Gene annotation
Transcriptome id Sobic.001G110701.1
Synonym -
Functional annotation -
UniProt A0A1Z5S5Q6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G01480 : cyclophilin 38
RAP-DB (Rice) LOC_Os08g29370.1 : peptidyl-prolyl cis-trans isomerase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G528800 cell cycle control protein, putative, expressed -
2 Sobic.003G403300 Sucrose phosphate synthase genes(PubMedID : 24456189)@"sucrose-phosphate synthase, predicted target of miR6223 or sbi-miR6223-3p expressed in the stems of sweet sorghum"(PubMedID : 26117170)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase
3 Sobic.001G046200 - -
4 Sobic.004G069000 expressed protein -
5 Sobic.002G307800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K01931: protein neuralized
6 Sobic.003G220100 - -
7 Sobic.010G150100 expressed protein -
8 Sobic.006G222600 AT hook motif family protein, expressed -
9 Sobic.004G151300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF803 domain containing, putative, expressed -
10 Sobic.001G310100 WD domain, G-beta repeat domain containing protein, expressed K11804: DDB1- and CUL4-associated factor 8
11 Sobic.003G043200 EMB2410, putative, expressed -
12 Sobic.010G226000 expressed protein -
13 Sobic.004G240400 tRNA synthetase, putative, expressed -
14 Sobic.010G243900 OsFBO9 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL
15 Sobic.003G119600 zinc finger, C3HC4 type domain containing protein, expressed -
16 Sobic.002G376600 paramyosin, putative, expressed -
17 Sobic.002G186400 OsFBX323 - F-box domain containing protein, expressed -
18 Sobic.004G130932 - -
19 Sobic.001G345100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
20 Sobic.002G125600 - -


Gene co-expression network
sample Sobic001G110701 Sobic001G110701 Sobic001G528800 Sobic001G528800 Sobic001G110701--Sobic001G528800 Sobic003G403300 Sobic003G403300 Sobic001G110701--Sobic003G403300 Sobic001G046200 Sobic001G046200 Sobic001G110701--Sobic001G046200 Sobic004G069000 Sobic004G069000 Sobic001G110701--Sobic004G069000 Sobic002G307800 Sobic002G307800 Sobic001G110701--Sobic002G307800 Sobic003G220100 Sobic003G220100 Sobic001G110701--Sobic003G220100 Sobic010G150100 Sobic010G150100 Sobic001G110701--Sobic010G150100 Sobic006G222600 Sobic006G222600 Sobic001G110701--Sobic006G222600 Sobic004G151300 Sobic004G151300 Sobic001G110701--Sobic004G151300 Sobic001G528800--Sobic004G069000 Sobic001G198400 Sobic001G198400 Sobic001G528800--Sobic001G198400 Sobic001G378100 Sobic001G378100 Sobic001G528800--Sobic001G378100 Sobic001G530900 Sobic001G530900 Sobic001G528800--Sobic001G530900 Sobic010G002700 Sobic010G002700 Sobic001G528800--Sobic010G002700 Sobic001G345100 Sobic001G345100 Sobic001G528800--Sobic001G345100 Sobic004G143300 Sobic004G143300 Sobic001G528800--Sobic004G143300 Sobic008G033000 Sobic008G033000 Sobic001G528800--Sobic008G033000 Sobic004G042200 Sobic004G042200 Sobic001G528800--Sobic004G042200 Sobic002G310900 Sobic002G310900 Sobic003G403300--Sobic002G310900 Sobic003G010800 Sobic003G010800 Sobic003G403300--Sobic003G010800 Sobic003G403300--Sobic002G307800 Sobic002G098900 Sobic002G098900 Sobic003G403300--Sobic002G098900 Sobic002G407000 Sobic002G407000 Sobic003G403300--Sobic002G407000 Sobic010G134000 Sobic010G134000 Sobic003G403300--Sobic010G134000 Sobic001G067700 Sobic001G067700 Sobic003G403300--Sobic001G067700 Sobic002G069000 Sobic002G069000 Sobic003G403300--Sobic002G069000 Sobic003G198900 Sobic003G198900 Sobic003G403300--Sobic003G198900 Sobic010G243900 Sobic010G243900 