Gene annotation
Transcriptome id Sobic.002G186400.4
Synonym Sb02g023440
Functional annotation OsFBX323 - F-box domain containing protein, expressed
UniProt A0A1B6QC67
Pfam PF00646 PF08268
Panther DB PTHR31790 PTHR31790:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G52610 : F-box and associated interaction domains-containing protein
RAP-DB (Rice) LOC_Os09g20650.1 : OsFBX323 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a046750
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G186400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G244700 RIO1 family protein, expressed K08851: TP53RK, PRPK, TP53 regulating kinase and related kinases
2 Sobic.008G140200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.010G085100 geminivirus Rep-interacting motor protein, putative, expressed -
4 Sobic.006G089500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor 9, putative, expressed K14486: K14486, auxin response factor
5 Sobic.004G143300 high mobility group, putative, expressed -
6 Sobic.003G391600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AMP-binding domain containing protein, expressed -
7 Sobic.009G246300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CGMC_MAPKCMGC_2.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
8 Sobic.002G219300 ZOS9-13 - C2H2 zinc finger protein, expressed -
9 Sobic.003G372400 amidophosphoribosyltransferase, chloroplast precursor, putative, expressed K00764: purF, amidophosphoribosyltransferase
10 Sobic.004G147800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidyl-prolyl isomerase, putative, expressed -
11 Sobic.004G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
12 Sobic.004G082300 WD domain, G-beta repeat domain containing protein, expressed -
13 Sobic.007G058100 light-mediated development protein DET1, putative, expressed K10571: de-etiolated-1
14 Sobic.003G282000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@suppressor of phythchrome A, putative, expressed -
15 Sobic.007G058001 - K15429: TRM5, tRNA (guanine37-N1)-methyltransferase
16 Sobic.001G132600 histidine acid phosphatase, putative, expressed K13024: PPIP5K, inositol-hexakisphosphate/diphosphoinositol-pentakisphosphate 1-kinase
17 Sobic.003G355200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mannose-1-phosphate guanyltransferase, putative, expressed K00966: mannose-1-phosphate guanylyltransferase
18 Sobic.003G139500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CDPK - CBL-interacting protein kinase 1(PubMedID : 31721651)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
19 Sobic.003G220100 - -
20 Sobic.001G528800 cell cycle control protein, putative, expressed -


Gene co-expression network
sample Sobic002G186400 Sobic002G186400 Sobic001G244700 Sobic001G244700 Sobic002G186400--Sobic001G244700 Sobic008G140200 Sobic008G140200 Sobic002G186400--Sobic008G140200 Sobic010G085100 Sobic010G085100 Sobic002G186400--Sobic010G085100 Sobic006G089500 Sobic006G089500 Sobic002G186400--Sobic006G089500 Sobic004G143300 Sobic004G143300 Sobic002G186400--Sobic004G143300 Sobic003G391600 Sobic003G391600 Sobic002G186400--Sobic003G391600 Sobic009G246300 Sobic009G246300 Sobic002G186400--Sobic009G246300 Sobic002G219300 Sobic002G219300 Sobic002G186400--Sobic002G219300 Sobic003G372400 Sobic003G372400 Sobic002G186400--Sobic003G372400 Sobic002G404800 Sobic002G404800 Sobic001G244700--Sobic002G404800 Sobic002G196600 Sobic002G196600 Sobic001G244700--Sobic002G196600 Sobic009G038900 Sobic009G038900 Sobic001G244700--Sobic009G038900 Sobic001G244600 Sobic001G244600 Sobic001G244700--Sobic001G244600 Sobic001G217900 Sobic001G217900 Sobic001G244700--Sobic001G217900 Sobic001G244700--Sobic010G085100 Sobic006G259800 Sobic006G259800 Sobic001G244700--Sobic006G259800 Sobic003G260100 Sobic003G260100 Sobic001G244700--Sobic003G260100 Sobic008G033000 Sobic008G033000 Sobic001G244700--Sobic008G033000 Sobic008G140200--Sobic010G085100 Sobic004G112100 Sobic004G112100 Sobic008G140200--Sobic004G112100 