Gene annotation
Transcriptome id Sobic.001G114650.1
Synonym -
Functional annotation -
UniProt A0A1Z5S599
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g14080.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G057233 - -
2 Sobic.001G394800 tetratricopeptide repeat domain containing protein, expressed -
3 Sobic.001G169900 seed maturation protein PM23, putative, expressed -
4 Sobic.002G138100 ACT domain containing protein, expressed -
5 Sobic.001G198100 PAP fibrillin family domain containing protein, expressed -
6 Sobic.009G228100 -(PubMedID : 23915383)@ubiquitin conjugating enzyme protein, putative, expressed K10581: ubiquitin-conjugating enzyme E2 O
7 Sobic.003G011900 expressed protein -
8 Sobic.006G105400 expressed protein -
9 Sobic.007G010800 similar to Os01g0104100 protein(PubMedID : 29862293)@expressed protein -
10 Sobic.003G017100 ABC transporter, ATP-binding protein, putative, expressed -
11 Sobic.006G232600 amine oxidase, flavin-containing, domain containing protein, expressed K02293: PDS, 15-cis-phytoene desaturase
12 Sobic.002G006600 -(PubMedID : 26976818)@aminotransferase, classes I and II, domain containing protein, expressed K14272: glutamate--glyoxylate aminotransferase
13 Sobic.008G167700 expressed protein -
14 Sobic.001G016100 pentatricopeptide, putative, expressed -
15 Sobic.010G255700 plant-specific domain TIGR01589 family protein, putative, expressed -
16 Sobic.003G276300 zinc knuckle domain containing protein, expressed -
17 Sobic.006G142600 lipase class 3 family protein, putative, expressed -
18 Sobic.001G054000 WD domain, G-beta repeat domain containing protein, expressed K14003: PREB, prolactin regulatory element-binding protein
19 Sobic.003G029500 zinc finger, C3HC4 type family protein, expressed -
20 Sobic.010G248700 disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1


Gene co-expression network
sample Sobic001G114650 Sobic001G114650 Sobic003G057233 Sobic003G057233 Sobic001G114650--Sobic003G057233 Sobic001G394800 Sobic001G394800 Sobic001G114650--Sobic001G394800 Sobic001G169900 Sobic001G169900 Sobic001G114650--Sobic001G169900 Sobic002G138100 Sobic002G138100 Sobic001G114650--Sobic002G138100 Sobic001G198100 Sobic001G198100 Sobic001G114650--Sobic001G198100 Sobic009G228100 Sobic009G228100 Sobic001G114650--Sobic009G228100 Sobic003G011900 Sobic003G011900 Sobic001G114650--Sobic003G011900 Sobic006G105400 Sobic006G105400 Sobic001G114650--Sobic006G105400 Sobic007G010800 Sobic007G010800 Sobic001G114650--Sobic007G010800 Sobic003G057233--Sobic001G394800 Sobic003G057233--Sobic001G169900 Sobic003G057233--Sobic001G198100 Sobic003G017100 Sobic003G017100 Sobic003G057233--Sobic003G017100 Sobic004G258700 Sobic004G258700 Sobic003G057233--Sobic004G258700 Sobic010G248700 Sobic010G248700 Sobic003G057233--Sobic010G248700 Sobic010G132600 Sobic010G132600 Sobic003G057233--Sobic010G132600 Sobic010G002700 Sobic010G002700 Sobic003G057233--Sobic010G002700 Sobic006G219150 Sobic006G219150 Sobic003G057233--Sobic006G219150 Sobic001G394800--Sobic002G138100 Sobic001G394800--Sobic001G169900 Sobic003G003450 Sobic003G003450 Sobic001G394800--Sobic003G003450 Sobic001G394800--Sobic003G057233 Sobic001G394800--Sobic007G010800 Sobic001G283100 Sobic001G283100 Sobic001G394800--Sobic001G283100 Sobic004G035900 Sobic004G035900 Sobic001G394800--Sobic004G035900 