Gene annotation
Transcriptome id Sobic.001G240850.1
Synonym -
Functional annotation -
UniProt A0A1B6QKQ3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G210700 pentatricopeptide repeat domain containing protein, putative, expressed -
2 Sobic.002G088800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
3 Sobic.001G182000 MBTB51 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
4 Sobic.010G066900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
5 Sobic.001G212200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@LOI1, putative, expressed -
6 Sobic.009G253200 RNA polymerase sigma factor, putative, expressed -
7 Sobic.005G011000 Rf1, mitochondrial precursor, putative, expressed -
8 Sobic.006G075450 - -
9 Sobic.008G075100 hhH-GPD superfamily base excision DNA repair protein, putative, expressed K03575: A/G-specific adenine glycosylase
10 Sobic.001G149100 vegetative storage protein, putative, expressed -
11 Sobic.005G123900 ATP binding protein, putative, expressed K17592: sacsin
12 Sobic.008G009000 pentatricopeptide, putative, expressed -
13 Sobic.002G267600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
14 Sobic.006G072501 - -
15 Sobic.010G092801 - -
16 Sobic.008G110900 E2F-related protein, putative, expressed -
17 Sobic.004G217900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide domain containing protein, putative, expressed -
18 Sobic.004G176500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
19 Sobic.002G251800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
20 Sobic.010G099300 - K03501: gidB, 16S rRNA (guanine527-N7)-methyltransferase


Gene co-expression network
sample Sobic001G240850 Sobic001G240850 Sobic005G210700 Sobic005G210700 Sobic001G240850--Sobic005G210700 Sobic002G088800 Sobic002G088800 Sobic001G240850--Sobic002G088800 Sobic001G182000 Sobic001G182000 Sobic001G240850--Sobic001G182000 Sobic010G066900 Sobic010G066900 Sobic001G240850--Sobic010G066900 Sobic001G212200 Sobic001G212200 Sobic001G240850--Sobic001G212200 Sobic009G253200 Sobic009G253200 Sobic001G240850--Sobic009G253200 Sobic005G011000 Sobic005G011000 Sobic001G240850--Sobic005G011000 Sobic006G075450 Sobic006G075450 Sobic001G240850--Sobic006G075450 Sobic008G075100 Sobic008G075100 Sobic001G240850--Sobic008G075100 Sobic008G099900 Sobic008G099900 Sobic005G210700--Sobic008G099900 Sobic009G155400 Sobic009G155400 Sobic005G210700--Sobic009G155400 Sobic009G116400 Sobic009G116400 Sobic005G210700--Sobic009G116400 Sobic006G085900 Sobic006G085900 Sobic005G210700--Sobic006G085900 Sobic007G179600 Sobic007G179600 Sobic005G210700--Sobic007G179600 Sobic001G347100 Sobic001G347100 Sobic005G210700--Sobic001G347100 Sobic008G066900 Sobic008G066900 Sobic005G210700--Sobic008G066900 Sobic006G069100 Sobic006G069100 Sobic005G210700--Sobic006G069100 Sobic005G210700--Sobic005G011000 Sobic002G385200 Sobic002G385200 Sobic002G088800--Sobic002G385200 Sobic002G088800--Sobic005G210700 Sobic001G001200 Sobic001G001200 Sobic002G088800--Sobic001G001200 Sobic003G051500 Sobic003G051500 Sobic002G088800--Sobic003G051500 Sobic002G088800--Sobic005G011000 Sobic003G128000 Sobic003G128000 Sobic002G088800--Sobic003G128000 Sobic006G099600 Sobic006G099600 Sobic002G088800--Sobic006G099600 Sobic002G088800--Sobic001G240850 Sobic010G085000 Sobic010G085000 Sobic002G088800--Sobic010G085000 Sobic008G030400 Sobic008G030400 Sobic001G182000--Sobic008G030400 Sobic001G182000--Sobic009G253200 