Gene annotation
Transcriptome id Sobic.010G184500.1
Synonym Sb10g023500
Functional annotation NADP-dependent oxidoreductase, putative, expressed
UniProt C5Z5M2
Pfam PF00107 PF16884
Panther DB PTHR11695 PTHR11695:SF518
NCBI CDD KOG1196; Predicted NAD-dependent oxidoreductase
KEGG Orthology K07119; PTGR3, prostaglandin reductase 3
Gene Ontology GO:0016491; oxidoreductase activity GO:0008270zinc ion binding


Orthologs (automatic annotation)
TAIR AT5G16990 : Zinc-binding dehydrogenase family protein
RAP-DB (Rice) LOC_Os06g40070.1 : NADP-dependent oxidoreductase, putative, expressed
MaizeGDB (Corn) Zm00025a051274 , Zm00025a051273
Brachypodium PNT75680 , PNT75681 , KQK17771
Barley HORVU3Hr1G015640.5 , HORVU3Hr1G015640.4 , HORVU3Hr1G015640.7 , HORVU3Hr1G015640.1 , HORVU3Hr1G015640.3 , HORVU3Hr1G015640.2 , HORVU3Hr1G015680.1 , HORVU3Hr1G015680.3 , HORVU3Hr1G015680.2 , HORVU7Hr1G083970.1 , HORVU7Hr1G083970.2
Wheat TraesCS7A02G374800 , TraesCS7D02G348600 , TraesCS3B02G102600 , TraesCS7B02G252600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G428600 nodulation-signaling pathway 2 protein, putative, expressed -
2 Sobic.001G108800 expressed protein -
3 Sobic.004G011100 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.001G176300 cytochrome P450, putative, expressed -
5 Sobic.003G053300 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
6 Sobic.010G252401 - K14488: SAUR family protein
7 Sobic.001G039200 expressed protein -
8 Sobic.006G150700 DEF12 - Defensin and Defensin-like DEFL family, expressed -
9 Sobic.004G310200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@receptor-like protein kinase like protein, putative, expressed -
10 Sobic.005G013600 WRKY46, expressed -
11 Sobic.009G035300 expressed protein -
12 Sobic.001G075300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
13 Sobic.001G304100 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
14 Sobic.010G083400 gibberellin receptor GID1L2, putative, expressed -
15 Sobic.001G052500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
16 Sobic.008G050500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
17 Sobic.005G213600 Deletion of the Low Germination Stimulant 1 (LGS1) gene gives a Striga‐resistance trait in sorghum. Strigolactone precursor 18-hydroxycarlactonoic acid (18-OH-CLA) is a substrate for LGS1.(PubMedID : 34525227)@sulfotransferase domain containing protein, expressed -
18 Sobic.005G073000 stress responsive protein, putative, expressed -
19 Sobic.006G097000 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
20 Sobic.002G425000 VQ domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic010G184500 Sobic010G184500 Sobic001G428600 Sobic001G428600 Sobic010G184500--Sobic001G428600 Sobic001G108800 Sobic001G108800 Sobic010G184500--Sobic001G108800 Sobic004G011100 Sobic004G011100 Sobic010G184500--Sobic004G011100 Sobic001G176300 Sobic001G176300 Sobic010G184500--Sobic001G176300 Sobic003G053300 Sobic003G053300 Sobic010G184500--Sobic003G053300 Sobic010G252401 Sobic010G252401 Sobic010G184500--Sobic010G252401 Sobic001G039200 Sobic001G039200 Sobic010G184500--Sobic001G039200 Sobic006G150700 Sobic006G150700 Sobic010G184500--Sobic006G150700 Sobic004G310200 Sobic004G310200 Sobic010G184500--Sobic004G310200 Sobic006G202600 Sobic006G202600 Sobic001G428600--Sobic006G202600 Sobic001G508532 Sobic001G508532 Sobic001G428600--Sobic001G508532 Sobic001G237900 Sobic001G237900 Sobic001G428600--Sobic001G237900 Sobic010G196000 Sobic010G196000 Sobic001G428600--Sobic010G196000 Sobic008G127933 Sobic008G127933 Sobic001G428600--Sobic008G127933 Sobic005G213600 Sobic005G213600 Sobic001G428600--Sobic005G213600 Sobic001G428600--Sobic003G053300 Sobic006G158400 Sobic006G158400 Sobic001G428600--Sobic006G158400 Sobic010G158500 Sobic010G158500 Sobic001G428600--Sobic010G158500 Sobic001G500000 Sobic001G500000 Sobic001G108800--Sobic001G500000 