Gene annotation
Transcriptome id Sobic.001G194700.1
Synonym
Functional annotation -
UniProt A0A1B6QJU6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a010177
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G038700 zinc finger, C3HC4 type domain containing protein, expressed K11985: TRAIP, TRAF-interacting protein
2 Sobic.008G123200 AAA-type ATPase family protein, putative, expressed -
3 Sobic.002G251800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
4 Sobic.001G448000 AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
5 Sobic.003G325900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide repeat, putative, expressed -
6 Sobic.003G336500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KH domain containing protein, putative, expressed K14945: protein quaking
7 Sobic.010G106100 endoglucanase, putative, expressed -
8 Sobic.009G200000 expressed protein -
9 Sobic.010G175000 expressed protein -
10 Sobic.006G281900 down-regulated TF in developmental senescence(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
11 Sobic.004G139900 ATP binding, related, putative, expressed -
12 Sobic.005G138000 zinc knuckle domain containing protein, expressed -
13 Sobic.004G192500 protein kinase PKN/PRK1, effector, putative, expressed -
14 Sobic.009G105400 OsFBX135 - F-box domain containing protein, expressed -
15 Sobic.006G201600 transcription factor FL, putative, expressed -
16 Sobic.009G053300 - -
17 Sobic.007G199800 BTB/POZ domain containing protein, expressed K10523: speckle-type POZ protein
18 Sobic.001G483800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tubulin--tyrosine ligase-like protein 12, putative, expressed K16609: tubulin--tyrosine ligase-like protein 12
19 Sobic.009G253200 RNA polymerase sigma factor, putative, expressed -
20 Sobic.009G191500 pseudouridylate synthase, putative, expressed K06176: truD, tRNA pseudouridine13 synthase


Gene co-expression network
sample Sobic001G194700 Sobic001G194700 Sobic007G038700 Sobic007G038700 Sobic001G194700--Sobic007G038700 Sobic008G123200 Sobic008G123200 Sobic001G194700--Sobic008G123200 Sobic002G251800 Sobic002G251800 Sobic001G194700--Sobic002G251800 Sobic001G448000 Sobic001G448000 Sobic001G194700--Sobic001G448000 Sobic003G325900 Sobic003G325900 Sobic001G194700--Sobic003G325900 Sobic003G336500 Sobic003G336500 Sobic001G194700--Sobic003G336500 Sobic010G106100 Sobic010G106100 Sobic001G194700--Sobic010G106100 Sobic009G200000 Sobic009G200000 Sobic001G194700--Sobic009G200000 Sobic010G175000 Sobic010G175000 Sobic001G194700--Sobic010G175000 Sobic007G038700--Sobic002G251800 Sobic010G277200 Sobic010G277200 Sobic007G038700--Sobic010G277200 Sobic007G038700--Sobic008G123200 Sobic007G038700--Sobic003G336500 Sobic009G105400 Sobic009G105400 Sobic007G038700--Sobic009G105400 Sobic005G078700 Sobic005G078700 Sobic007G038700--Sobic005G078700 Sobic007G038700--Sobic001G194700 Sobic003G153900 Sobic003G153900 Sobic007G038700--Sobic003G153900 Sobic008G031200 Sobic008G031200 Sobic007G038700--Sobic008G031200 Sobic005G138000 Sobic005G138000 Sobic008G123200--Sobic005G138000 Sobic009G224300 Sobic009G224300 Sobic008G123200--Sobic009G224300 Sobic008G123200--Sobic003G336500 Sobic008G123200--Sobic001G448000 Sobic008G123200--Sobic010G175000 Sobic008G123200--Sobic007G038700 Sobic004G123200 Sobic004G123200 Sobic008G123200--Sobic004G123200 Sobic008G123200--Sobic009G105400 Sobic008G165266 Sobic008G165266 Sobic008G123200--Sobic008G165266 Sobic005G028300 Sobic005G028300 Sobic002G251800--Sobic005G028300 Sobic002G251800--Sobic007G038700 