Sobic001G054000 Sobic001G054000 Sobic001G394800--Sobic001G054000 Sobic007G227100 Sobic007G227100 Sobic001G394800--Sobic007G227100 Sobic001G169900--Sobic010G002700 Sobic006G158100 Sobic006G158100 Sobic001G169900--Sobic006G158100 Sobic010G043800 Sobic010G043800 Sobic001G169900--Sobic010G043800 Sobic007G136200 Sobic007G136200 Sobic001G169900--Sobic007G136200 Sobic001G169900--Sobic001G198100 Sobic006G142600 Sobic006G142600 Sobic001G169900--Sobic006G142600 Sobic001G169900--Sobic001G394800 Sobic001G017300 Sobic001G017300 Sobic001G169900--Sobic001G017300 Sobic001G169900--Sobic003G017100 Sobic002G138100--Sobic001G394800 Sobic002G138100--Sobic007G010800 Sobic009G040400 Sobic009G040400 Sobic002G138100--Sobic009G040400 Sobic002G138100--Sobic009G228100 Sobic002G138100--Sobic001G169900 Sobic003G103300 Sobic003G103300 Sobic002G138100--Sobic003G103300 Sobic002G138100--Sobic003G003450 Sobic002G138100--Sobic003G057233 Sobic002G356900 Sobic002G356900 Sobic002G138100--Sobic002G356900 Sobic001G198100--Sobic003G017100 Sobic003G247400 Sobic003G247400 Sobic001G198100--Sobic003G247400 Sobic001G198100--Sobic001G169900 Sobic001G198100--Sobic010G002700 Sobic002G006600 Sobic002G006600 Sobic001G198100--Sobic002G006600 Sobic001G198100--Sobic010G043800 Sobic009G121000 Sobic009G121000 Sobic001G198100--Sobic009G121000 Sobic003G276300 Sobic003G276300 Sobic001G198100--Sobic003G276300 Sobic001G198100--Sobic006G142600 Sobic010G255700 Sobic010G255700 Sobic009G228100--Sobic010G255700 Sobic009G228100--Sobic002G138100 Sobic009G228100--Sobic001G169900 Sobic009G228100--Sobic003G057233 Sobic003G029500 Sobic003G029500 Sobic009G228100--Sobic003G029500 Sobic009G228100--Sobic001G394800 Sobic009G228100--Sobic010G248700 Sobic001G318432 Sobic001G318432 Sobic009G228100--Sobic001G318432 Sobic009G228100--Sobic002G006600 Sobic001G060100 Sobic001G060100 Sobic003G011900--Sobic001G060100 Sobic003G011900--Sobic001G198100 Sobic003G011900--Sobic010G255700 Sobic003G011900--Sobic003G057233 Sobic010G243900 Sobic010G243900 Sobic003G011900--Sobic010G243900 Sobic003G011900--Sobic001G169900 Sobic003G011900--Sobic004G258700 Sobic006G079400 Sobic006G079400 Sobic003G011900--Sobic006G079400 Sobic003G011900--Sobic002G006600 Sobic001G214300 Sobic001G214300 Sobic006G105400--Sobic001G214300 Sobic006G048600 Sobic006G048600 Sobic006G105400--Sobic006G048600 Sobic006G048500 Sobic006G048500 Sobic006G105400--Sobic006G048500 Sobic006G182900 Sobic006G182900 Sobic006G105400--Sobic006G182900 Sobic004G007100 Sobic004G007100 Sobic006G105400--Sobic004G007100 Sobic007G161000 Sobic007G161000 Sobic006G105400--Sobic007G161000 Sobic001G365900 Sobic001G365900 Sobic006G105400--Sobic001G365900 Sobic006G105400--Sobic010G255700 Sobic004G341900 Sobic004G341900 Sobic006G105400--Sobic004G341900 Sobic007G010800--Sobic002G356900 Sobic001G018000 Sobic001G018000 Sobic007G010800--Sobic001G018000 Sobic010G100900 Sobic010G100900 Sobic007G010800--Sobic010G100900 Sobic007G010800--Sobic009G040400 Sobic002G351200 Sobic002G351200 Sobic007G010800--Sobic002G351200 Sobic007G010800--Sobic003G003450 Sobic004G268400 Sobic004G268400 Sobic007G010800--Sobic004G268400 Sobic004G317700 Sobic004G317700 Sobic007G010800--Sobic004G317700 Sobic003G186800 Sobic003G186800 Sobic007G010800--Sobic003G186800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.