Gene annotation
Transcriptome id Sobic.001G187700.1
Synonym Sb01g016490
Functional annotation expressed protein
UniProt C5WV74
Pfam -
Panther DB PTHR35131 PTHR35131:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G21780 : -
RAP-DB (Rice) LOC_Os03g36960.1 : expressed protein
MaizeGDB (Corn) Zm00025a017387
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G359500 cytochrome P450, putative, expressed -
2 Sobic.005G043600 coatomer subunit beta, putative, expressed K17302: COPB2, coatomer subunit beta'
3 Sobic.001G260500 expressed protein -
4 Sobic.007G198500 BTB/POZ domain containing protein, expressed K10523: speckle-type POZ protein
5 Sobic.007G034000 expressed protein -
6 Sobic.004G226100 RIPER1 - Ripening-related family protein precursor, expressed -
7 Sobic.008G048800 citrate-binding protein precursor, putative, expressed -
8 Sobic.005G221000 hypothetical protein -
9 Sobic.003G203200 hypothetical protein -
10 Sobic.005G024700 major facilitator superfamily antiporter, putative, expressed -
11 Sobic.001G316400 heavy metal-associated domain containing protein, expressed -
12 Sobic.001G354400 O-methyltransferase, putative, expressed -
13 Sobic.008G074400 glutathione S-transferase, putative, expressed K01800: maiA, maleylacetoacetate isomerase
14 Sobic.009G229800 Uncharacterized gene family(PubMedID : 29126242)@"Causal gene for dw1, a putative membrane protein of unknown function"(PubMedID : 26963094)@expressed protein -
15 Sobic.006G181300 Polyphenol oxidas(PubMedID : 28818380)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
16 Sobic.002G338100 THYLAKOID FORMATION1, chloroplast precursor, putative, expressed -
17 Sobic.007G092700 - -
18 Sobic.002G085300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
19 Sobic.001G474700 expressed protein -
20 Sobic.001G150650 - -


Gene co-expression network
sample Sobic001G187700 Sobic001G187700 Sobic001G359500 Sobic001G359500 Sobic001G187700--Sobic001G359500 Sobic005G043600 Sobic005G043600 Sobic001G187700--Sobic005G043600 Sobic001G260500 Sobic001G260500 Sobic001G187700--Sobic001G260500 Sobic007G198500 Sobic007G198500 Sobic001G187700--Sobic007G198500 Sobic007G034000 Sobic007G034000 Sobic001G187700--Sobic007G034000 Sobic004G226100 Sobic004G226100 Sobic001G187700--Sobic004G226100 Sobic008G048800 Sobic008G048800 Sobic001G187700--Sobic008G048800 Sobic005G221000 Sobic005G221000 Sobic001G187700--Sobic005G221000 Sobic003G203200 Sobic003G203200 Sobic001G187700--Sobic003G203200 Sobic006G181300 Sobic006G181300 Sobic001G359500--Sobic006G181300 Sobic002G338100 Sobic002G338100 Sobic001G359500--Sobic002G338100 Sobic001G504900 Sobic001G504900 Sobic001G359500--Sobic001G504900 Sobic009G207600 Sobic009G207600 Sobic001G359500--Sobic009G207600 Sobic001G176600 Sobic001G176600 Sobic001G359500--Sobic001G176600 Sobic009G226600 Sobic009G226600 Sobic001G359500--Sobic009G226600 Sobic001G359500--Sobic007G034000 Sobic008G074400 Sobic008G074400 Sobic001G359500--Sobic008G074400 Sobic010G205200 Sobic010G205200 Sobic001G359500--Sobic010G205200 Sobic005G043600--Sobic007G198500 Sobic002G058200 Sobic002G058200 Sobic005G043600--Sobic002G058200 Sobic005G043900 Sobic005G043900 Sobic005G043600--Sobic005G043900 Sobic008G175032 Sobic008G175032 