Gene annotation
Transcriptome id Sobic.010G276000.1
Synonym Sb10g030990
Functional annotation RING-H2 finger protein, putative, expressed
UniProt C5Z2K8
Pfam PF13639
Panther DB PTHR14155 PTHR14155:SF74
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT1G20823 : RING/U-box superfamily protein
RAP-DB (Rice) LOC_Os02g58540.1 : RING-H2 finger protein, putative, expressed
MaizeGDB (Corn) Zm00025a041686
Brachypodium PNT75296
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G267000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
2 Sobic.004G096300 protein phosphatase 2C, putative, expressed -
3 Sobic.009G213400 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
4 Sobic.003G085700 expressed protein -
5 Sobic.006G174600 cis-zeatin O-glucosyltransferase, putative, expressed K13495: cis-zeatin O-glucosyltransferase
6 Sobic.007G148200 auxin-repressed protein, putative, expressed -
7 Sobic.004G275200 zinc-binding protein, putative, expressed -
8 Sobic.010G210600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
9 Sobic.010G245100 lectin-like receptor kinase 1, putative, expressed -
10 Sobic.001G293800 chloroplast beta-amylase(PubMedID : 26465154)@chloroplast beta-amylase(PubMedID : 26465154)@beta-amylase, putative, expressed K01177: beta-amylase
11 Sobic.006G152600 - -
12 Sobic.006G273000 AT hook motif domain containing protein, expressed -
13 Sobic.003G013600 expressed protein -
14 Sobic.010G157500 zinc finger protein, putative, expressed -
15 Sobic.001G377000 auxin-repressed protein, putative, expressed -
16 Sobic.006G053700 ACT domain containing protein, expressed -
17 Sobic.001G053900 nodulin, putative, expressed -
18 Sobic.003G391100 helix-loop-helix DNA-binding domain containing protein, expressed -
19 Sobic.001G465100 hydrolase, alpha/beta fold family domain containing protein, expressed -
20 Sobic.003G284300 expressed protein -


Gene co-expression network
sample Sobic010G276000 Sobic010G276000 Sobic010G267000 Sobic010G267000 Sobic010G276000--Sobic010G267000 Sobic004G096300 Sobic004G096300 Sobic010G276000--Sobic004G096300 Sobic009G213400 Sobic009G213400 Sobic010G276000--Sobic009G213400 Sobic003G085700 Sobic003G085700 Sobic010G276000--Sobic003G085700 Sobic006G174600 Sobic006G174600 Sobic010G276000--Sobic006G174600 Sobic007G148200 Sobic007G148200 Sobic010G276000--Sobic007G148200 Sobic004G275200 Sobic004G275200 Sobic010G276000--Sobic004G275200 Sobic010G210600 Sobic010G210600 Sobic010G276000--Sobic010G210600 Sobic010G245100 Sobic010G245100 Sobic010G276000--Sobic010G245100 Sobic003G013600 Sobic003G013600 Sobic010G267000--Sobic003G013600 Sobic003G123300 Sobic003G123300 Sobic010G267000--Sobic003G123300 Sobic001G293800 Sobic001G293800 Sobic010G267000--Sobic001G293800 Sobic010G267000--Sobic004G096300 Sobic010G267000--Sobic003G085700 Sobic010G267000--Sobic010G276000 Sobic001G465100 Sobic001G465100 Sobic010G267000--Sobic001G465100 Sobic001G182600 Sobic001G182600 Sobic010G267000--Sobic001G182600 Sobic010G246600 Sobic010G246600 Sobic010G267000--Sobic010G246600 Sobic010G172200 Sobic010G172200 Sobic004G096300--Sobic010G172200 Sobic004G096300--Sobic001G293800 Sobic001G377000 Sobic001G377000 Sobic004G096300--Sobic001G377000 Sobic004G096300--Sobic009G213400 Sobic003G264901 Sobic003G264901 Sobic004G096300--Sobic003G264901 Sobic006G053700 Sobic006G053700 Sobic004G096300--Sobic006G053700 Sobic001G053900 Sobic001G053900 Sobic004G096300--Sobic001G053900 Sobic007G014600 Sobic007G014600 Sobic004G096300--Sobic007G014600 Sobic008G152200 