Gene annotation
Transcriptome id Sobic.009G243800.2
Synonym Sb09g029520
Functional annotation transporter family protein, putative, expressed
UniProt C5YWE2
Pfam PF07690
Panther DB PTHR23500 PTHR23500:SF114
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology K08145; SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G19450 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os05g50280.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a036694
Brachypodium KQK04651
Barley HORVU1Hr1G091460.1 , HORVU1Hr1G091460.3 , HORVU1Hr1G091460.2
Wheat TraesCS1B02G448300 , TraesCS1D02G426000 , TraesCS1A02G418300
Populus -


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cDNA sequences
Sobic.009G243800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G534800 Putative ortholog gene associated with awn presence/absence in wheat(PubMedID : 25237112)@adapitin protein, putative, expressed K11824: AP-2 complex subunit alpha
2 Sobic.005G003300 clathrin heavy chain, putative, expressed K04646: clathrin heavy chain
3 Sobic.010G232600 solute carrier family 35 member F5, putative, expressed K15289: solute carrier family 35, member F5
4 Sobic.002G270500 UBX domain-containing protein, putative, expressed -
5 Sobic.001G413900 "Ca ATPase, IIB type"(PubMedID : 22196357)@calcium-transporting ATPase, endoplasmic reticulum-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
6 Sobic.008G003700 clathrin heavy chain, putative, expressed K04646: clathrin heavy chain
7 Sobic.001G281100 START domain containing protein, expressed -
8 Sobic.004G004300 expressed protein -
9 Sobic.006G126100 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
10 Sobic.004G039600 proteasome/cyclosome repeat containing protein, expressed K03028: PSMD2, 26S proteasome regulatory subunit N1
11 Sobic.004G236200 SEC6, putative, expressed K06110: EXOC3, exocyst complex component 3
12 Sobic.001G415300 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
13 Sobic.006G131000 expressed protein K11968: ariadne-1
14 Sobic.003G427600 villin protein, putative, expressed -
15 Sobic.001G426600 SH3 domain containing protein, expressed -
16 Sobic.001G404600 expressed protein K18270: Rab3 GTPase-activating protein catalytic subunit
17 Sobic.001G347500 expressed protein -
18 Sobic.003G337300 HEAT repeat family protein, putative, expressed K08876: SCY1-like protein 1
19 Sobic.008G099800 expressed protein -
20 Sobic.001G233700 transmembrane protein-related, putative, expressed -