Sobic005G043600--Sobic008G175032 Sobic002G098200 Sobic002G098200 Sobic005G043600--Sobic002G098200 Sobic008G048900 Sobic008G048900 Sobic005G043600--Sobic008G048900 Sobic005G043600--Sobic003G203200 Sobic005G043600--Sobic001G359500 Sobic001G247550 Sobic001G247550 Sobic005G043600--Sobic001G247550 Sobic001G058700 Sobic001G058700 Sobic001G260500--Sobic001G058700 Sobic006G115600 Sobic006G115600 Sobic001G260500--Sobic006G115600 Sobic003G408600 Sobic003G408600 Sobic001G260500--Sobic003G408600 Sobic004G127400 Sobic004G127400 Sobic001G260500--Sobic004G127400 Sobic004G113400 Sobic004G113400 Sobic001G260500--Sobic004G113400 Sobic006G040500 Sobic006G040500 Sobic001G260500--Sobic006G040500 Sobic003G225700 Sobic003G225700 Sobic001G260500--Sobic003G225700 Sobic001G196500 Sobic001G196500 Sobic001G260500--Sobic001G196500 Sobic005G026200 Sobic005G026200 Sobic001G260500--Sobic005G026200 Sobic007G198500--Sobic005G043600 Sobic007G198500--Sobic008G048900 Sobic007G198500--Sobic008G175032 Sobic007G198500--Sobic001G359500 Sobic007G198500--Sobic001G247550 Sobic007G198500--Sobic003G203200 Sobic007G198500--Sobic005G043900 Sobic007G092700 Sobic007G092700 Sobic007G034000--Sobic007G092700 Sobic007G034000--Sobic006G181300 Sobic002G210800 Sobic002G210800 Sobic007G034000--Sobic002G210800 Sobic007G034000--Sobic001G359500 Sobic001G069900 Sobic001G069900 Sobic007G034000--Sobic001G069900 Sobic006G082000 Sobic006G082000 Sobic007G034000--Sobic006G082000 Sobic007G034000--Sobic005G221000 Sobic001G015500 Sobic001G015500 Sobic007G034000--Sobic001G015500 Sobic007G034000--Sobic001G504900 Sobic004G226100--Sobic007G034000 Sobic001G354400 Sobic001G354400 Sobic004G226100--Sobic001G354400 Sobic001G316400 Sobic001G316400 Sobic004G226100--Sobic001G316400 Sobic004G226100--Sobic007G092700 Sobic002G122800 Sobic002G122800 Sobic004G226100--Sobic002G122800 Sobic004G226100--Sobic003G203200 Sobic004G226100--Sobic001G069900 Sobic004G226100--Sobic006G181300 Sobic002G085300 Sobic002G085300 Sobic004G226100--Sobic002G085300 Sobic008G048800--Sobic001G316400 Sobic008G048800--Sobic003G203200 Sobic008G048800--Sobic001G354400 Sobic002G130000 Sobic002G130000 Sobic008G048800--Sobic002G130000 Sobic008G048800--Sobic005G221000 Sobic008G048800--Sobic008G048900 Sobic008G048800--Sobic006G181300 Sobic008G048800--Sobic007G034000 Sobic008G048800--Sobic008G074400 Sobic005G221000--Sobic002G210800 Sobic010G212350 Sobic010G212350 Sobic005G221000--Sobic010G212350 Sobic005G221000--Sobic007G034000 Sobic005G221000--Sobic001G069900 Sobic005G221000--Sobic006G181300 Sobic003G315500 Sobic003G315500 Sobic005G221000--Sobic003G315500 Sobic009G120200 Sobic009G120200 Sobic005G221000--Sobic009G120200 Sobic005G221000--Sobic001G316400 Sobic001G150650 Sobic001G150650 Sobic005G221000--Sobic001G150650 Sobic003G203200--Sobic002G122800 Sobic003G203200--Sobic001G354400 Sobic003G203200--Sobic001G316400 Sobic003G203200--Sobic005G043900 Sobic009G114000 Sobic009G114000 Sobic003G203200--Sobic009G114000 Sobic006G091700 Sobic006G091700 Sobic003G203200--Sobic006G091700 Sobic003G203200--Sobic002G085300 Sobic003G203200--Sobic006G181300 Sobic006G246600 Sobic006G246600 Sobic003G203200--Sobic006G246600
Octagon: transcription factors


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