase protein, putative, expressed K00927: PGK, phosphoglycerate kinase


Gene co-expression network
sample Sobic010G180600 Sobic010G180600 Sobic001G393500 Sobic001G393500 Sobic010G180600--Sobic001G393500 Sobic003G202200 Sobic003G202200 Sobic010G180600--Sobic003G202200 Sobic003G144900 Sobic003G144900 Sobic010G180600--Sobic003G144900 Sobic001G481100 Sobic001G481100 Sobic010G180600--Sobic001G481100 Sobic001G387900 Sobic001G387900 Sobic010G180600--Sobic001G387900 Sobic004G304625 Sobic004G304625 Sobic010G180600--Sobic004G304625 Sobic004G141200 Sobic004G141200 Sobic010G180600--Sobic004G141200 Sobic004G301000 Sobic004G301000 Sobic010G180600--Sobic004G301000 Sobic005G011300 Sobic005G011300 Sobic010G180600--Sobic005G011300 Sobic003G279300 Sobic003G279300 Sobic001G393500--Sobic003G279300 Sobic001G499300 Sobic001G499300 Sobic001G393500--Sobic001G499300 Sobic004G243100 Sobic004G243100 Sobic001G393500--Sobic004G243100 Sobic001G018300 Sobic001G018300 Sobic001G393500--Sobic001G018300 Sobic006G056400 Sobic006G056400 Sobic001G393500--Sobic006G056400 Sobic003G279500 Sobic003G279500 Sobic001G393500--Sobic003G279500 Sobic002G251000 Sobic002G251000 Sobic001G393500--Sobic002G251000 Sobic001G393500--Sobic003G202200 Sobic004G187900 Sobic004G187900 Sobic001G393500--Sobic004G187900 Sobic003G202200--Sobic001G481100 Sobic009G247900 Sobic009G247900 Sobic003G202200--Sobic009G247900 Sobic001G383700 Sobic001G383700 Sobic003G202200--Sobic001G383700 Sobic001G449700 Sobic001G449700 Sobic003G202200--Sobic001G449700 Sobic003G021500 Sobic003G021500 Sobic003G202200--Sobic003G021500 Sobic003G228900 Sobic003G228900 Sobic003G202200--Sobic003G228900 Sobic004G191400 Sobic004G191400 Sobic003G202200--Sobic004G191400 Sobic003G364600 Sobic003G364600 Sobic003G202200--Sobic003G364600 Sobic009G036000 Sobic009G036000 Sobic003G202200--Sobic009G036000 Sobic001G477300 Sobic001G477300 Sobic003G144900--Sobic001G477300 Sobic004G171400 Sobic004G171400 Sobic003G144900--Sobic004G171400 Sobic001G367600 Sobic001G367600 Sobic003G144900--Sobic001G367600 Sobic002G192000 Sobic002G192000 Sobic003G144900--Sobic002G192000 Sobic009G159400 Sobic009G159400 Sobic003G144900--Sobic009G159400 Sobic009G023200 Sobic009G023200 Sobic003G144900--Sobic009G023200 Sobic003G144900--Sobic001G481100 Sobic007G074000 Sobic007G074000 Sobic003G144900--Sobic007G074000 Sobic003G393700 Sobic003G393700 Sobic003G144900--Sobic003G393700 Sobic001G481100--Sobic003G228900 Sobic006G075400 Sobic006G075400 Sobic001G481100--Sobic006G075400 Sobic001G318700 Sobic001G318700 Sobic001G481100--Sobic001G318700 Sobic001G481100--Sobic007G074000 Sobic001G256700 Sobic001G256700 Sobic001G481100--Sobic001G256700 Sobic001G481100--Sobic003G202200 Sobic001G079300 Sobic001G079300 Sobic001G481100--Sobic001G079300 Sobic001G481100--Sobic004G301000 Sobic001G481100--Sobic002G251000 Sobic001G108200 Sobic001G108200 Sobic001G387900--Sobic001G108200 Sobic001G308300 Sobic001G308300 Sobic001G387900--Sobic001G308300 Sobic001G387900--Sobic004G141200 Sobic003G382800 Sobic003G382800 Sobic001G387900--Sobic003G382800 Sobic003G086600 Sobic003G086600 Sobic001G387900--Sobic003G086600 Sobic006G158600 Sobic006G158600 Sobic001G387900--Sobic006G158600 Sobic003G078100 Sobic003G078100 Sobic001G387900--Sobic003G078100 Sobic003G369100 Sobic003G369100 Sobic001G387900--Sobic003G369100 Sobic001G387900--Sobic004G304625 Sobic004G304625--Sobic004G141200 Sobic004G304625--Sobic001G108200 Sobic002G188900 Sobic002G188900 Sobic004G304625--Sobic002G188900 Sobic004G304625--Sobic003G369100 Sobic001G140900 Sobic001G140900 Sobic004G304625--Sobic001G140900 Sobic007G036900 Sobic007G036900 Sobic004G304625--Sobic007G036900 Sobic003G393900 Sobic003G393900 Sobic004G304625--Sobic003G393900 Sobic003G033900 Sobic003G033900 Sobic004G304625--Sobic003G033900 Sobic007G057000 Sobic007G057000 Sobic004G304625--Sobic007G057000 Sobic004G141200--Sobic003G369100 Sobic004G141200--Sobic001G108200 Sobic004G141200--Sobic007G074000 Sobic004G141200--Sobic003G393900 Sobic001G459800 Sobic001G459800 Sobic004G141200--Sobic001G459800 Sobic004G141200--Sobic004G304625 Sobic001G138600 Sobic001G138600 Sobic004G141200--Sobic001G138600 Sobic001G391500 Sobic001G391500 Sobic004G141200--Sobic001G391500 Sobic004G100700 Sobic004G100700 Sobic004G141200--Sobic004G100700 Sobic004G301000--Sobic004G100700 Sobic004G301000--Sobic001G108200 Sobic004G301000--Sobic001G481100 Sobic001G423800 Sobic001G423800 Sobic004G301000--Sobic001G423800 Sobic004G301000--Sobic002G188900 Sobic004G301000--Sobic004G141200 Sobic004G301000--Sobic005G011300 Sobic005G099000 Sobic005G099000 Sobic004G301000--Sobic005G099000 Sobic004G301000--Sobic002G251000 Sobic005G011300--Sobic004G100700 Sobic001G169500 Sobic001G169500 Sobic005G011300--Sobic001G169500 Sobic005G011300--Sobic002G188900 Sobic005G107900 Sobic005G107900 Sobic005G011300--Sobic005G107900 Sobic003G432700 Sobic003G432700 Sobic005G011300--Sobic003G432700 Sobic005G011300--Sobic004G141200 Sobic005G011300--Sobic001G140900 Sobic003G084400 Sobic003G084400 Sobic005G011300--Sobic003G084400 Sobic005G011300--Sobic004G171400
Octagon: transcription factors


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