Sobic001G182000--Sobic005G011000 Sobic005G148400 Sobic005G148400 Sobic001G182000--Sobic005G148400 Sobic004G325300 Sobic004G325300 Sobic001G182000--Sobic004G325300 Sobic005G123900 Sobic005G123900 Sobic001G182000--Sobic005G123900 Sobic002G355600 Sobic002G355600 Sobic001G182000--Sobic002G355600 Sobic010G252000 Sobic010G252000 Sobic001G182000--Sobic010G252000 Sobic004G166301 Sobic004G166301 Sobic001G182000--Sobic004G166301 Sobic001G149100 Sobic001G149100 Sobic010G066900--Sobic001G149100 Sobic004G176500 Sobic004G176500 Sobic010G066900--Sobic004G176500 Sobic009G238700 Sobic009G238700 Sobic010G066900--Sobic009G238700 Sobic008G163400 Sobic008G163400 Sobic010G066900--Sobic008G163400 Sobic004G241000 Sobic004G241000 Sobic010G066900--Sobic004G241000 Sobic003G299200 Sobic003G299200 Sobic010G066900--Sobic003G299200 Sobic003G239000 Sobic003G239000 Sobic010G066900--Sobic003G239000 Sobic010G066900--Sobic001G347100 Sobic007G123100 Sobic007G123100 Sobic010G066900--Sobic007G123100 Sobic002G251800 Sobic002G251800 Sobic001G212200--Sobic002G251800 Sobic001G212200--Sobic006G069100 Sobic001G040600 Sobic001G040600 Sobic001G212200--Sobic001G040600 Sobic001G212200--Sobic001G149100 Sobic002G167400 Sobic002G167400 Sobic001G212200--Sobic002G167400 Sobic010G099300 Sobic010G099300 Sobic001G212200--Sobic010G099300 Sobic003G322200 Sobic003G322200 Sobic001G212200--Sobic003G322200 Sobic001G212200--Sobic009G238700 Sobic001G212200--Sobic001G347100 Sobic006G271900 Sobic006G271900 Sobic009G253200--Sobic006G271900 Sobic009G253200--Sobic008G099900 Sobic009G253200--Sobic002G251800 Sobic007G038700 Sobic007G038700 Sobic009G253200--Sobic007G038700 Sobic009G253200--Sobic005G148400 Sobic009G253200--Sobic001G001200 Sobic006G099501 Sobic006G099501 Sobic009G253200--Sobic006G099501 Sobic009G253200--Sobic005G210700 Sobic005G028300 Sobic005G028300 Sobic009G253200--Sobic005G028300 Sobic005G011000--Sobic006G271900 Sobic005G011000--Sobic009G116400 Sobic004G036700 Sobic004G036700 Sobic005G011000--Sobic004G036700 Sobic005G011000--Sobic001G347100 Sobic005G011000--Sobic005G210700 Sobic001G187800 Sobic001G187800 Sobic005G011000--Sobic001G187800 Sobic003G419800 Sobic003G419800 Sobic005G011000--Sobic003G419800 Sobic002G389200 Sobic002G389200 Sobic005G011000--Sobic002G389200 Sobic005G011000--Sobic005G028300 Sobic006G075450--Sobic003G239000 Sobic006G075450--Sobic008G163400 Sobic002G267600 Sobic002G267600 Sobic006G075450--Sobic002G267600 Sobic006G075450--Sobic005G011000 Sobic006G075450--Sobic008G066900 Sobic006G075450--Sobic009G116400 Sobic010G123700 Sobic010G123700 Sobic006G075450--Sobic010G123700 Sobic009G013900 Sobic009G013900 Sobic006G075450--Sobic009G013900 Sobic006G072501 Sobic006G072501 Sobic006G075450--Sobic006G072501 Sobic003G444300 Sobic003G444300 Sobic008G075100--Sobic003G444300 Sobic008G113300 Sobic008G113300 Sobic008G075100--Sobic008G113300 Sobic009G087300 Sobic009G087300 Sobic008G075100--Sobic009G087300 Sobic007G006800 Sobic007G006800 Sobic008G075100--Sobic007G006800 Sobic009G192700 Sobic009G192700 Sobic008G075100--Sobic009G192700 Sobic001G083300 Sobic001G083300 Sobic008G075100--Sobic001G083300 Sobic003G153900 Sobic003G153900 Sobic008G075100--Sobic003G153900 Sobic001G105800 Sobic001G105800 Sobic008G075100--Sobic001G105800 Sobic009G184200 Sobic009G184200 Sobic008G075100--Sobic009G184200
Octagon: transcription factors


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