Gene annotation
Transcriptome id Sobic.001G240300.1
Synonym CAX7, Sb01g021270,
Functional annotation Ca exchanger (PubMedID : 22196357)
SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
sodium/calcium exchanger protein, putative, expressed
UniProt A0A1B6QKM5
Pfam PF01699
Panther DB PTHR12266 PTHR12266:SF10
NCBI CDD KOG2399; K+-dependent Na+:Ca2+ antiporter
KEGG Orthology K13754; SLC24A6, solute carrier family 24 (sodium/potassium/calcium exchanger), member 6
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT5G17860 : calcium exchanger 7
RAP-DB (Rice) LOC_Os10g30070.1 : sodium/calcium exchanger protein, putative, expressed
MaizeGDB (Corn) Zm00025a006836
Brachypodium KQJ96801
Barley HORVU5Hr1G006550.1 , HORVU2Hr1G020120.4 , HORVU2Hr1G020120.1 , HORVU2Hr1G020120.3 , HORVU2Hr1G020120.2 , HORVU5Hr1G006360.1 , HORVU5Hr1G006360.2 , HORVU5Hr1G006360.3
Wheat TraesCS2D02G119200 , TraesCS2D02G119200 , TraesCS2A02G116000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G213800 auxin-repressed protein, putative, expressed -
2 Sobic.003G258900 ZOS3-17 - C2H2 zinc finger protein, expressed K12827: SF3A3, SAP61, splicing factor 3A subunit 3
3 Sobic.006G194300 DUF581 domain containing protein, expressed -
4 Sobic.007G202800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K14684: solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41
5 Sobic.009G225200 expressed protein -
6 Sobic.009G015800 expressed protein -
7 Sobic.010G057300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
8 Sobic.001G498200 YT521-B-like family domain containing protein, expressed -
9 Sobic.007G007900 mago nashi, putative, expressed K12877: protein mago nashi
10 Sobic.005G015100 OsFBX291 - F-box domain containing protein, expressed -
11 Sobic.004G285800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transmembrane amino acid transporter protein, putative, expressed K14209: SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)
12 Sobic.005G085200 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
13 Sobic.006G047100 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
14 Sobic.009G046700 ranBP1 domain containing protein, expressed K15304: Ran-binding protein 3
15 Sobic.005G014950 - -
16 Sobic.008G078300 la domain containing protein, expressed K15191: La-related protein 7
17 Sobic.004G077000 expressed protein -
18 Sobic.003G442000 IPP transferase, putative, expressed K00791: miaA, tRNA dimethylallyltransferase
19 Sobic.004G332000 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, putative, expressed K00736: alpha-1,6-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
20 Sobic.005G182200 NBS-LRR disease resistance protein, putative, expressed K13457: RPM1, disease resistance protein RPM1


Gene co-expression network
sample Sobic001G240300 Sobic001G240300 Sobic002G213800 Sobic002G213800 Sobic001G240300--Sobic002G213800 Sobic003G258900 Sobic003G258900 Sobic001G240300--Sobic003G258900 Sobic006G194300 Sobic006G194300 Sobic001G240300--Sobic006G194300 Sobic007G202800 Sobic007G202800 Sobic001G240300--Sobic007G202800 Sobic009G225200 Sobic009G225200 Sobic001G240300--Sobic009G225200 Sobic009G015800 Sobic009G015800 Sobic001G240300--Sobic009G015800 Sobic010G057300 Sobic010G057300 Sobic001G240300--Sobic010G057300 Sobic001G498200 Sobic001G498200 Sobic001G240300--Sobic001G498200 Sobic007G007900 Sobic007G007900 Sobic001G240300--Sobic007G007900 Sobic004G345900 Sobic004G345900 Sobic002G213800--Sobic004G345900 Sobic001G277000 Sobic001G277000 Sobic002G213800--Sobic001G277000 Sobic002G331000 Sobic002G331000 Sobic002G213800--Sobic002G331000 Sobic007G189800 Sobic007G189800 Sobic002G213800--Sobic007G189800 Sobic010G270300 Sobic010G270300 Sobic002G213800--Sobic010G270300 Sobic008G124100 Sobic008G124100 Sobic002G213800--Sobic008G124100 Sobic010G057400 Sobic010G057400 Sobic002G213800--Sobic010G057400 Sobic003G400266 Sobic003G400266 Sobic002G213800--Sobic003G400266 Sobic005G085200 Sobic005G085200 Sobic002G213800--Sobic005G085200 Sobic002G396000 Sobic002G396000 Sobic003G258900--Sobic002G396000 Sobic002G158700 Sobic002G158700 