Sobic001G108800--Sobic004G310200 Sobic003G192100 Sobic003G192100 Sobic001G108800--Sobic003G192100 Sobic009G074100 Sobic009G074100 Sobic001G108800--Sobic009G074100 Sobic001G231700 Sobic001G231700 Sobic001G108800--Sobic001G231700 Sobic003G084400 Sobic003G084400 Sobic001G108800--Sobic003G084400 Sobic005G093000 Sobic005G093000 Sobic001G108800--Sobic005G093000 Sobic001G192600 Sobic001G192600 Sobic001G108800--Sobic001G192600 Sobic004G340900 Sobic004G340900 Sobic001G108800--Sobic004G340900 Sobic005G203200 Sobic005G203200 Sobic004G011100--Sobic005G203200 Sobic003G255500 Sobic003G255500 Sobic004G011100--Sobic003G255500 Sobic001G161500 Sobic001G161500 Sobic004G011100--Sobic001G161500 Sobic009G035300 Sobic009G035300 Sobic004G011100--Sobic009G035300 Sobic001G416200 Sobic001G416200 Sobic004G011100--Sobic001G416200 Sobic001G302600 Sobic001G302600 Sobic004G011100--Sobic001G302600 Sobic004G349125 Sobic004G349125 Sobic004G011100--Sobic004G349125 Sobic005G080400 Sobic005G080400 Sobic004G011100--Sobic005G080400 Sobic005G010100 Sobic005G010100 Sobic004G011100--Sobic005G010100 Sobic001G176300--Sobic001G039200 Sobic001G348300 Sobic001G348300 Sobic001G176300--Sobic001G348300 Sobic001G348500 Sobic001G348500 Sobic001G176300--Sobic001G348500 Sobic001G176300--Sobic006G150700 Sobic001G176300--Sobic003G053300 Sobic009G088900 Sobic009G088900 Sobic001G176300--Sobic009G088900 Sobic001G176300--Sobic009G035300 Sobic001G340400 Sobic001G340400 Sobic001G176300--Sobic001G340400 Sobic005G073000 Sobic005G073000 Sobic001G176300--Sobic005G073000 Sobic003G053300--Sobic001G237900 Sobic002G213600 Sobic002G213600 Sobic003G053300--Sobic002G213600 Sobic003G053300--Sobic005G073000 Sobic001G304100 Sobic001G304100 Sobic003G053300--Sobic001G304100 Sobic002G425000 Sobic002G425000 Sobic003G053300--Sobic002G425000 Sobic004G295100 Sobic004G295100 Sobic003G053300--Sobic004G295100 Sobic002G124500 Sobic002G124500 Sobic003G053300--Sobic002G124500 Sobic001G238400 Sobic001G238400 Sobic003G053300--Sobic001G238400 Sobic003G053400 Sobic003G053400 Sobic003G053300--Sobic003G053400 Sobic010G252401--Sobic004G310200 Sobic002G003800 Sobic002G003800 Sobic010G252401--Sobic002G003800 Sobic009G181800 Sobic009G181800 Sobic010G252401--Sobic009G181800 Sobic004G042000 Sobic004G042000 Sobic010G252401--Sobic004G042000 Sobic003G319500 Sobic003G319500 Sobic010G252401--Sobic003G319500 Sobic010G252401--Sobic001G500000 Sobic004G046200 Sobic004G046200 Sobic010G252401--Sobic004G046200 Sobic010G184800 Sobic010G184800 Sobic010G252401--Sobic010G184800 Sobic001G139100 Sobic001G139100 Sobic010G252401--Sobic001G139100 Sobic001G039200--Sobic001G340400 Sobic001G039200--Sobic006G150700 Sobic008G144600 Sobic008G144600 Sobic001G039200--Sobic008G144600 Sobic001G039200--Sobic001G176300 Sobic005G014000 Sobic005G014000 Sobic001G039200--Sobic005G014000 Sobic001G039200--Sobic003G053300 Sobic001G039200--Sobic001G348300 Sobic005G063300 Sobic005G063300 Sobic001G039200--Sobic005G063300 Sobic001G039200--Sobic009G035300 Sobic003G016100 Sobic003G016100 Sobic006G150700--Sobic003G016100 Sobic006G150700--Sobic002G213600 Sobic006G150700--Sobic008G144600 Sobic006G150700--Sobic003G053300 Sobic006G150700--Sobic002G003800 Sobic003G316000 Sobic003G316000 Sobic006G150700--Sobic003G316000 Sobic010G212500 Sobic010G212500 Sobic006G150700--Sobic010G212500 Sobic006G249300 Sobic006G249300 Sobic006G150700--Sobic006G249300 Sobic006G150700--Sobic009G035300 Sobic004G310200--Sobic002G003800 Sobic003G311800 Sobic003G311800 Sobic004G310200--Sobic003G311800 Sobic004G310200--Sobic004G042000 Sobic004G310200--Sobic001G304100 Sobic001G049900 Sobic001G049900 Sobic004G310200--Sobic001G049900 Sobic004G310200--Sobic001G500000 Sobic004G310200--Sobic010G252401 Sobic004G310200--Sobic002G213600 Sobic004G310200--Sobic003G084400
Octagon: transcription factors


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