Sobic001G046200--Sobic010G243900 Sobic003G148000 Sobic003G148000 Sobic001G046200--Sobic003G148000 Sobic002G408200 Sobic002G408200 Sobic001G046200--Sobic002G408200 Sobic006G098800 Sobic006G098800 Sobic001G046200--Sobic006G098800 Sobic001G161800 Sobic001G161800 Sobic001G046200--Sobic001G161800 Sobic002G042800 Sobic002G042800 Sobic001G046200--Sobic002G042800 Sobic003G429650 Sobic003G429650 Sobic001G046200--Sobic003G429650 Sobic004G034800 Sobic004G034800 Sobic001G046200--Sobic004G034800 Sobic006G219150 Sobic006G219150 Sobic001G046200--Sobic006G219150 Sobic003G271400 Sobic003G271400 Sobic004G069000--Sobic003G271400 Sobic004G069000--Sobic001G528800 Sobic004G069000--Sobic001G345100 Sobic004G069000--Sobic008G033000 Sobic005G206500 Sobic005G206500 Sobic004G069000--Sobic005G206500 Sobic010G085100 Sobic010G085100 Sobic004G069000--Sobic010G085100 Sobic007G136200 Sobic007G136200 Sobic004G069000--Sobic007G136200 Sobic001G536700 Sobic001G536700 Sobic004G069000--Sobic001G536700 Sobic004G069000--Sobic001G378100 Sobic009G217400 Sobic009G217400 Sobic002G307800--Sobic009G217400 Sobic006G250800 Sobic006G250800 Sobic002G307800--Sobic006G250800 Sobic002G307800--Sobic002G310900 Sobic002G307800--Sobic003G403300 Sobic002G307800--Sobic003G010800 Sobic002G307800--Sobic003G198900 Sobic004G302800 Sobic004G302800 Sobic002G307800--Sobic004G302800 Sobic010G007300 Sobic010G007300 Sobic002G307800--Sobic010G007300 Sobic003G433400 Sobic003G433400 Sobic002G307800--Sobic003G433400 Sobic005G106600 Sobic005G106600 Sobic003G220100--Sobic005G106600 Sobic001G333800 Sobic001G333800 Sobic003G220100--Sobic001G333800 Sobic004G312600 Sobic004G312600 Sobic003G220100--Sobic004G312600 Sobic007G058100 Sobic007G058100 Sobic003G220100--Sobic007G058100 Sobic009G038900 Sobic009G038900 Sobic003G220100--Sobic009G038900 Sobic003G220100--Sobic001G378100 Sobic001G169900 Sobic001G169900 Sobic003G220100--Sobic001G169900 Sobic003G073800 Sobic003G073800 Sobic003G220100--Sobic003G073800 Sobic003G220100--Sobic010G002700 Sobic010G150100--Sobic004G151300 Sobic010G150100--Sobic004G312600 Sobic001G331600 Sobic001G331600 Sobic010G150100--Sobic001G331600 Sobic010G150100--Sobic001G345100 Sobic010G150100--Sobic004G143300 Sobic004G127800 Sobic004G127800 Sobic010G150100--Sobic004G127800 Sobic002G043800 Sobic002G043800 Sobic010G150100--Sobic002G043800 Sobic007G227100 Sobic007G227100 Sobic010G150100--Sobic007G227100 Sobic003G003450 Sobic003G003450 Sobic010G150100--Sobic003G003450 Sobic007G201500 Sobic007G201500 Sobic006G222600--Sobic007G201500 Sobic002G376600 Sobic002G376600 Sobic006G222600--Sobic002G376600 Sobic004G169000 Sobic004G169000 Sobic006G222600--Sobic004G169000 Sobic003G191700 Sobic003G191700 Sobic006G222600--Sobic003G191700 Sobic005G149200 Sobic005G149200 Sobic006G222600--Sobic005G149200 Sobic010G218000 Sobic010G218000 Sobic006G222600--Sobic010G218000 Sobic010G210500 Sobic010G210500 Sobic006G222600--Sobic010G210500 Sobic002G341000 Sobic002G341000 Sobic006G222600--Sobic002G341000 Sobic006G222600--Sobic004G069000 Sobic004G151300--Sobic010G150100 Sobic008G167600 Sobic008G167600 Sobic004G151300--Sobic008G167600 Sobic004G151300--Sobic001G345100 Sobic006G090100 Sobic006G090100 Sobic004G151300--Sobic006G090100 Sobic004G151300--Sobic004G312600 Sobic001G207800 Sobic001G207800 Sobic004G151300--Sobic001G207800 Sobic004G151300--Sobic001G331600 Sobic002G382700 Sobic002G382700 Sobic004G151300--Sobic002G382700 Sobic004G151300--Sobic007G227100
Octagon: transcription factors


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