Gene annotation
Transcriptome id Sobic.010G218400.1
Synonym VHA-A, Sb10g026440
Functional annotation ATP synthase, putative, expressed
UniProt C5Z7B5
Pfam PF02874 PF00306 PF16886 PF00006
Panther DB PTHR15184 PTHR15184:SF7
NCBI CDD -
KEGG Orthology K02145; ATPeV1A, V-type H+-transporting ATPase subunit A
Gene Ontology GO:0005524; ATP binding


Orthologs (automatic annotation)
TAIR AT1G78900 : vacuolar ATP synthase subunit A
RAP-DB (Rice) LOC_Os06g45120.1 : ATP synthase, putative, expressed
MaizeGDB (Corn) Zm00025a034768 , Zm00025a019137
Brachypodium KQK16969 , KQJ93593
Barley HORVU7Hr1G109770.8 , HORVU7Hr1G109770.2 , HORVU7Hr1G109770.7 , HORVU7Hr1G109770.6 , HORVU7Hr1G109770.5 , HORVU7Hr1G109770.3 , HORVU7Hr1G109770.1 , HORVU7Hr1G109770.4
Wheat TraesCS7B02G392600 , TraesCS7A02G489500 , TraesCS7A02G489500 , TraesCS7D02G475900 , TraesCS7D02G475900
Populus -


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cDNA sequences
Sobic.010G218400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G435400 vacuolar ATP synthase 98 kDa subunit, putative, expressed K02154: ATPeV0A, V-type H+-transporting ATPase subunit a
2 Sobic.004G060100 ATP synthase, putative, expressed K02145: ATPeV1A, V-type H+-transporting ATPase subunit A
3 Sobic.008G021200 vacuolar ATP synthase subunit C, putative, expressed K02148: ATPeV1C, V-type H+-transporting ATPase subunit C
4 Sobic.007G162100 TENA/THI-4 family protein, putative, expressed -
5 Sobic.005G018800 expressed protein -
6 Sobic.002G426300 actin, putative, expressed K17260: ACTR2, actin-related protein 2
7 Sobic.006G260500 expressed protein -
8 Sobic.006G077300 expressed protein K17637: EXOC2, exocyst complex component 2
9 Sobic.009G243800 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
10 Sobic.002G291400 nicotinate-nucleotide pyrophosphorylase, putative, expressed K00767: nadC, nicotinate-nucleotide pyrophosphorylase (carboxylating)
11 Sobic.004G096700 xaa-Pro dipeptidase, putative, expressed K14213: Xaa-Pro dipeptidase
12 Sobic.006G147600 L-allo-threonine aldolase, putative, expressed K01620: threonine aldolase
13 Sobic.006G157600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Thireodoxin family protein (Os)(PubMedID : 27208977)@thioredoxin, putative, expressed K03671: thioredoxin 1
14 Sobic.001G447300 ATP-binding cassette sub-family E member 1, putative, expressed K06174: ABCE1, ATP-binding cassette, sub-family E, member 1
15 Sobic.001G056800 GTP binding protein, putative, expressed -
16 Sobic.003G200800 vacuolar ATP synthase subunit d, putative, expressed K02146: ATPeV0D, V-type H+-transporting ATPase subunit d
17 Sobic.010G205200 Ser/Thr protein phosphatase family protein, putative, expressed -
18 Sobic.002G335600 eukaryotic translation initiation factor 4G, putative, expressed K03260: translation initiation factor 4G
19 Sobic.005G034700 PHD-finger family protein, expressed -
20 Sobic.001G301200 pattern formation protein EMB30, putative, expressed K18443: golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1