Sobic008G140200--Sobic002G404800 Sobic004G215800 Sobic004G215800 Sobic008G140200--Sobic004G215800 Sobic006G153400 Sobic006G153400 Sobic008G140200--Sobic006G153400 Sobic009G048900 Sobic009G048900 Sobic008G140200--Sobic009G048900 Sobic001G134100 Sobic001G134100 Sobic008G140200--Sobic001G134100 Sobic009G256100 Sobic009G256100 Sobic008G140200--Sobic009G256100 Sobic010G104800 Sobic010G104800 Sobic008G140200--Sobic010G104800 Sobic005G101200 Sobic005G101200 Sobic010G085100--Sobic005G101200 Sobic003G185900 Sobic003G185900 Sobic010G085100--Sobic003G185900 Sobic007G105500 Sobic007G105500 Sobic010G085100--Sobic007G105500 Sobic010G085100--Sobic002G404800 Sobic010G085100--Sobic004G215800 Sobic010G085100--Sobic008G140200 Sobic003G036200 Sobic003G036200 Sobic010G085100--Sobic003G036200 Sobic010G085100--Sobic008G033000 Sobic004G154200 Sobic004G154200 Sobic010G085100--Sobic004G154200 Sobic001G420400 Sobic001G420400 Sobic006G089500--Sobic001G420400 Sobic009G215500 Sobic009G215500 Sobic006G089500--Sobic009G215500 Sobic004G042200 Sobic004G042200 Sobic006G089500--Sobic004G042200 Sobic006G031800 Sobic006G031800 Sobic006G089500--Sobic006G031800 Sobic004G147800 Sobic004G147800 Sobic006G089500--Sobic004G147800 Sobic006G089500--Sobic001G217900 Sobic001G062900 Sobic001G062900 Sobic006G089500--Sobic001G062900 Sobic001G540600 Sobic001G540600 Sobic006G089500--Sobic001G540600 Sobic001G097100 Sobic001G097100 Sobic006G089500--Sobic001G097100 Sobic001G345100 Sobic001G345100 Sobic004G143300--Sobic001G345100 Sobic007G058100 Sobic007G058100 Sobic004G143300--Sobic007G058100 Sobic010G231300 Sobic010G231300 Sobic004G143300--Sobic010G231300 Sobic008G129900 Sobic008G129900 Sobic004G143300--Sobic008G129900 Sobic006G235400 Sobic006G235400 Sobic004G143300--Sobic006G235400 Sobic004G143300--Sobic001G217900 Sobic006G161500 Sobic006G161500 Sobic004G143300--Sobic006G161500 Sobic001G263100 Sobic001G263100 Sobic004G143300--Sobic001G263100 Sobic004G128900 Sobic004G128900 Sobic004G143300--Sobic004G128900 Sobic002G324500 Sobic002G324500 Sobic003G391600--Sobic002G324500 Sobic003G318300 Sobic003G318300 Sobic003G391600--Sobic003G318300 Sobic005G039700 Sobic005G039700 Sobic003G391600--Sobic005G039700 Sobic002G220900 Sobic002G220900 Sobic003G391600--Sobic002G220900 Sobic006G120500 Sobic006G120500 Sobic003G391600--Sobic006G120500 Sobic004G151800 Sobic004G151800 Sobic003G391600--Sobic004G151800 Sobic003G042900 Sobic003G042900 Sobic003G391600--Sobic003G042900 Sobic003G391600--Sobic004G154200 Sobic003G391600--Sobic002G186400 Sobic004G322700 Sobic004G322700 Sobic009G246300--Sobic004G322700 Sobic001G221800 Sobic001G221800 Sobic009G246300--Sobic001G221800 Sobic003G139500 Sobic003G139500 Sobic009G246300--Sobic003G139500 Sobic003G277600 Sobic003G277600 Sobic009G246300--Sobic003G277600 Sobic004G322600 Sobic004G322600 Sobic009G246300--Sobic004G322600 Sobic009G016000 Sobic009G016000 Sobic009G246300--Sobic009G016000 Sobic001G073300 Sobic001G073300 Sobic009G246300--Sobic001G073300 Sobic009G246300--Sobic001G244600 Sobic009G246300--Sobic001G244700 Sobic002G219300--Sobic003G042900 Sobic006G093100 Sobic006G093100 Sobic002G219300--Sobic006G093100 Sobic002G219300--Sobic002G196600 Sobic002G219300--Sobic004G215800 Sobic010G173400 Sobic010G173400 Sobic002G219300--Sobic010G173400 Sobic002G219300--Sobic002G404800 Sobic002G390100 Sobic002G390100 Sobic002G219300--Sobic002G390100 Sobic004G165500 Sobic004G165500 Sobic002G219300--Sobic004G165500 Sobic002G219300--Sobic005G039700 Sobic003G372400--Sobic004G215800 Sobic002G056500 Sobic002G056500 Sobic003G372400--Sobic002G056500 Sobic005G231500 Sobic005G231500 Sobic003G372400--Sobic005G231500 Sobic003G097600 Sobic003G097600 Sobic003G372400--Sobic003G097600 Sobic003G372400--Sobic007G105500 Sobic003G314000 Sobic003G314000 Sobic003G372400--Sobic003G314000 Sobic003G372400--Sobic006G093100 Sobic003G372400--Sobic008G129900 Sobic003G371250 Sobic003G371250 Sobic003G372400--Sobic003G371250
Octagon: transcription factors


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