Gene annotation
Transcriptome id Sobic.010G263900.1
Synonym Sb10g030000
Functional annotation expressed protein
UniProt C5Z1U1
Pfam PF07893
Panther DB PTHR33085 PTHR33085:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g05380.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G263900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G133400 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
2 Sobic.004G348100 DNL zinc finger domain containing protein, putative, expressed K17808: ZIM17, DNLZ, mitochondrial protein import protein ZIM17
3 Sobic.003G248600 26S protease regulatory subunit 7, putative, expressed K03061: PSMC2, 26S proteasome regulatory subunit T1
4 Sobic.006G242300 - -
5 Sobic.002G430800 ribosomal protein, putative, expressed K02981: RP-S2e, small subunit ribosomal protein S2e
6 Sobic.002G178601 - -
7 Sobic.001G467300 40S ribosomal protein S3a, putative, expressed K02984: RP-S3Ae, small subunit ribosomal protein S3Ae
8 Sobic.001G073000 expressed protein K09659: dolichol-phosphate mannosyltransferase subunit 3
9 Sobic.003G405900 mitochondrial import receptor subunit TOM20, putative, expressed -
10 Sobic.004G119200 splicing factor 3B subunit 5, putative, expressed K12832: SF3B5, splicing factor 3B subunit 5
11 Sobic.003G344900 selT-like protein precursor, putative, expressed -
12 Sobic.009G228800 dolichol phosphate-mannose biosynthesis regulatory protein, putative, expressed K09658: dolichol phosphate-mannose biosynthesis regulatory protein
13 Sobic.001G216200 transcription factor BTF3, putative, expressed K01527: EGD1, nascent polypeptide-associated complex subunit beta
14 Sobic.010G101500 skp1 family, tetramerisation domain containing protein, expressed K03872: ELOC, elongin-C
15 Sobic.002G119800 arginyl-tRNA synthetase, putative, expressed -
16 Sobic.009G028800 OsFBX115 - F-box domain containing protein, expressed -
17 Sobic.004G183400 expressed protein -
18 Sobic.002G393500 expressed protein -
19 Sobic.006G056600 ribosomal protein L4, putative, expressed K02926: RP-L4, MRPL4, large subunit ribosomal protein L4
20 Sobic.009G190300 Brix domain containing protein, putative, expressed K14847: ribosome production factor 2


Gene co-expression network
sample Sobic010G263900 Sobic010G263900 Sobic009G133400 Sobic009G133400 Sobic010G263900--Sobic009G133400 Sobic004G348100 Sobic004G348100 Sobic010G263900--Sobic004G348100 Sobic003G248600 Sobic003G248600 Sobic010G263900--Sobic003G248600 Sobic006G242300 Sobic006G242300 Sobic010G263900--Sobic006G242300 Sobic002G430800 Sobic002G430800 Sobic010G263900--Sobic002G430800 Sobic002G178601 Sobic002G178601 Sobic010G263900--Sobic002G178601 Sobic001G467300 Sobic001G467300 Sobic010G263900--Sobic001G467300 Sobic001G073000 Sobic001G073000 Sobic010G263900--Sobic001G073000 Sobic003G405900 Sobic003G405900 Sobic010G263900--Sobic003G405900 Sobic004G356900 Sobic004G356900 Sobic009G133400--Sobic004G356900 Sobic009G133400--Sobic006G242300 Sobic010G146600 Sobic010G146600 Sobic009G133400--Sobic010G146600 Sobic009G133400--Sobic004G348100 Sobic004G301900 Sobic004G301900 Sobic009G133400--Sobic004G301900 Sobic010G247400 Sobic010G247400 Sobic009G133400--Sobic010G247400 Sobic010G251100 Sobic010G251100 Sobic009G133400--Sobic010G251100 Sobic001G512600 Sobic001G512600 Sobic009G133400--Sobic001G512600 Sobic007G203700 Sobic007G203700 Sobic009G133400--Sobic007G203700 Sobic004G006300 Sobic004G006300 Sobic004G348100--Sobic004G006300 Sobic009G225200 Sobic009G225200 Sobic004G348100--Sobic009G225200 Sobic009G117300 Sobic009G117300 Sobic004G348100--Sobic009G117300 Sobic004G348100--Sobic009G133400 Sobic003G084700 Sobic003G084700 Sobic004G348100--Sobic003G084700 Sobic006G252300 Sobic006G252300 Sobic004G348100--Sobic006G252300 Sobic006G254700 Sobic006G254700 Sobic004G348100--Sobic006G254700 Sobic002G395801 Sobic002G395801 Sobic004G348100--Sobic002G395801 Sobic001G428400 