Gene co-expression network
sample Sobic010G218400 Sobic010G218400 Sobic001G435400 Sobic001G435400 Sobic010G218400--Sobic001G435400 Sobic004G060100 Sobic004G060100 Sobic010G218400--Sobic004G060100 Sobic008G021200 Sobic008G021200 Sobic010G218400--Sobic008G021200 Sobic007G162100 Sobic007G162100 Sobic010G218400--Sobic007G162100 Sobic005G018800 Sobic005G018800 Sobic010G218400--Sobic005G018800 Sobic002G426300 Sobic002G426300 Sobic010G218400--Sobic002G426300 Sobic006G260500 Sobic006G260500 Sobic010G218400--Sobic006G260500 Sobic006G077300 Sobic006G077300 Sobic010G218400--Sobic006G077300 Sobic009G243800 Sobic009G243800 Sobic010G218400--Sobic009G243800 Sobic001G435400--Sobic007G162100 Sobic006G127600 Sobic006G127600 Sobic001G435400--Sobic006G127600 Sobic004G094700 Sobic004G094700 Sobic001G435400--Sobic004G094700 Sobic001G283600 Sobic001G283600 Sobic001G435400--Sobic001G283600 Sobic006G039400 Sobic006G039400 Sobic001G435400--Sobic006G039400 Sobic008G033500 Sobic008G033500 Sobic001G435400--Sobic008G033500 Sobic001G435400--Sobic004G060100 Sobic001G435400--Sobic008G021200 Sobic001G435400--Sobic005G018800 Sobic004G060100--Sobic008G021200 Sobic007G161200 Sobic007G161200 Sobic004G060100--Sobic007G161200 Sobic004G060100--Sobic005G018800 Sobic009G256000 Sobic009G256000 Sobic004G060100--Sobic009G256000 Sobic003G200800 Sobic003G200800 Sobic004G060100--Sobic003G200800 Sobic004G283600 Sobic004G283600 Sobic004G060100--Sobic004G283600 Sobic005G004100 Sobic005G004100 Sobic004G060100--Sobic005G004100 Sobic002G321400 Sobic002G321400 Sobic004G060100--Sobic002G321400 Sobic004G060100--Sobic001G435400 Sobic008G021200--Sobic005G018800 Sobic008G021200--Sobic004G060100 Sobic008G021200--Sobic003G200800 Sobic008G021200--Sobic009G256000 Sobic008G021200--Sobic007G161200 Sobic008G021200--Sobic004G283600 Sobic006G237200 Sobic006G237200 Sobic008G021200--Sobic006G237200 Sobic008G021200--Sobic005G004100 Sobic008G021200--Sobic002G321400 Sobic007G162100--Sobic006G127600 Sobic007G162100--Sobic001G283600 Sobic009G084900 Sobic009G084900 Sobic007G162100--Sobic009G084900 Sobic007G162100--Sobic001G435400 Sobic003G189600 Sobic003G189600 Sobic007G162100--Sobic003G189600 Sobic010G020400 Sobic010G020400 Sobic007G162100--Sobic010G020400 Sobic003G264100 Sobic003G264100 Sobic007G162100--Sobic003G264100 Sobic007G132100 Sobic007G132100 Sobic007G162100--Sobic007G132100 Sobic009G192300 Sobic009G192300 Sobic007G162100--Sobic009G192300 Sobic005G018800--Sobic003G200800 Sobic005G018800--Sobic008G021200 Sobic005G018800--Sobic004G060100 Sobic005G018800--Sobic007G161200 Sobic005G018800--Sobic009G256000 Sobic001G115700 Sobic001G115700 Sobic005G018800--Sobic001G115700 Sobic005G018800--Sobic004G283600 Sobic001G304000 Sobic001G304000 Sobic005G018800--Sobic001G304000 Sobic005G018800--Sobic005G004100 Sobic005G090300 Sobic005G090300 Sobic002G426300--Sobic005G090300 Sobic003G114400 Sobic003G114400 Sobic002G426300--Sobic003G114400 Sobic010G273900 Sobic010G273900 Sobic002G426300--Sobic010G273900 Sobic004G096700 Sobic004G096700 Sobic002G426300--Sobic004G096700 Sobic002G426300--Sobic006G260500 Sobic001G056800 Sobic001G056800 Sobic002G426300--Sobic001G056800 Sobic005G062200 Sobic005G062200 Sobic002G426300--Sobic005G062200 Sobic002G265300 Sobic002G265300 Sobic002G426300--Sobic002G265300 Sobic009G000100 Sobic009G000100 Sobic002G426300--Sobic009G000100 Sobic006G260500--Sobic003G114400 Sobic006G260500--Sobic006G077300 Sobic004G241900 Sobic004G241900 Sobic006G260500--Sobic004G241900 Sobic003G209200 Sobic003G209200 Sobic006G260500--Sobic003G209200 Sobic010G223300 Sobic010G223300 Sobic006G260500--Sobic010G223300 Sobic006G260500--Sobic005G062200 Sobic007G005500 Sobic007G005500 Sobic006G260500--Sobic007G005500 Sobic007G075500 Sobic007G075500 Sobic006G260500--Sobic007G075500 Sobic006G021700 Sobic006G021700 Sobic006G260500--Sobic006G021700 Sobic006G077300--Sobic006G260500 Sobic006G077300--Sobic006G021700 Sobic006G077300--Sobic003G209200 Sobic006G077300--Sobic001G056800 Sobic002G401500 Sobic002G401500 Sobic006G077300--Sobic002G401500 Sobic006G077300--Sobic003G114400 Sobic006G077300--Sobic007G005500 Sobic006G077300--Sobic005G062200 Sobic002G042600 Sobic002G042600 Sobic006G077300--Sobic002G042600 Sobic001G534800 Sobic001G534800 Sobic009G243800--Sobic001G534800 Sobic005G003300 Sobic005G003300 Sobic009G243800--Sobic005G003300 Sobic010G232600 Sobic010G232600 Sobic009G243800--Sobic010G232600 Sobic002G270500 Sobic002G270500 Sobic009G243800--Sobic002G270500 Sobic001G413900 Sobic001G413900 Sobic009G243800--Sobic001G413900 Sobic008G003700 Sobic008G003700 Sobic009G243800--Sobic008G003700 Sobic001G281100 Sobic001G281100 Sobic009G243800--Sobic001G281100 Sobic004G004300 Sobic004G004300 Sobic009G243800--Sobic004G004300 Sobic006G126100 Sobic006G126100 Sobic009G243800--Sobic006G126100
Octagon: transcription factors


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