Gene co-expression network
sample Sobic009G243800 Sobic009G243800 Sobic001G534800 Sobic001G534800 Sobic009G243800--Sobic001G534800 Sobic005G003300 Sobic005G003300 Sobic009G243800--Sobic005G003300 Sobic010G232600 Sobic010G232600 Sobic009G243800--Sobic010G232600 Sobic002G270500 Sobic002G270500 Sobic009G243800--Sobic002G270500 Sobic001G413900 Sobic001G413900 Sobic009G243800--Sobic001G413900 Sobic008G003700 Sobic008G003700 Sobic009G243800--Sobic008G003700 Sobic001G281100 Sobic001G281100 Sobic009G243800--Sobic001G281100 Sobic004G004300 Sobic004G004300 Sobic009G243800--Sobic004G004300 Sobic006G126100 Sobic006G126100 Sobic009G243800--Sobic006G126100 Sobic001G534800--Sobic001G281100 Sobic008G099800 Sobic008G099800 Sobic001G534800--Sobic008G099800 Sobic001G534800--Sobic004G004300 Sobic004G135400 Sobic004G135400 Sobic001G534800--Sobic004G135400 Sobic001G534800--Sobic005G003300 Sobic005G026200 Sobic005G026200 Sobic001G534800--Sobic005G026200 Sobic006G012500 Sobic006G012500 Sobic001G534800--Sobic006G012500 Sobic004G113400 Sobic004G113400 Sobic001G534800--Sobic004G113400 Sobic001G065000 Sobic001G065000 Sobic001G534800--Sobic001G065000 Sobic005G003300--Sobic001G534800 Sobic005G003300--Sobic005G026200 Sobic005G003300--Sobic004G135400 Sobic005G003300--Sobic004G004300 Sobic008G004600 Sobic008G004600 Sobic005G003300--Sobic008G004600 Sobic005G003300--Sobic006G126100 Sobic005G003300--Sobic008G003700 Sobic005G003300--Sobic008G099800 Sobic004G039600 Sobic004G039600 Sobic005G003300--Sobic004G039600 Sobic010G232600--Sobic006G126100 Sobic010G232600--Sobic004G004300 Sobic010G232600--Sobic001G281100 Sobic010G232600--Sobic004G135400 Sobic001G415300 Sobic001G415300 Sobic010G232600--Sobic001G415300 Sobic001G050200 Sobic001G050200 Sobic010G232600--Sobic001G050200 Sobic004G261600 Sobic004G261600 Sobic010G232600--Sobic004G261600 Sobic004G351100 Sobic004G351100 Sobic010G232600--Sobic004G351100 Sobic004G178200 Sobic004G178200 Sobic010G232600--Sobic004G178200 Sobic007G024700 Sobic007G024700 Sobic002G270500--Sobic007G024700 Sobic001G207400 Sobic001G207400 Sobic002G270500--Sobic001G207400 Sobic004G355000 Sobic004G355000 Sobic002G270500--Sobic004G355000 Sobic005G157000 Sobic005G157000 Sobic002G270500--Sobic005G157000 Sobic002G430000 Sobic002G430000 Sobic002G270500--Sobic002G430000 Sobic009G126900 Sobic009G126900 Sobic002G270500--Sobic009G126900 Sobic009G094300 Sobic009G094300 Sobic002G270500--Sobic009G094300 Sobic002G270500--Sobic004G113400 Sobic004G269200 Sobic004G269200 Sobic002G270500--Sobic004G269200 Sobic001G413900--Sobic001G534800 Sobic002G156000 Sobic002G156000 Sobic001G413900--Sobic002G156000 Sobic001G413900--Sobic001G281100 Sobic004G002100 Sobic004G002100 Sobic001G413900--Sobic004G002100 Sobic004G236200 Sobic004G236200 Sobic001G413900--Sobic004G236200 Sobic004G209800 Sobic004G209800 Sobic001G413900--Sobic004G209800 Sobic001G413900--Sobic001G065000 Sobic001G056800 Sobic001G056800 Sobic001G413900--Sobic001G056800 Sobic003G229500 Sobic003G229500 Sobic001G413900--Sobic003G229500 Sobic008G003700--Sobic005G003300 Sobic004G344901 Sobic004G344901 Sobic008G003700--Sobic004G344901 Sobic007G075500 Sobic007G075500 Sobic008G003700--Sobic007G075500 Sobic001G404600 Sobic001G404600 Sobic008G003700--Sobic001G404600 Sobic008G124800 Sobic008G124800 Sobic008G003700--Sobic008G124800 Sobic003G029600 Sobic003G029600 Sobic008G003700--Sobic003G029600 Sobic003G337300 Sobic003G337300 Sobic008G003700--Sobic003G337300 Sobic008G003700--Sobic004G261600 Sobic007G054800 Sobic007G054800 Sobic008G003700--Sobic007G054800 Sobic001G281100--Sobic001G534800 Sobic001G281100--Sobic004G004300 Sobic001G281100--Sobic001G065000 Sobic001G281100--Sobic005G026200 Sobic001G281100--Sobic008G099800 Sobic001G281100--Sobic003G229500 Sobic001G281100--Sobic006G012500 Sobic004G072100 Sobic004G072100 Sobic001G281100--Sobic004G072100 Sobic010G275500 Sobic010G275500 Sobic001G281100--Sobic010G275500 Sobic004G004300--Sobic001G281100 Sobic004G004300--Sobic005G026200 Sobic004G004300--Sobic001G534800 Sobic004G004300--Sobic006G126100 Sobic001G117200 Sobic001G117200 Sobic004G004300--Sobic001G117200 Sobic004G004200 Sobic004G004200 Sobic004G004300--Sobic004G004200 Sobic004G004300--Sobic001G415300 Sobic004G004300--Sobic010G275500 Sobic004G004300--Sobic005G003300 Sobic006G126100--Sobic004G004300 Sobic006G126100--Sobic008G004600 Sobic006G126100--Sobic004G039600 Sobic006G126100--Sobic001G534800 Sobic003G104000 Sobic003G104000 Sobic006G126100--Sobic003G104000 Sobic006G126100--Sobic006G012500 Sobic006G126100--Sobic004G135400 Sobic007G132100 Sobic007G132100 Sobic006G126100--Sobic007G132100 Sobic006G208500 Sobic006G208500 Sobic006G126100--Sobic006G208500
Octagon: transcription factors


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