Gene annotation
Transcriptome id Sobic.001G118500.1
Synonym
Functional annotation -
UniProt A0A1B6QIK1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G020700 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
2 Sobic.004G246800 pentatricopeptide, putative, expressed -
3 Sobic.001G076200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein ycf44, putative, expressed K07399: resB, cytochrome c biogenesis protein
4 Sobic.004G255500 SET domain-containing protein, putative, expressed -
5 Sobic.001G337600 expressed protein -
6 Sobic.009G212000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@S1 RNA binding domain containing protein, expressed K02945: RP-S1, small subunit ribosomal protein S1
7 Sobic.002G305700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
8 Sobic.002G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.009G004800 - -
10 Sobic.006G204100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DAG protein, chloroplast precursor, putative, expressed -
11 Sobic.001G384800 expressed protein -
12 Sobic.003G114100 expressed protein -
13 Sobic.001G281500 OsClp11 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
14 Sobic.002G345200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.002G370000 gibberellin receptor GID1L2, putative, expressed -
16 Sobic.001G058400 pentatricopeptide, putative, expressed -
17 Sobic.004G250200 ORMM1(PubMedID : 24676859)@RNA recognition motif family protein, expressed -
18 Sobic.003G330100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloroplast ribonuclease III domain protein, putative, expressed -
19 Sobic.001G460200 PPR repeat domain containing protein, putative, expressed -
20 Sobic.004G249500 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -


Gene co-expression network
sample Sobic001G118500 Sobic001G118500 Sobic005G020700 Sobic005G020700 Sobic001G118500--Sobic005G020700 Sobic004G246800 Sobic004G246800 Sobic001G118500--Sobic004G246800 Sobic001G076200 Sobic001G076200 Sobic001G118500--Sobic001G076200 Sobic004G255500 Sobic004G255500 Sobic001G118500--Sobic004G255500 Sobic001G337600 Sobic001G337600 Sobic001G118500--Sobic001G337600 Sobic009G212000 Sobic009G212000 Sobic001G118500--Sobic009G212000 Sobic002G305700 Sobic002G305700 Sobic001G118500--Sobic002G305700 Sobic002G190100 Sobic002G190100 Sobic001G118500--Sobic002G190100 Sobic009G004800 Sobic009G004800 Sobic001G118500--Sobic009G004800 Sobic001G448600 Sobic001G448600 Sobic005G020700--Sobic001G448600 Sobic005G020700--Sobic004G255500 Sobic009G131800 Sobic009G131800 Sobic005G020700--Sobic009G131800 Sobic009G238300 Sobic009G238300 Sobic005G020700--Sobic009G238300 Sobic001G281500 Sobic001G281500 Sobic005G020700--Sobic001G281500 Sobic002G181132 Sobic002G181132 Sobic005G020700--Sobic002G181132 Sobic005G020700--Sobic001G337600 Sobic004G309400 Sobic004G309400 Sobic005G020700--Sobic004G309400 Sobic004G301200 Sobic004G301200 Sobic005G020700--Sobic004G301200 Sobic004G246800--Sobic001G076200 Sobic002G209600 Sobic002G209600 Sobic004G246800--Sobic002G209600 Sobic008G131700 Sobic008G131700 Sobic004G246800--Sobic008G131700 Sobic008G021700 Sobic008G021700 Sobic004G246800--Sobic008G021700 Sobic005G022800 Sobic005G022800 Sobic004G246800--Sobic005G022800 Sobic004G151900 Sobic004G151900 Sobic004G246800--Sobic004G151900 Sobic001G514100 Sobic001G514100 Sobic004G246800--Sobic001G514100 Sobic005G197300 Sobic005G197300 Sobic004G246800--Sobic005G197300 Sobic004G246800--Sobic004G255500 Sobic001G076200--Sobic004G246800 Sobic003G030400 Sobic003G030400 Sobic001G076200--Sobic003G030400 Sobic001G537700 Sobic001G537700 Sobic001G076200--Sobic001G537700 