Sobic002G084400 Sobic002G084400 Sobic002G251800--Sobic002G084400 Sobic006G271900 Sobic006G271900 Sobic002G251800--Sobic006G271900 Sobic001G040600 Sobic001G040600 Sobic002G251800--Sobic001G040600 Sobic008G099900 Sobic008G099900 Sobic002G251800--Sobic008G099900 Sobic006G085900 Sobic006G085900 Sobic002G251800--Sobic006G085900 Sobic007G060600 Sobic007G060600 Sobic002G251800--Sobic007G060600 Sobic001G049800 Sobic001G049800 Sobic002G251800--Sobic001G049800 Sobic004G139900 Sobic004G139900 Sobic001G448000--Sobic004G139900 Sobic001G448000--Sobic009G200000 Sobic007G097100 Sobic007G097100 Sobic001G448000--Sobic007G097100 Sobic008G042200 Sobic008G042200 Sobic001G448000--Sobic008G042200 Sobic004G115700 Sobic004G115700 Sobic001G448000--Sobic004G115700 Sobic004G269100 Sobic004G269100 Sobic001G448000--Sobic004G269100 Sobic004G215100 Sobic004G215100 Sobic001G448000--Sobic004G215100 Sobic001G448000--Sobic008G123200 Sobic005G092700 Sobic005G092700 Sobic001G448000--Sobic005G092700 Sobic003G325900--Sobic005G078700 Sobic004G282500 Sobic004G282500 Sobic003G325900--Sobic004G282500 Sobic003G184666 Sobic003G184666 Sobic003G325900--Sobic003G184666 Sobic001G268300 Sobic001G268300 Sobic003G325900--Sobic001G268300 Sobic002G362200 Sobic002G362200 Sobic003G325900--Sobic002G362200 Sobic003G045450 Sobic003G045450 Sobic003G325900--Sobic003G045450 Sobic003G325900--Sobic008G123200 Sobic006G088820 Sobic006G088820 Sobic003G325900--Sobic006G088820 Sobic003G412000 Sobic003G412000 Sobic003G325900--Sobic003G412000 Sobic008G068100 Sobic008G068100 Sobic003G336500--Sobic008G068100 Sobic003G336500--Sobic001G040600 Sobic009G191500 Sobic009G191500 Sobic003G336500--Sobic009G191500 Sobic003G336500--Sobic007G060600 Sobic001G199500 Sobic001G199500 Sobic003G336500--Sobic001G199500 Sobic001G483800 Sobic001G483800 Sobic003G336500--Sobic001G483800 Sobic005G088900 Sobic005G088900 Sobic003G336500--Sobic005G088900 Sobic009G176300 Sobic009G176300 Sobic003G336500--Sobic009G176300 Sobic008G100400 Sobic008G100400 Sobic003G336500--Sobic008G100400 Sobic010G106100--Sobic004G115700 Sobic010G106100--Sobic004G215100 Sobic010G106100--Sobic004G139900 Sobic010G106100--Sobic001G448000 Sobic010G106100--Sobic008G042200 Sobic010G106100--Sobic009G200000 Sobic003G350400 Sobic003G350400 Sobic010G106100--Sobic003G350400 Sobic008G190000 Sobic008G190000 Sobic010G106100--Sobic008G190000 Sobic004G311600 Sobic004G311600 Sobic010G106100--Sobic004G311600 Sobic009G200000--Sobic008G042200 Sobic009G200000--Sobic004G115700 Sobic009G200000--Sobic005G092700 Sobic009G200000--Sobic008G190000 Sobic006G240900 Sobic006G240900 Sobic009G200000--Sobic006G240900 Sobic009G207400 Sobic009G207400 Sobic009G200000--Sobic009G207400 Sobic001G075700 Sobic001G075700 Sobic009G200000--Sobic001G075700 Sobic001G244900 Sobic001G244900 Sobic009G200000--Sobic001G244900 Sobic005G125300 Sobic005G125300 Sobic009G200000--Sobic005G125300 Sobic004G192500 Sobic004G192500 Sobic010G175000--Sobic004G192500 Sobic010G257000 Sobic010G257000 Sobic010G175000--Sobic010G257000 Sobic006G226000 Sobic006G226000 Sobic010G175000--Sobic006G226000 Sobic009G188900 Sobic009G188900 Sobic010G175000--Sobic009G188900 Sobic006G281900 Sobic006G281900 Sobic010G175000--Sobic006G281900 Sobic006G275500 Sobic006G275500 Sobic010G175000--Sobic006G275500 Sobic006G016700 Sobic006G016700 Sobic010G175000--Sobic006G016700 Sobic002G168000 Sobic002G168000 Sobic010G175000--Sobic002G168000 Sobic002G055800 Sobic002G055800 Sobic010G175000--Sobic002G055800
Octagon: transcription factors


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