Sobic003G258900--Sobic002G158700 Sobic003G267800 Sobic003G267800 Sobic003G258900--Sobic003G267800 Sobic006G102100 Sobic006G102100 Sobic003G258900--Sobic006G102100 Sobic001G081000 Sobic001G081000 Sobic003G258900--Sobic001G081000 Sobic006G226300 Sobic006G226300 Sobic003G258900--Sobic006G226300 Sobic003G442000 Sobic003G442000 Sobic003G258900--Sobic003G442000 Sobic003G258900--Sobic009G225200 Sobic009G046700 Sobic009G046700 Sobic003G258900--Sobic009G046700 Sobic006G194150 Sobic006G194150 Sobic006G194300--Sobic006G194150 Sobic008G126200 Sobic008G126200 Sobic006G194300--Sobic008G126200 Sobic002G324200 Sobic002G324200 Sobic006G194300--Sobic002G324200 Sobic001G028800 Sobic001G028800 Sobic006G194300--Sobic001G028800 Sobic009G183500 Sobic009G183500 Sobic006G194300--Sobic009G183500 Sobic009G178600 Sobic009G178600 Sobic006G194300--Sobic009G178600 Sobic006G184300 Sobic006G184300 Sobic006G194300--Sobic006G184300 Sobic003G305400 Sobic003G305400 Sobic006G194300--Sobic003G305400 Sobic010G042900 Sobic010G042900 Sobic006G194300--Sobic010G042900 Sobic007G120401 Sobic007G120401 Sobic007G202800--Sobic007G120401 Sobic005G209000 Sobic005G209000 Sobic007G202800--Sobic005G209000 Sobic007G189500 Sobic007G189500 Sobic007G202800--Sobic007G189500 Sobic001G087100 Sobic001G087100 Sobic007G202800--Sobic001G087100 Sobic007G202800--Sobic001G240300 Sobic009G154600 Sobic009G154600 Sobic007G202800--Sobic009G154600 Sobic007G202800--Sobic010G057300 Sobic006G228700 Sobic006G228700 Sobic007G202800--Sobic006G228700 Sobic010G083900 Sobic010G083900 Sobic007G202800--Sobic010G083900 Sobic009G117300 Sobic009G117300 Sobic009G225200--Sobic009G117300 Sobic009G117400 Sobic009G117400 Sobic009G225200--Sobic009G117400 Sobic005G015100 Sobic005G015100 Sobic009G225200--Sobic005G015100 Sobic001G043900 Sobic001G043900 Sobic009G225200--Sobic001G043900 Sobic009G225200--Sobic003G258900 Sobic004G271900 Sobic004G271900 Sobic009G225200--Sobic004G271900 Sobic004G348100 Sobic004G348100 Sobic009G225200--Sobic004G348100 Sobic009G225200--Sobic003G442000 Sobic009G225200--Sobic009G015800 Sobic009G015800--Sobic005G015100 Sobic009G015800--Sobic009G225200 Sobic002G259800 Sobic002G259800 Sobic009G015800--Sobic002G259800 Sobic009G015800--Sobic002G158700 Sobic002G421700 Sobic002G421700 Sobic009G015800--Sobic002G421700 Sobic009G015800--Sobic001G087100 Sobic004G232000 Sobic004G232000 Sobic009G015800--Sobic004G232000 Sobic005G015900 Sobic005G015900 Sobic009G015800--Sobic005G015900 Sobic001G315100 Sobic001G315100 Sobic009G015800--Sobic001G315100 Sobic010G057300--Sobic005G085200 Sobic004G285800 Sobic004G285800 Sobic010G057300--Sobic004G285800 Sobic010G057300--Sobic004G345900 Sobic010G057300--Sobic010G057400 Sobic004G199600 Sobic004G199600 Sobic010G057300--Sobic004G199600 Sobic009G180100 Sobic009G180100 Sobic010G057300--Sobic009G180100 Sobic010G057300--Sobic010G270300 Sobic005G085600 Sobic005G085600 Sobic010G057300--Sobic005G085600 Sobic010G057300--Sobic007G189800 Sobic004G256600 Sobic004G256600 Sobic001G498200--Sobic004G256600 Sobic001G028900 Sobic001G028900 Sobic001G498200--Sobic001G028900 Sobic010G248600 Sobic010G248600 Sobic001G498200--Sobic010G248600 Sobic001G498200--Sobic010G270300 Sobic003G113200 Sobic003G113200 Sobic001G498200--Sobic003G113200 Sobic001G498200--Sobic005G015100 Sobic006G128900 Sobic006G128900 Sobic001G498200--Sobic006G128900 Sobic001G498200--Sobic009G117300 Sobic007G031800 Sobic007G031800 Sobic001G498200--Sobic007G031800 Sobic001G428400 Sobic001G428400 Sobic007G007900--Sobic001G428400 Sobic003G045400 Sobic003G045400 Sobic007G007900--Sobic003G045400 Sobic003G142700 Sobic003G142700 Sobic007G007900--Sobic003G142700 Sobic001G429400 Sobic001G429400 Sobic007G007900--Sobic001G429400 Sobic010G055500 Sobic010G055500 Sobic007G007900--Sobic010G055500 Sobic006G038400 Sobic006G038400 Sobic007G007900--Sobic006G038400 Sobic002G392600 Sobic002G392600 Sobic007G007900--Sobic002G392600 Sobic001G149700 Sobic001G149700 Sobic007G007900--Sobic001G149700 Sobic010G000700 Sobic010G000700 Sobic007G007900--Sobic010G000700
Octagon: transcription factors


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