Sobic008G152200 Sobic004G096300--Sobic008G152200 Sobic009G213400--Sobic010G245100 Sobic009G213400--Sobic001G377000 Sobic009G213400--Sobic004G096300 Sobic006G273000 Sobic006G273000 Sobic009G213400--Sobic006G273000 Sobic003G222300 Sobic003G222300 Sobic009G213400--Sobic003G222300 Sobic001G191200 Sobic001G191200 Sobic009G213400--Sobic001G191200 Sobic009G213400--Sobic006G053700 Sobic001G093600 Sobic001G093600 Sobic009G213400--Sobic001G093600 Sobic010G052500 Sobic010G052500 Sobic009G213400--Sobic010G052500 Sobic003G085700--Sobic003G013600 Sobic006G167800 Sobic006G167800 Sobic003G085700--Sobic006G167800 Sobic003G296300 Sobic003G296300 Sobic003G085700--Sobic003G296300 Sobic003G085700--Sobic010G267000 Sobic003G085700--Sobic007G148200 Sobic001G093900 Sobic001G093900 Sobic003G085700--Sobic001G093900 Sobic006G152600 Sobic006G152600 Sobic003G085700--Sobic006G152600 Sobic001G075000 Sobic001G075000 Sobic003G085700--Sobic001G075000 Sobic003G085700--Sobic003G123300 Sobic006G246200 Sobic006G246200 Sobic006G174600--Sobic006G246200 Sobic001G136300 Sobic001G136300 Sobic006G174600--Sobic001G136300 Sobic001G288100 Sobic001G288100 Sobic006G174600--Sobic001G288100 Sobic001G319100 Sobic001G319100 Sobic006G174600--Sobic001G319100 Sobic006G113400 Sobic006G113400 Sobic006G174600--Sobic006G113400 Sobic005G171100 Sobic005G171100 Sobic006G174600--Sobic005G171100 Sobic004G258400 Sobic004G258400 Sobic006G174600--Sobic004G258400 Sobic009G037200 Sobic009G037200 Sobic006G174600--Sobic009G037200 Sobic007G157100 Sobic007G157100 Sobic006G174600--Sobic007G157100 Sobic007G148200--Sobic001G377000 Sobic007G148200--Sobic004G275200 Sobic002G226000 Sobic002G226000 Sobic007G148200--Sobic002G226000 Sobic007G148200--Sobic006G152600 Sobic007G148200--Sobic001G293800 Sobic007G120401 Sobic007G120401 Sobic007G148200--Sobic007G120401 Sobic004G153400 Sobic004G153400 Sobic007G148200--Sobic004G153400 Sobic002G046800 Sobic002G046800 Sobic007G148200--Sobic002G046800 Sobic004G153501 Sobic004G153501 Sobic007G148200--Sobic004G153501 Sobic004G275200--Sobic006G152600 Sobic004G275200--Sobic007G148200 Sobic004G275200--Sobic001G293800 Sobic008G094700 Sobic008G094700 Sobic004G275200--Sobic008G094700 Sobic002G130700 Sobic002G130700 Sobic004G275200--Sobic002G130700 Sobic003G308700 Sobic003G308700 Sobic004G275200--Sobic003G308700 Sobic004G275200--Sobic001G377000 Sobic005G129400 Sobic005G129400 Sobic004G275200--Sobic005G129400 Sobic009G080200 Sobic009G080200 Sobic004G275200--Sobic009G080200 Sobic010G163150 Sobic010G163150 Sobic010G210600--Sobic010G163150 Sobic001G296300 Sobic001G296300 Sobic010G210600--Sobic001G296300 Sobic010G018300 Sobic010G018300 Sobic010G210600--Sobic010G018300 Sobic003G193800 Sobic003G193800 Sobic010G210600--Sobic003G193800 Sobic010G210600--Sobic006G167800 Sobic009G067400 Sobic009G067400 Sobic010G210600--Sobic009G067400 Sobic009G121600 Sobic009G121600 Sobic010G210600--Sobic009G121600 Sobic006G190000 Sobic006G190000 Sobic010G210600--Sobic006G190000 Sobic002G386200 Sobic002G386200 Sobic010G210600--Sobic002G386200 Sobic010G245100--Sobic009G213400 Sobic010G245100--Sobic006G273000 Sobic010G245100--Sobic003G222300 Sobic003G284300 Sobic003G284300 Sobic010G245100--Sobic003G284300 Sobic001G275200 Sobic001G275200 Sobic010G245100--Sobic001G275200 Sobic001G005500 Sobic001G005500 Sobic010G245100--Sobic001G005500 Sobic010G245100--Sobic010G052500 Sobic005G055900 Sobic005G055900 Sobic010G245100--Sobic005G055900 Sobic010G245100--Sobic001G093600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.