Sobic003G114100 Sobic003G114100 Sobic001G076200--Sobic003G114100 Sobic009G233800 Sobic009G233800 Sobic001G076200--Sobic009G233800 Sobic004G249500 Sobic004G249500 Sobic001G076200--Sobic004G249500 Sobic001G076200--Sobic008G021700 Sobic002G114700 Sobic002G114700 Sobic001G076200--Sobic002G114700 Sobic004G055600 Sobic004G055600 Sobic001G076200--Sobic004G055600 Sobic001G099000 Sobic001G099000 Sobic004G255500--Sobic001G099000 Sobic004G255500--Sobic001G448600 Sobic004G255500--Sobic005G022800 Sobic004G255500--Sobic001G281500 Sobic002G013700 Sobic002G013700 Sobic004G255500--Sobic002G013700 Sobic010G027200 Sobic010G027200 Sobic004G255500--Sobic010G027200 Sobic005G184300 Sobic005G184300 Sobic004G255500--Sobic005G184300 Sobic002G140000 Sobic002G140000 Sobic004G255500--Sobic002G140000 Sobic007G015300 Sobic007G015300 Sobic004G255500--Sobic007G015300 Sobic001G337600--Sobic001G099000 Sobic001G337600--Sobic004G255500 Sobic009G055800 Sobic009G055800 Sobic001G337600--Sobic009G055800 Sobic005G036100 Sobic005G036100 Sobic001G337600--Sobic005G036100 Sobic001G122400 Sobic001G122400 Sobic001G337600--Sobic001G122400 Sobic006G107600 Sobic006G107600 Sobic001G337600--Sobic006G107600 Sobic003G386300 Sobic003G386300 Sobic001G337600--Sobic003G386300 Sobic003G162900 Sobic003G162900 Sobic001G337600--Sobic003G162900 Sobic003G077400 Sobic003G077400 Sobic001G337600--Sobic003G077400 Sobic009G212000--Sobic002G305700 Sobic003G202300 Sobic003G202300 Sobic009G212000--Sobic003G202300 Sobic004G191200 Sobic004G191200 Sobic009G212000--Sobic004G191200 Sobic009G212000--Sobic002G190100 Sobic003G256200 Sobic003G256200 Sobic009G212000--Sobic003G256200 Sobic010G095200 Sobic010G095200 Sobic009G212000--Sobic010G095200 Sobic001G453300 Sobic001G453300 Sobic009G212000--Sobic001G453300 Sobic004G298100 Sobic004G298100 Sobic009G212000--Sobic004G298100 Sobic002G200200 Sobic002G200200 Sobic009G212000--Sobic002G200200 Sobic001G191000 Sobic001G191000 Sobic002G305700--Sobic001G191000 Sobic001G333000 Sobic001G333000 Sobic002G305700--Sobic001G333000 Sobic002G305700--Sobic003G256200 Sobic002G305700--Sobic006G107600 Sobic002G305700--Sobic004G191200 Sobic006G280050 Sobic006G280050 Sobic002G305700--Sobic006G280050 Sobic006G248200 Sobic006G248200 Sobic002G305700--Sobic006G248200 Sobic002G305700--Sobic009G212000 Sobic001G240000 Sobic001G240000 Sobic002G305700--Sobic001G240000 Sobic006G025700 Sobic006G025700 Sobic002G190100--Sobic006G025700 Sobic006G263800 Sobic006G263800 Sobic002G190100--Sobic006G263800 Sobic008G130700 Sobic008G130700 Sobic002G190100--Sobic008G130700 Sobic002G242600 Sobic002G242600 Sobic002G190100--Sobic002G242600 Sobic001G027600 Sobic001G027600 Sobic002G190100--Sobic001G027600 Sobic004G044000 Sobic004G044000 Sobic002G190100--Sobic004G044000 Sobic004G253800 Sobic004G253800 Sobic002G190100--Sobic004G253800 Sobic009G059100 Sobic009G059100 Sobic002G190100--Sobic009G059100 Sobic001G120000 Sobic001G120000 Sobic002G190100--Sobic001G120000 Sobic002G163700 Sobic002G163700 Sobic009G004800--Sobic002G163700 Sobic009G036300 Sobic009G036300 Sobic009G004800--Sobic009G036300 Sobic003G330100 Sobic003G330100 Sobic009G004800--Sobic003G330100 Sobic001G388400 Sobic001G388400 Sobic009G004800--Sobic001G388400 Sobic003G310100 Sobic003G310100 Sobic009G004800--Sobic003G310100 Sobic010G028000 Sobic010G028000 Sobic009G004800--Sobic010G028000 Sobic009G046800 Sobic009G046800 Sobic009G004800--Sobic009G046800 Sobic009G234200 Sobic009G234200 Sobic009G004800--Sobic009G234200 Sobic001G450600 Sobic001G450600 Sobic009G004800--Sobic001G450600
Octagon: transcription factors


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