Sobic001G428400 Sobic004G348100--Sobic001G428400 Sobic003G220600 Sobic003G220600 Sobic003G248600--Sobic003G220600 Sobic007G186300 Sobic007G186300 Sobic003G248600--Sobic007G186300 Sobic007G045600 Sobic007G045600 Sobic003G248600--Sobic007G045600 Sobic005G176000 Sobic005G176000 Sobic003G248600--Sobic005G176000 Sobic004G321900 Sobic004G321900 Sobic003G248600--Sobic004G321900 Sobic001G403700 Sobic001G403700 Sobic003G248600--Sobic001G403700 Sobic009G146100 Sobic009G146100 Sobic003G248600--Sobic009G146100 Sobic002G296300 Sobic002G296300 Sobic003G248600--Sobic002G296300 Sobic003G248600--Sobic001G073000 Sobic001G041200 Sobic001G041200 Sobic006G242300--Sobic001G041200 Sobic003G045400 Sobic003G045400 Sobic006G242300--Sobic003G045400 Sobic006G056600 Sobic006G056600 Sobic006G242300--Sobic006G056600 Sobic006G242300--Sobic009G133400 Sobic003G119400 Sobic003G119400 Sobic006G242300--Sobic003G119400 Sobic001G067900 Sobic001G067900 Sobic006G242300--Sobic001G067900 Sobic009G033900 Sobic009G033900 Sobic006G242300--Sobic009G033900 Sobic004G072800 Sobic004G072800 Sobic006G242300--Sobic004G072800 Sobic003G043100 Sobic003G043100 Sobic006G242300--Sobic003G043100 Sobic002G430800--Sobic002G178601 Sobic002G431600 Sobic002G431600 Sobic002G430800--Sobic002G431600 Sobic002G288900 Sobic002G288900 Sobic002G430800--Sobic002G288900 Sobic002G430800--Sobic010G263900 Sobic009G219900 Sobic009G219900 Sobic002G430800--Sobic009G219900 Sobic004G060600 Sobic004G060600 Sobic002G430800--Sobic004G060600 Sobic002G298300 Sobic002G298300 Sobic002G430800--Sobic002G298300 Sobic004G061800 Sobic004G061800 Sobic002G430800--Sobic004G061800 Sobic004G067100 Sobic004G067100 Sobic002G430800--Sobic004G067100 Sobic002G393500 Sobic002G393500 Sobic002G178601--Sobic002G393500 Sobic008G133600 Sobic008G133600 Sobic002G178601--Sobic008G133600 Sobic003G344900 Sobic003G344900 Sobic002G178601--Sobic003G344900 Sobic003G239800 Sobic003G239800 Sobic002G178601--Sobic003G239800 Sobic009G228800 Sobic009G228800 Sobic002G178601--Sobic009G228800 Sobic003G015900 Sobic003G015900 Sobic002G178601--Sobic003G015900 Sobic001G113000 Sobic001G113000 Sobic002G178601--Sobic001G113000 Sobic004G235000 Sobic004G235000 Sobic002G178601--Sobic004G235000 Sobic002G178601--Sobic002G430800 Sobic009G065400 Sobic009G065400 Sobic001G467300--Sobic009G065400 Sobic001G402300 Sobic001G402300 Sobic001G467300--Sobic001G402300 Sobic002G413400 Sobic002G413400 Sobic001G467300--Sobic002G413400 Sobic001G467300--Sobic001G073000 Sobic001G216200 Sobic001G216200 Sobic001G467300--Sobic001G216200 Sobic001G491100 Sobic001G491100 Sobic001G467300--Sobic001G491100 Sobic001G467300--Sobic003G248600 Sobic010G173100 Sobic010G173100 Sobic001G467300--Sobic010G173100 Sobic008G004000 Sobic008G004000 Sobic001G467300--Sobic008G004000 Sobic001G073000--Sobic009G228800 Sobic010G083700 Sobic010G083700 Sobic001G073000--Sobic010G083700 Sobic001G007200 Sobic001G007200 Sobic001G073000--Sobic001G007200 Sobic001G415500 Sobic001G415500 Sobic001G073000--Sobic001G415500 Sobic001G073000--Sobic007G186300 Sobic001G054200 Sobic001G054200 Sobic001G073000--Sobic001G054200 Sobic009G246950 Sobic009G246950 Sobic001G073000--Sobic009G246950 Sobic010G253800 Sobic010G253800 Sobic001G073000--Sobic010G253800 Sobic001G073000--Sobic003G248600 Sobic009G045800 Sobic009G045800 Sobic003G405900--Sobic009G045800 Sobic002G078400 Sobic002G078400 Sobic003G405900--Sobic002G078400 Sobic003G405900--Sobic001G491100 Sobic010G029400 Sobic010G029400 Sobic003G405900--Sobic010G029400 Sobic007G091000 Sobic007G091000 Sobic003G405900--Sobic007G091000 Sobic003G405900--Sobic006G242300 Sobic001G018200 Sobic001G018200 Sobic003G405900--Sobic001G018200 Sobic010G038700 Sobic010G038700 Sobic003G405900--Sobic010G038700 Sobic008G094600 Sobic008G094600 Sobic003G405900--Sobic008G094600
Octagon: transcription factors


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